KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:07 2014 Check: 00 .. Name: ENSP00000361158/1-571 Len: 613 Check: 2338 Weight: 1.00 Name: ENSBTAP00000014930/1-573 Len: 613 Check: 9996 Weight: 1.00 Name: bmy_07231T0/1-489 Len: 613 Check: 9026 Weight: 1.00 Name: BACU019506/1-572 Len: 613 Check: 978 Weight: 1.00 Name: ENSTTRP00000008378/1-572 Len: 613 Check: 83 Weight: 1.00 // 1 50 ENSP00000361158/1-571 MDRSKRNSIA GFPPRVERLE EFEGGGGGEG NVSQVGRVWP SSYRALISAF ENSBTAP00000014930/1-573 MDRSKRNSIA GFPPRVERLE DFEGGGGGDG NMTQVGRIWP SSYRALISAF bmy_07231T0/1-489 ---------L GFP------- ---------- ---------- ---------- BACU019506/1-572 MDRSKRNSIA GFPPRVERLE DFEGGGGGDG SMTQVGRVWP SSYRALISAF ENSTTRP00000008378/1-572 MDRSKRNSIA GFPPRVERLE DFEGGGGGDG NMTQVGRVWP SSYRALISAF 51 100 ENSP00000361158/1-571 SRLTRLDDFT CEKIGSGFFS EVFKVRHRAS GQVMALKMNT LSSNRANMLK ENSBTAP00000014930/1-573 SRLTRLDDFT CEKIGSGFFS EVFKVRHRAS GQVMALKMNT LSSNRANMLK bmy_07231T0/1-489 ---------- ---------- ---------- ---------- ---------- BACU019506/1-572 SRLTRLDDFT CEKIGSGFFS EVFKVRHRAS GQVMALKMNT LSSNRANMLK ENSTTRP00000008378/1-572 SRLTRLDDFT CEKIGSGFFS EVFKVRHRAS GQVMALKMNT LSSNRANMLK 101 150 ENSP00000361158/1-571 EVQLMNRLSH PNILRFMGVC VHQGQLHALT EYINSGNLEQ LLDSNLHLPW ENSBTAP00000014930/1-573 EVQLMNRLSH PNILRFMGVC VHQGQLHALT EYINSGNLEQ LLDSNLHLPW bmy_07231T0/1-489 ---------- ---------- -------SVL QYINSGNLEQ LLDSNLHLPW BACU019506/1-572 EVQLMNRLSH PNILRFMGVC VHQGQLHALT EYINSGNLEQ LLDSNLHLPW ENSTTRP00000008378/1-572 EVQLMNRLSH PNILRFMGVC VHQGQLHALT EYINSGNLEQ LLDSNLHLPW 151 200 ENSP00000361158/1-571 TVRVKLAYDI AVGLSYLHFK GIFHRDLTSK NCLIKRDENG YSAVVADFGL ENSBTAP00000014930/1-573 TVRVKLAYDI AVGLSYLHFK GIFHRDLTSK NCLIKRDENG YSAVVADFGL bmy_07231T0/1-489 TVRVKLAYDI AVGLSYLHFK GIFHRDLTSK NCLIKRDENG YSAVVGDFGL BACU019506/1-572 TVRVKLAYDI AVGLSYLHFK GIFHRDLTSK NCLIKRDENG YSAVVGDFGL ENSTTRP00000008378/1-572 TVRVKLAYDI AVGLSYLHFK GIFHRDLTSK NCLIKRDENG YSAVVGDFGL 201 250 ENSP00000361158/1-571 AEKIPDVSMG SEKLAVVGSP FWMAPEVLRD EPYNEKADVF SYGIILCEII ENSBTAP00000014930/1-573 AEKIPDISTG GEKLAVVGSP FWMAPEVLRD EPYNEKADVF SYGIILCEII bmy_07231T0/1-489 AEKIPDVSMG SEKLAVVGSP FWMAPEVLRD EPYNEKADVF SYGIILCEII BACU019506/1-572 AEKIPDVSMG SEKLAVVGSP FWMAPEVLRD EPYNEKADVF SYGIILCEII ENSTTRP00000008378/1-572 AEKIPDVSMG SEKLAVVGSP FWMAPEVLRD EPYNEKADVF SYGIILCEII 251 300 ENSP00000361158/1-571 ARIQADPDYL PRTENFGLDY DAFQHMVGDC PPDFLQLTFN CCN------- ENSBTAP00000014930/1-573 ARIQADPDYL PRTENFGLDY DAFQHMVGDC PPDFLQLTFN CCN------- bmy_07231T0/1-489 ARIQADPDYL PRTENFGLDY DAFQHMVGDC PPDFLQLTFN CCNACQTLVQ BACU019506/1-572 ARIQADPDYL PRTENFGLDY DAFQHMVGDC PPDFLQLTFN CCN------- ENSTTRP00000008378/1-572 ARIQADPDYL PRTENFGLDY DAFQHMVGDC PPDFLQLTFN CCN------- 301 350 ENSP00000361158/1-571 ---------- ---------- ---------- ---MDPKLRP SFVEIGKTLE ENSBTAP00000014930/1-573 ---------- ---------- ---------- ---MDPKLRP SFVEIGKTLE bmy_07231T0/1-489 SLGPRKGKLL SIILSSACSV DLPPLALDID GALMDPKLRP SFVEIGKILE BACU019506/1-572 ---------- ---------- ---------- ---MDPKLRP SFVEIGKILE ENSTTRP00000008378/1-572 ---------- ---------- ---------- ---MDPKLRP SFVEIGKILE 351 400 ENSP00000361158/1-571 EILSRLQEEE QERDRKLQPT ARGLLEKAPG VKRLSSLDDK IPHKSPCPRR ENSBTAP00000014930/1-573 EILSRLQEEE LERDRKLQPT AKGLLEKGPG VKRLSLLDDK IPPKSPRPRR bmy_07231T0/1-489 EILSRLQEEE LERDRKLQST AKGLLEKGPG VKRLSLLDDK IPPKSPRPRR BACU019506/1-572 EILSRLQEEE LERDRKLQST AKGFLEKGPG VKRLSLLDDK IPPKSPRPRR ENSTTRP00000008378/1-572 EILSRLEEEE LERDRKLQST AKGLLEKGPG VKRLSLLDDK IPPKSPRPRR 401 450 ENSP00000361158/1-571 TIWLSRSQSD IFSRKPPRTV SVLDPYYRP- RDGAARTPKV NPFSARQDLM ENSBTAP00000014930/1-573 TIWLSRSQSD IFSNKPPRTV NVLDPYYQPQ RVGAARAPKI NPFSARQDLK bmy_07231T0/1-489 TIWLSRSQSD IFSSKPPRTV NVLDPYYQPQ RGDAARAPKI NPFSARQDLK BACU019506/1-572 TVWLSRSQSD IFSSKPPRTV NVLDPYYQPQ RGDAARAPKI NPFSARQDLK ENSTTRP00000008378/1-572 TIWLSRSQSD IFSSKPPRTV NVLDPYYQPQ RGDAARAPKI NPFSARQDLK 451 500 ENSP00000361158/1-571 GGKIKFFDLP SKSVISLVFD LDAPGPGTMP LADWQEPLAP PIRRWRSLPG ENSBTAP00000014930/1-573 GGKIKFFDLP SKSVISLVFD LDAPGPGTIP MADWQEPLGP PARRWRSLPS bmy_07231T0/1-489 GGKXKFFDLP SKSVISLVFD LDAPGPGTMP MADWQEPLAP PVRRWRSLPS BACU019506/1-572 GGKVKFFDLP SKSVISLVFD LDAPGPGTMS MADWQEPLAP PVRRWRSLPS ENSTTRP00000008378/1-572 GGKVKFFDLP SKSVISLVFD LDAPGPGTMP MADWQEPLAP PVRRWRSLPS 501 550 ENSP00000361158/1-571 SPEFLHQEAC PFVGREESLS DGPPPRLSSL KYRVKEIPPF RASALPAAQA ENSBTAP00000014930/1-573 SPEFLHQEAC PFVGREESLS DGPPPRLSSH KYRVREIPPF RASAQPAAPA bmy_07231T0/1-489 SPEFLHQEAC PFMGREESLS DGPLPRLSSH KYRVREIPPF RASALPAAPA BACU019506/1-572 SPEFLHQEAC PFMGREESLS DGPLPRLSSH KYRVREIPPF RASALPAAPA ENSTTRP00000008378/1-572 SPEFLHQEAC PFVGREESLS DGPLPRLSSH KYRVREIPPF RASALPAAPA 551 600 ENSP00000361158/1-571 HEAMDCSILQ EENGFGSRPQ GTSPCPAGAS EEMEV-EERP AGSTPATFST ENSBTAP00000014930/1-573 HEAMDCSNAQ EENGFGPRPQ GVSPCLAGAP EEMEVEEERP RDLAPVPFSV bmy_07231T0/1-489 HEAMDCSSPQ EKNGFGPRSQ GASPCLAGAS EEMEV-EERP RDLAPVPFSV BACU019506/1-572 HEAMDCSSPQ EKNGFGPRSQ GASPCLAGAS EEMEV-EERP RDLAPVPFSV ENSTTRP00000008378/1-572 HEAMDCSSPQ EENGFGPRSQ GASPCLAGAP EEMEV-EERP RDLAPVPFSV 601 650 ENSP00000361158/1-571 SGIGLQTQGK QDG ENSBTAP00000014930/1-573 SGMGLRTQGE QDG bmy_07231T0/1-489 SGIGLKTQGE QDG BACU019506/1-572 SGIGLKTQGE QDG ENSTTRP00000008378/1-572 SGIGLKTQGE LDG