KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:08 2014 Check: 00 .. Name: BACU016473/1-582 Len: 795 Check: 7546 Weight: 1.00 Name: bmy_02130T0/1-671 Len: 795 Check: 5162 Weight: 1.00 Name: ENSBTAP00000014933/1-633 Len: 795 Check: 5450 Weight: 1.00 Name: ENSP00000386200/1-740 Len: 795 Check: 5252 Weight: 1.00 Name: ENSTTRP00000005254/1-732 Len: 795 Check: 1178 Weight: 1.00 // 1 50 BACU016473/1-582 ---------- ---------- ---------- ---------- ---------- bmy_02130T0/1-671 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014933/1-633 ---------- ---------- ---------- ---------- ---------- ENSP00000386200/1-740 MMQESATETI SNSSMNQNGM STLSSQLDAG SRDGRSSGDT SSEVSTVELL ENSTTRP00000005254/1-732 MMQESATETI SNSSMNQNGM STLSSQLDAG SRDGRSSGDT SSEVSTVELL 51 100 BACU016473/1-582 ---------- ---------- ---------- ---------- ---------- bmy_02130T0/1-671 --MLCRRISH ETDLWFFNSC AEQRRKFKVD ECRSEEFLL- ---------- ENSBTAP00000014933/1-633 ---------- ---------- ---------- ---------- ---------- ENSP00000386200/1-740 HLQQQQALQA ARQLLLQQQT SGLKSPKSSD KQRPLQELLP ETKLCICGHS ENSTTRP00000005254/1-732 HLQQQQALQA ARQLLLQQQT SGLKSPKSSD KQRPLQELLP ETKLCVCGHS 101 150 BACU016473/1-582 -----PSVSV KVPVSVAMMT PQVITPQQMQ QILQQQVLSP QQLQALLQQQ bmy_02130T0/1-671 -----VWFIA AVPVSVAMMT PQVITPQQMQ QILQQQVLSP QQLQALLQQQ ENSBTAP00000014933/1-633 ---------I KVPVSVAMMT PQVITPQQMQ QILQQQVLSP QQLQALLQQQ ENSP00000386200/1-740 SGDGHPHNTF AVPVSVAMMT PQVITPQQMQ QILQQQVLSP QQLQALLQQQ ENSTTRP00000005254/1-732 SGDGHPHNTF AVPVSVAMMT PQVITPQQMQ QILQQQVLSP QQLQALLQQQ 151 200 BACU016473/1-582 QAVMLQQPLF HPL------- ---------- ---------- ---------- bmy_02130T0/1-671 QAVMLQQQQL QEFYKKQQEQ LHLQLLQQQQ QQQQQQQQQQ QQQQQQQ--- ENSBTAP00000014933/1-633 QAVMLQQQQL QEFYKKQQEQ LESKQKSSSM QRSARLGRAQ RGQQTASNIN ENSP00000386200/1-740 QAVMLQQQQL QEFYKKQQEQ LHLQLLQQQQ QQQQQQQQQQ QQQQQQQQQQ ENSTTRP00000005254/1-732 QAVMLQQQQL QEFYKKQQEQ LHLQLLQQQQ QQQQQQQQQQ QQQQQQ---- 201 250 BACU016473/1-582 ---------- ---------- ---------- SMQVPRFSVA VLIFERKATR bmy_02130T0/1-671 --QQQQQQQQ QQQQQQPQHP GKQAKE---- QQQQQQLAAQ QLVFQQQLLQ ENSBTAP00000014933/1-633 IIQTKHVEVV KLISRYQSCC LQAAHYANVQ QQQQQQLAAQ QLVFQQQLLQ ENSP00000386200/1-740 --QQQQQQQQ QQQQQQQQHP GKQAKEQQQQ QQQQQQLAAQ QLVFQQQLLQ ENSTTRP00000005254/1-732 --QQQQQQQQ QQQQQQQQHP GKQAKE---- QQQQQQLAAQ QLVFQQQLLQ 251 300 BACU016473/1-582 NLEL---AHI LPLSFDNGMT IRKRTGAMKE AKISFGVLHA ENSINE---- bmy_02130T0/1-671 MQQLQQQQHL LSLQRQGLIS IPPGQAALPV QSLPQGSSET GIMVATGEEY ENSBTAP00000014933/1-633 MQQLQQQQHL LSLQRQGLIS IPPGQAALPV QSLPQ----- ---------- ENSP00000386200/1-740 MQQLQQQQHL LSLQRQGLIS IPPGQAALPV QSLPQ----- ---------- ENSTTRP00000005254/1-732 MQQLQQQQHL LSLQRQGLIS IPPGQAALPV QSLPQ----- ---------- 301 350 BACU016473/1-582 ---------- -LKFEAGLSP AEIQQLWKEV TGVHSMEDNG IKHGGLDLTT bmy_02130T0/1-671 WGPRGQGCGA FFHFIAGLSP AEIQQLWKEV TGVHSMEDNG IKHGGLDLTT ENSBTAP00000014933/1-633 ---------- -----AGLSP AEIQQLWKEV TGVHSMEDNG IKHGGLDLTT ENSP00000386200/1-740 ---------- -----AGLSP AEIQQLWKEV TGVHSMEDNG IKHGGLDLTT ENSTTRP00000005254/1-732 ---------- -----AGLSP AEIQQLWKEV TGVHSMEDNG IKHGGLDLTT 351 400 BACU016473/1-582 NNSSSTTSPT ASKASPPITH HSMVNGQSSV LNARRDSSSH EETGASHTLY bmy_02130T0/1-671 NNSSSTTSPT ASKASPPITH HSMVNGQSSV LNARRDSSSH EETGASHTLY ENSBTAP00000014933/1-633 NNSSSTTSST TSKASPPITH HTIVNGQSSV LNARRDSSSH EETGASHTLY ENSP00000386200/1-740 NNSSSTTSSN TSKASPPITH HSIVNGQSSV LSARRDSSSH EETGASHTLY ENSTTRP00000005254/1-732 NNSSSTTSPT ASKASPPITH HSMVNGQSSV LNARRDSSSH EETGASHTLY 401 450 BACU016473/1-582 GHGVCKWPGC ESICEDFGQF LKHLNNEHAL DDRSTAQCRV QMQVVQQLEI bmy_02130T0/1-671 GHGVCKWPGC ESICEDFGQF LKHLNNEHAL DDRSTAQCRV QMQVVQQLEI ENSBTAP00000014933/1-633 GHGVCKWPGC ESICEDFGQF LKHLNNEHAL DDRSTAQCRV QMQVVQQLEI ENSP00000386200/1-740 GHGVCKWPGC ESICEDFGQF LKHLNNEHAL DDRSTAQCRV QMQVVQQLEI ENSTTRP00000005254/1-732 GHGVCKWPGC ESICEDFGQF LKHLNNEHAL DDRSTAQCRV QMQVVQQLEI 451 500 BACU016473/1-582 QLSKERERLQ AMMTHLHMRP SEPKPSPKPL NLVSSVTMSK NMLETSPQSL bmy_02130T0/1-671 QLSKERERLQ AMMTHLHMRP SEPKPSPKPL NLVSSVTMSK NMLETSPQSL ENSBTAP00000014933/1-633 QLSKERERLQ AMMTHLHMRP SEPKPSPKPL NLVSSVTMSK NMLETSPQSL ENSP00000386200/1-740 QLSKERERLQ AMMTHLHMRP SEPKPSPKPL NLVSSVTMSK NMLETSPQSL ENSTTRP00000005254/1-732 QLSKERERLQ AMMTHLHMRP SEPKPSPKPL NLVSSVTMSK NMLETSPQSL 501 550 BACU016473/1-582 PQTPTTPTAP VTPITQGPSV ITPASVPNVG AIRRRHSDKY NIPMSSEIAP bmy_02130T0/1-671 PQTPTTPTAP VTPITQGPSV ITPASVPNVG AIRRRHSDKY NIPMSSEIAP ENSBTAP00000014933/1-633 PQTPTTPTAP VTPITQGPSV ITPASVPNVG AIRRRHSDKY NIPMSSEIAP ENSP00000386200/1-740 PQTPTTPTAP VTPITQGPSV ITPASVPNVG AIRRRHSDKY NIPMSSEIAP ENSTTRP00000005254/1-732 PQTPTTPTAP VTPITQGPSV ITPASVPNVG AIRRRHSDKY NIPMSSEIAP 551 600 BACU016473/1-582 NYEFYKNADV RPPFTYATLI RQAIMESSDR QLTLNEIYSW FTRTFAYFRR bmy_02130T0/1-671 NYEFYKNADV RPPFTYATLI RQAIMESSDR QLTLNEIYSW FTRTFAYFRR ENSBTAP00000014933/1-633 NYEFYKNADV RPPFTYATLI RQAIMESSDR QLTLNEIYSW FTRTFAYFRR ENSP00000386200/1-740 NYEFYKNADV RPPFTYATLI RQAIMESSDR QLTLNEIYSW FTRTFAYFRR ENSTTRP00000005254/1-732 NYEFYKNADV RPPFTYATLI RQAIMESSDR QLTLNEIYSW FTRTFAYFRR 601 650 BACU016473/1-582 NAATWKNAVR HNLSLHKCFV RVENVKGAVW TVDEVEYQKR RSQKITG--S bmy_02130T0/1-671 NAATWKNAVR HNLSLHKCFV RVENVKGAVW TVDEVEYQKR RSQKITGYVC ENSBTAP00000014933/1-633 NAATWKNAVR HNLSLHKCFV RVENVKGAVW TVDEVEYQKR RSQKITG--S ENSP00000386200/1-740 NAATWKNAVR HNLSLHKCFV RVENVKGAVW TVDEVEYQKR RSQKITG--S ENSTTRP00000005254/1-732 NAATWKNAVR HNLSLHKCFV RVENVKGAVW TVDEVEYQKR RSQKITG--S 651 700 BACU016473/1-582 PTLVK---NI PTSLGYGAAL NAS------- ---------- -LQAALAESS bmy_02130T0/1-671 DSFVKPKPNL SKKYTYQFRL WSSSECQLAG EIVIILNSWF IIQAALAESS ENSBTAP00000014933/1-633 PTLVK---NI PTSLGYGAAL NAS------- ---------- -LQAALAESS ENSP00000386200/1-740 PTLVK---NI PTSLGYGAAL NAS------- ---------- -LQAALAESS ENSTTRP00000005254/1-732 PTLVK---NI PTSLGYGAAL NAS------- ---------- -LQAALAESS 701 750 BACU016473/1-582 LPLLSNPGLI NNTSSGLLQA VHEDLNGSLD HIDSNGNSSP GCSPQPHIHS bmy_02130T0/1-671 LPLLSNPGLI NNTSSGLLQA VHEDLNGSLD HIDSNGNSSP GCSPQPHM-- ENSBTAP00000014933/1-633 LPLLSNPGLI NNASSGLLQA VHEDLNGSLD HIDSNGNSSP GCSPQPHIHS ENSP00000386200/1-740 LPLLSNPGLI NNASSGLLQA VHEDLNGSLD HIDSNGNSSP GCSPQPHIHS ENSTTRP00000005254/1-732 LPLLSNPGLI NNTSSGLLQA VHEDLNGSLD HIDSNGNSSP GCSPQPHIHS 751 800 BACU016473/1-582 IHVKEEPVIA EDEDCPMSLV TTANHSPELE DDREIEEEPL SEDLE bmy_02130T0/1-671 ---------- ---------- ---------- ---------- ----- ENSBTAP00000014933/1-633 IHVKEEPVIA EDEDCPMSLV TTANHSPELE DDREIEEEPL SEDLE ENSP00000386200/1-740 IHVKEEPVIA EDEDCPMSLV TTANHSPELE DDREIEEEPL SEDLE ENSTTRP00000005254/1-732 IHVKEEPVIA EDEDCPMSLV TTANHSPELE DDREIEEEPL SEDLE