KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:11 2014 Check: 00 .. Name: BACU003733/1-748 Len: 1136 Check: 1186 Weight: 1.00 Name: ENSP00000376132/1-1136 Len: 1136 Check: 6141 Weight: 1.00 Name: bmy_21157T0/1-899 Len: 1136 Check: 2529 Weight: 1.00 Name: ENSBTAP00000014951/1-1136 Len: 1136 Check: 5500 Weight: 1.00 Name: ENSTTRP00000004198/1-1102 Len: 1136 Check: 1274 Weight: 1.00 // 1 50 BACU003733/1-748 MAKMEVKTSL LDNMIGVGDM VLLEPLNEET VINNLKKRFD HNEIYTYIGS ENSP00000376132/1-1136 MAKMEVKTSL LDNMIGVGDM VLLEPLNEET FINNLKKRFD HSEIYTYIGS bmy_21157T0/1-899 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014951/1-1136 MAKMEVKTSL LDNMIGVGDM VLLEPLSEDT VIDNLKKRFD HNEIYTYIGS ENSTTRP00000004198/1-1102 ---------- ---------- ---------- --NNLKKRFD HNEIYTYIGS 51 100 BACU003733/1-748 VVISVNPYRS LPIYSPEKVE DYRNRNFYEL SPHIFALSDE AYRSLRDQDK ENSP00000376132/1-1136 VVISVNPYRS LPIYSPEKVE EYRNRNFYEL SPHIFALSDE AYRSLRDQDK bmy_21157T0/1-899 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014951/1-1136 VVISVNPYRS LPIYSPEKVE DYRNRNFYEL SPHIFALSDE AYRSLRDQDK ENSTTRP00000004198/1-1102 VVISVNPYRS LPIYSPEKVE DYRNRNFYEL SPHIFALSDE AYRSLRDQDK 101 150 BACU003733/1-748 DQCILITGES GAGKTEASKL VMSYVAAVCG KGAEVNQVKE QLLQSNPVLE ENSP00000376132/1-1136 DQCILITGES GAGKTEASKL VMSYVAAVCG KGAEVNQVKE QLLQSNPVLE bmy_21157T0/1-899 -MC------- ---------- ---------- ---------- ---------- ENSBTAP00000014951/1-1136 DQCILITGES GAGKTEASKL VMSYVAAVCG KGAEVNQVKE QLLQSNPVLE ENSTTRP00000004198/1-1102 DQCILITGES GAGKTEASKL VMSYVAAVCG KGAEVNQVKE QLLQSNPVLE 151 200 BACU003733/1-748 AFGNAKTVRN DNSSRFGKYM DIEFDFKGDP LGGVISNYLL EKSRVVKQPR ENSP00000376132/1-1136 AFGNAKTVRN DNSSRFGKYM DIEFDFKGDP LGGVISNYLL EKSRVVKQPR bmy_21157T0/1-899 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014951/1-1136 AFGNAKTVRN DNSSRFGKYM DIEFDFKGDP LGGVISNYLL EKSRVVKQPR ENSTTRP00000004198/1-1102 AFGNAKTVRN DNSSRFGKYM DIEFDFKGDP LGGVISNYLL EKSRVVKQPR 201 250 BACU003733/1-748 GERNFHVFYQ LLSGASEELL NKLKLERDFS RYNYLSLDSA KVNGVDDAAN ENSP00000376132/1-1136 GERNFHVFYQ LLSGASEELL NKLKLERDFS RYNYLSLDSA KVNGVDDAAN bmy_21157T0/1-899 ---------- -------DSI DKLKLERDFS RYNYLSLDSA KVNGVDDAAN ENSBTAP00000014951/1-1136 GERNFHVFYQ LLSGASEELL NKLKLERDFS RYNYLSLDSA KVNGVDDAAN ENSTTRP00000004198/1-1102 GERNFHVFYQ LLSGASEELL NKLKLERDFS RYNYLSLDSA KVNGVDDAAN 251 300 BACU003733/1-748 FRTVRNAMQI VGFMDHEVES VLEVVAAVLK LGNIEFKPES RVNGLDESKI ENSP00000376132/1-1136 FRTVRNAMQI VGFMDHEAES VLAVVAAVLK LGNIEFKPES RVNGLDESKI bmy_21157T0/1-899 FRTVRNAMQI VGFMDHEVES VLEVVAAVLK LGNIEFKPES RVNGLDESKI ENSBTAP00000014951/1-1136 FRTVRNAMQI VGFMDHEAES VLEVVAAVLK LGNIEFKPES RVNGLDESKI ENSTTRP00000004198/1-1102 FRTVRNAMQI VGFMDHEVES VLEVVAAVLK LGNIEFKPES RVNGLDESKI 301 350 BACU003733/1-748 KDKNELKEIC ELTGIDQSVL ERAFSFRTVE AKQEKVSTTL NVAQAYYARD ENSP00000376132/1-1136 KDKNELKEIC ELTGIDQSVL ERAFSFRTVE AKQEKVSTTL NVAQAYYARD bmy_21157T0/1-899 KDKNELKEIC ELTGIDQSVL ERAFSFRTVE AKQEKVSTTL NVAQAYYARD ENSBTAP00000014951/1-1136 KDKNELKEIC ELTGIDQSVL ERAFSFRTVE AKQEKVSTTL NVAQAYYARD ENSTTRP00000004198/1-1102 KDKNELKEIC ELTGIDQSVL ERAFSFRTVE AKQEKVSTTL NVAQAYYARD 351 400 BACU003733/1-748 ALAKNLYSRL FSWLVNRINE SIKAQTKVRK KVMGVLDIYG FEIFEDNSFE ENSP00000376132/1-1136 ALAKNLYSRL FSWLVNRINE SIKAQTKVRK KVMGVLDIYG FEIFEDNSFE bmy_21157T0/1-899 ALAKNLYSRL FSWLVNRINE SIK------- ---------- -----DNSFE ENSBTAP00000014951/1-1136 ALAKNLYSRL FSWLVNRINE SIKAQTKVRK KVMGVLDIYG FEIFEDNSFE ENSTTRP00000004198/1-1102 ALAKNLYSRL FSWLVNRINE SIKAQTKVRK KVMGVLDIYG FEIFEDNSFE 401 450 BACU003733/1-748 QFIINYCNEK LQQIFIELTL KEEQEEYIRE DIEWTHIEYF NNAIICDLIE ENSP00000376132/1-1136 QFIINYCNEK LQQIFIELTL KEEQEEYIRE DIEWTHIDYF NNAIICDLIE bmy_21157T0/1-899 QFIINYCNEK LQQIFIELTL KEEQEEYIRE DIEWTHIEYF NNAIICDLIE ENSBTAP00000014951/1-1136 QFIINYCNEK LQQIFIELTL KEEQEEYIRE DIEWTHIEYF NNAIICDLIE ENSTTRP00000004198/1-1102 QFIINYCNEK LQQIFIELTL KEEQEEYIRE DIEWTHIEYF NNAIICDLIE 451 500 BACU003733/1-748 NNTNGILAML DEECLRPGTV TDETFLEKLN QVCATHQHFE SRMSKCSRFL ENSP00000376132/1-1136 NNTNGILAML DEECLRPGTV TDETFLEKLN QVCATHQHFE SRMSKCSRFL bmy_21157T0/1-899 NNTNGILAML DEECLRPGTV TDETFLEKLN QVCATHQHFE SRMSKCSRFL ENSBTAP00000014951/1-1136 NNTNGILAML DEECLRPGTV TDETFLEKLN QVCATHQHFE SRMSKCSRFL ENSTTRP00000004198/1-1102 NNTNGILTML DEEC-RPGTV TDEV-LEKLN QVCATHQHFE SRMSKCSRFL 501 550 BACU003733/1-748 NDTSLPHSCF RIQHYAGKVL YQVEGFVDKN NDLLYRDLSQ AMWKAGHALI ENSP00000376132/1-1136 NDTSLPHSCF RIQHYAGKVL YQVEGFVDKN NDLLYRDLSQ AMWKASHALI bmy_21157T0/1-899 NDTSLPHSCF RIQHYAGKVL YQVEGFVDKN NDLLYRDLSQ AMWKAGHALI ENSBTAP00000014951/1-1136 NDTSLPHSCF RIQHYAGKVL YQVEGFVDKN NDLLYRDLSQ AMWKAGHALI ENSTTRP00000004198/1-1102 NDTSLPHSCF RIQHYAGKVL YQVEGFVDKN NDLLYRDLSQ AMWKAGHALI 551 600 BACU003733/1-748 KSLFPEGNPA KINLKRPPTA GSQFKASVAT LMKNLQTKNP NYIRCIKPND ENSP00000376132/1-1136 KSLFPEGNPA KINLKRPPTA GSQFKASVAT LMKNLQTKNP NYIRCIKPND bmy_21157T0/1-899 KSLFPEGNPA KINLKRPPTA GSQFKASVAT LMKNLQTKNP NYIRCIKPND ENSBTAP00000014951/1-1136 KSLFPEGNPA KINLKRPPTA GSQFKASVAT LMKNLQTKNP NYIRCIKPND ENSTTRP00000004198/1-1102 KSLFPEGNPA KINLKRPPTA GSQFKASVAT LMKNLQTKNP NYIRCIKPND 601 650 BACU003733/1-748 KKAAHIFNEG LVCHQVRYLG LLENVRVRRA GYAFRQAYEP CLERYKMLCK ENSP00000376132/1-1136 KKAAHIFNEA LVCHQIRYLG LLENVRVRRA GYAFRQAYEP CLERYKMLCK bmy_21157T0/1-899 KKAAHIFNEG LVCHQVRYLG LLENVRVRRA GYAFRQAYEP CLERYKMLCK ENSBTAP00000014951/1-1136 KKAAHIFNEG LVCHQVRYLG LLENVRVRRA GYAFRQAYEP CLERYKMLCK ENSTTRP00000004198/1-1102 KKAAHIFNEG LVCHQVRYLG LLENVRVRRA GYAFRQAYEP CLERYKMLCK 651 700 BACU003733/1-748 QTWPHWKGPA RAGVEVLFNE LEIPVEEYSF GRSKIFIRNP RTLFKLEDLR ENSP00000376132/1-1136 QTWPHWKGPA RSGVEVLFNE LEIPVEEYSF GRSKIFIRNP RTLFKLEDLR bmy_21157T0/1-899 QTWPHWKGPA RAGVEVLFNE LEIPVEEYSF GRSKIFIRNP RTLFKLEDLR ENSBTAP00000014951/1-1136 QTWPHWKGPA RAGVEVLFNE LEIPVEEYSF GRSKIFIRNP RTLFKLEDLR ENSTTRP00000004198/1-1102 QTWPHWKGPA RAGVEVLFNE LEIPVEEYSF GRSKIFIRNP RTLFKLEDLR 701 750 BACU003733/1-748 KQRLEDLATL IQKIYRGWKC RTHFLLXXXX X--------- ---------- ENSP00000376132/1-1136 KQRLEDLATL IQKIYRGWKC RTHFLLMKKS QIVIAAWYRR YAQQKRYQQT bmy_21157T0/1-899 KQRLEDLATL IQKIYRGWKC RTHFLLMRKS QIVIAAWYRR YAQQKRYQQI ENSBTAP00000014951/1-1136 KQRLEDLATL IQKIYRGWKC RTHFLLMRKS QIVIAAWFRR YAQQKRYQQI ENSTTRP00000004198/1-1102 KQCLEDLATL IQKIYRGWKC RTHFLLMRKS QIVIAAWYRR YAQQKRYQQI 751 800 BACU003733/1-748 ---------- ---------- ---------- ---------- ---------- ENSP00000376132/1-1136 KSSALVIQSY IRGWKARKIL RELKHQKRCK EAVTTIAAYW HGTQARRELR bmy_21157T0/1-899 KSSTLVIQSY IRGWKARKIL RELKHQKRCE EAATTIAAYW HGTQARRELS ENSBTAP00000014951/1-1136 KSSALVIQSY IRGWKARKIL RELKHQKRCE EAVTTIAAYW HGTQARRELS ENSTTRP00000004198/1-1102 KSSTLVIQSY IRGWKARKIL RELKHQKRCE EAATTIAAYW HGTQARRELS 801 850 BACU003733/1-748 ---------- -------CWL PGTG------ ---------- ---------- ENSP00000376132/1-1136 RLKEEARNKH AIAVIWAYWL GSKARRELKR LKEEARRKHA VAVIWAYWLG bmy_21157T0/1-899 RLKAEARNKH AIAVIWAYWL GSKARRELKR LKEEARRKHA VAVIWAYWLG ENSBTAP00000014951/1-1136 RLKAEARNKH AIAVIWAYWL GSKARRELKR LKEEARRKHA VAVIWAYWLG ENSTTRP00000004198/1-1102 RLKAEARNKH AIAVIWAYWL GSKARRELKR LKEEARRKHA VAVIWAYWLG 851 900 BACU003733/1-748 ---------- ---------- ---------- ---DMRNK-- ---------- ENSP00000376132/1-1136 LKVRREYRKF FRANAGKKIY EFTLQRIVQK YFLEMKNKMP SLSPIDKNWP bmy_21157T0/1-899 LKVRREYRKF FRANAGKKIY EFTLQRIVQK YFLEMKNKVP SLSPIDKNWP ENSBTAP00000014951/1-1136 LKVRREYRKF FRANAGKKIY EFTLQRIVQK YFLEMKNKVP SLSPIDKNWP ENSTTRP00000004198/1-1102 LKVRREYRKF FRANAGKKIY EFTLQRIVQK YFLEMKNKVP SLSPIDKNWP 901 950 BACU003733/1-748 ---------- ---------- ---------- ---------- ---------- ENSP00000376132/1-1136 SRPYLFLDST HKELKRIFHL WRCKKYRDQF TDQQKLIYEE KLEASELFKD bmy_21157T0/1-899 SRPYLFLDST HKELKRIFHL WRCKKYRDQF TDQQKLIYEE KLEASELFKD ENSBTAP00000014951/1-1136 SRPYLFLDST HKELKRIFHL WRCKKYRDQF TDQQKLIYEE KLEASELFKD ENSTTRP00000004198/1-1102 SRPYLFLDST HKELKRIFHL WRCKKYRDQF TDQQKLIYEE KLEASELFKD 951 1000 BACU003733/1-748 ---------- ---------- ---------- ---------- ---RGINR-- ENSP00000376132/1-1136 KKALYPSSVG QPFQGAYLEI NKNPKYKKLK DAIEEKIIIA EVVNKINRAN bmy_21157T0/1-899 KKALYPSSVG QPFQGPYLEI NKNPKYKKLK DAIEEKIIIA EVVNKINRAN ENSBTAP00000014951/1-1136 KKALYPSSVG QPFQGPYLEI NKNPKYKKLK DAIEEKIIIA EVVNKINRAN ENSTTRP00000004198/1-1102 KKALYPSSVG QPFQGPYLEI NKNPKYKKLK DAIEEKIIIA EVVNKINRAN 1001 1050 BACU003733/1-748 ---------- ---------- ---------- ---------- ---------- ENSP00000376132/1-1136 GKSTSRIFLL TNNNLLLADQ KSGQIKSEVP LVDVTKVSMS SQNDGFFAVH bmy_21157T0/1-899 GKSTSRIFLL TNNNLLLADQ KSGQIKSEVP LVDVTKVSMS SQNDGFFAVH ENSBTAP00000014951/1-1136 GKSTSRIFLL TNNNLLLADQ KSGQIKSEVP LVDVTKVSMS SQNDGFFAIH ENSTTRP00000004198/1-1102 GKSTSRIFLL TNNNLLLADQ KSGQIKSEVP LVDVTKVSMS SQNDGFFAVH 1051 1100 BACU003733/1-748 ---------- ---------- ---------- ---------- ---------- ENSP00000376132/1-1136 LKEGSEAASK GDFLFSSDHL IEMATKLYRT TLSQTKQKLN IEISDEFLVQ bmy_21157T0/1-899 LKEGSEAASK GDFLFSSDHL IEMATKLYRT TLSQTRQKLN IEISDEFLVQ ENSBTAP00000014951/1-1136 LKEGCEAASK GDFLFSSDHL IEMATKLYRT TLSQTKQKLN IEISDEFLVQ ENSTTRP00000004198/1-1102 LKEGSEAASK GDFLFSSDHL IEMATKLYRT TLSQTKQKLN IEISDEFLVQ 1101 1150 BACU003733/1-748 ---------- ---------- ---------- ------ ENSP00000376132/1-1136 FRQDKVCVKF IQGNQKNGSV PTCKRKNNRL LEVAVP bmy_21157T0/1-899 FRQDKVCVKF IQGNQKNGSV PTCKRKNNRL LEVAVP ENSBTAP00000014951/1-1136 FRQDKVCVKF IQGNQKNGSV PTCKRKNNRL LEVAVP ENSTTRP00000004198/1-1102 FRQDKVCVKF IQGNQKNGSV PTCKRKNNRL LEVAVP