KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:12 2014 Check: 00 .. Name: ENSP00000371152/1-411 Len: 450 Check: 8246 Weight: 1.00 Name: ENSBTAP00000014960/1-395 Len: 450 Check: 138 Weight: 1.00 Name: bmy_00279T0/1-429 Len: 450 Check: 1669 Weight: 1.00 Name: BACU005178/1-303 Len: 450 Check: 8295 Weight: 1.00 Name: ENSTTRP00000003216/1-403 Len: 450 Check: 7261 Weight: 1.00 // 1 50 ENSP00000371152/1-411 -----MNCCI GLGEKARGSH RASYPSLSAL FTEASILGFG SFAVKAQWTE ENSBTAP00000014960/1-395 MLGWSRLTFI LLSGIVTCLV AQQVPP---- ---------- -------WTE bmy_00279T0/1-429 MLGWSRLTFV LLSVTVTCSV AQHVPPVVDR RLQKINLSSL -------WTN BACU005178/1-303 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003216/1-403 ---------- PISRKVRGST WTFHLCLSAR TEAILCLVSS AAKV---WTE 51 100 ENSP00000371152/1-411 DCR------- ---KSTYPP- ---------- ---------- ---SGPTYRG ENSBTAP00000014960/1-395 DCR------- ---KSTYPP- ---------- ---------- ---SGPTYRG bmy_00279T0/1-429 VSKHQMIKTH SDLRGDFSPC DDLIIIMTVN KNLSHVFYPE TNYSSLSYRG BACU005178/1-303 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003216/1-403 DCR------- ---KSTYPP- ---------- ---------- ---SGPTXXX 101 150 ENSP00000371152/1-411 AVPWYTINLD LPPYKRWHEL MLDKAPVLKV IVNSLKNMIN TFVPSGKIMQ ENSBTAP00000014960/1-395 PVPWYTINLD LPPYKRWHEL MVVKAPALKV IVNSMKNIVN AFVPSGKIIH bmy_00279T0/1-429 PVPWYTINLD LPPYKRWHEL MVDKAPALKV IVNSLKNMIN AFEPSGKIVQ BACU005178/1-303 ---------- ---------- ---------- ------MTVN VFVFQ----- ENSTTRP00000003216/1-403 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 151 200 ENSP00000371152/1-411 VVDEKLPGLL GNFPGPFEEE MKGIAAVTDI PLGEIISFNI FYELFTICTS ENSBTAP00000014960/1-395 LVDQKLPGLL GNFPGPFEEE MKGIAAVTEI PLGEIILFNI FYEFFTICTS bmy_00279T0/1-429 LVDQKLRVQA SETPPP-NQP FRLTQTVCG- HLREIISFNI FYEFFTICTS BACU005178/1-303 ------PGLL GSFPGPFEEE MKGIAAVTEI PLGEIILFNI FYEFFTICTS ENSTTRP00000003216/1-403 XXXXXXPGLL GNFPGPFEEE MKGIAAVTEI PLGEIISFNI FYEFFTICTS 201 250 ENSP00000371152/1-411 IVAEDKKGHL IHGRNMDFGV FLGWNINNDT WVITEQLKPL TVNLDFQRNN ENSBTAP00000014960/1-395 IITEDKEGHL LHGRNLDFGV FLGWNINNDT WVITEELKPL TVNLDFQRNN bmy_00279T0/1-429 IITEDKEGHL LHARNMDFGV FLGWNVNNNT WVVTEELKPL TVNLDFQRNN BACU005178/1-303 IITEDKEGHL LHARNMDFGV FLGWNVNNNT WVVTEELKPL TVNLDFQRNS ENSTTRP00000003216/1-403 IITEDKEGHL LHARNMDFGV FLGWNVNNNT WVVTEELKPL TVNLDFQRNN 251 300 ENSP00000371152/1-411 KTVFKASSFA GYVGMLTGFK PGLFSLTLNE RFSINGGYLG ILEWILGKKD ENSBTAP00000014960/1-395 KTLFKATTFA GYVGMLTGFK PGLFSVTLNE RFSIDGGFMG VMEWILGKKD bmy_00279T0/1-429 KTVFKAAGFA GYVGMLTGFK PGLFSLTLNE RFSTNGGFMG VIEWILGKKD BACU005178/1-303 KTVFKAAGFA GYVGMLTGFK PGLFSLTLNE RFSTNGGFMG VIEWILGKKD ENSTTRP00000003216/1-403 KTVFKAAGFA GYVGMLTGFK PGLLSLTLNE RFSTNGGFMG VIEWILGKKD 301 350 ENSP00000371152/1-411 VMWIGFLTRT VLENSTSYEE AKNLLTKTKI LAPAYFILGG NQSGEGCVIT ENSBTAP00000014960/1-395 AQWVGFIIRS VLENSTSYEE TKNILTKTKI LAPAYFILGG NQSGEGCVIT bmy_00279T0/1-429 AKWIG----- -------YEE AKXILTKTKI LAPAYFILGG NKSGEGCVIT BACU005178/1-303 AKWIGFIIRS VLENSTSYEE AKTILTKSKI LAPAYFILGG SKSGEGCVIT ENSTTRP00000003216/1-403 AKWIGFIIRS VLENSTSYEE AKTILTKTKV LAPAYFILGG NKSGEGCVIT 351 400 ENSP00000371152/1-411 RDRKESLDVY ELDAKQGRWY VVQTNYDRWK HPFFLDDRRT PAKMCLNRTS ENSBTAP00000014960/1-395 RDRKQSLDIY ELDPKHGRWY VVQTNYDRWK NPFFLDDRRT PAKMCLNQTT bmy_00279T0/1-429 RDRVQSLDIY ELDPKQGIWY VVQTNYDRWK NPFFLDDRRT PAKMCLNRTT BACU005178/1-303 RDRVQSLDIY ELDPKQGIWY VVQTNYDRWK NPFFLDNRRT PAKMCLNRTT ENSTTRP00000003216/1-403 RDREQSLDIY ELDPKQGIWY VVQTNYDRWK NPFFLDNRRT PAKMCLNQTT 401 450 ENSP00000371152/1-411 QENISFETMY DVLSTKPVLN KLTVYTTLID VTKGQFETYL RDCPDPCIGW ENSBTAP00000014960/1-395 QENISFATIY DVLSTKPILN KLTVYTVLID VTKGQFETYL RDCPDPCIGW bmy_00279T0/1-429 QENISFATMY DVLSTKPVLN KLTVYTALID VTKGQFETYL RDCPDPCIGW BACU005178/1-303 QENISFATMY DVLSTKPVLN KLTVYTALID VTKGQFETYL RDCPDPCIGW ENSTTRP00000003216/1-403 QENISFATMY DVLSTKPVLN KLTVYTALID VTKGQFETYL RDCPDPCIGW