KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:13 2014 Check: 00 .. Name: ENSP00000338157/1-673 Len: 693 Check: 8661 Weight: 1.00 Name: ENSBTAP00000014968/1-673 Len: 693 Check: 7533 Weight: 1.00 Name: bmy_19844T0/1-656 Len: 693 Check: 9401 Weight: 1.00 Name: BACU004002/1-423 Len: 693 Check: 8315 Weight: 1.00 Name: ENSTTRP00000001426/1-673 Len: 693 Check: 7407 Weight: 1.00 // 1 50 ENSP00000338157/1-673 MDLTKMGMIQ LQNPSHPTGL LCKANQMRLA GTLCDVVIMV DSQEFHAHRT ENSBTAP00000014968/1-673 MDLTKMGMIQ LQNPSHPTGL LCKANQMRLA GTLCDVVIMV DSQEFHAHRT bmy_19844T0/1-656 ---------- ---------- ------MRLA GTLCDVVIMV DSQEFHAHRT BACU004002/1-423 MDLTKMGMIQ LQNPSHPTGL LCKANQMRLA GTLCDVVIMV DSQEFHAHRT ENSTTRP00000001426/1-673 MDLTKMGMIQ LQNPSHPTGL LCKANQMRLA GTLCDVVIMV DSQEFHAHRT 51 100 ENSP00000338157/1-673 VLACTSKMFE ILFHRNSQHY TLDFLSPKTF QQILEYAYTA TLQAKAEDLD ENSBTAP00000014968/1-673 VLACTSKMFE ILFHRNSQHY TLDFLSPKTF QQILEYAYTA TLQAKAEDLD bmy_19844T0/1-656 VLACTSKMFE ILFHRNSQHY TLDFLSPKTF QQILEYAYTA TLQAKAEDLD BACU004002/1-423 VLACTSKMFE ILFHRNSQHY TLDFLSPKTF QQILEYAYTA TLQAKAEDLD ENSTTRP00000001426/1-673 VLACTSKMFE ILFHRNSQHY TLDFLSPKTF QQILEYAYTA TLQAKAEDLD 101 150 ENSP00000338157/1-673 DLLYAAEILE IEYLEEQCLK MLETIQASDD NDTEATMADG GAEEEEDRKA ENSBTAP00000014968/1-673 DLLYAAEILE IEYLEEQCLK ILETIQASDD NDTEATMAEG GAEEEEDRKA bmy_19844T0/1-656 DLLYAAEILE IEYLEEQCLK ILETIQASDD NDTEATMADG GAEEEEDRKA BACU004002/1-423 DLLYAAEILE IEYLEEQCLK ILETIQASDD NDTEATMADG GAEEEEDRKA ENSTTRP00000001426/1-673 DLLYAAEILE IEYLEEQCLK ILETIQASDD NDTEATMADG GAEEEEDRKA 151 200 ENSP00000338157/1-673 RYLKNIFISK HSSEESGYAS VAGQSLPGPM VDQSPSVSTS FGLSAMSPTK ENSBTAP00000014968/1-673 RYLKNIFISK HSSEESGYAS VAAQSLPGPM VDQSPSVSTS FGLSAMSPTK bmy_19844T0/1-656 RYLKNIFISK HSSEESGYAR VAAQSLPGPM VDQSPSVSTS FGLSAMSPTK BACU004002/1-423 RYLKNIFISK HSSEESGYAR VAAQSLPGPM VDQSPSVSTS FGLSAMSPTK ENSTTRP00000001426/1-673 RYLKNIFISK HSSEERGYAS VAAQSLPGPM VDQSPSVSTS FGLSAMSPTK 201 250 ENSP00000338157/1-673 AAVDSLMTIG QSLLQGTLQP PAGPEEPTLA GGGRHPGVAE VKTEMMQVDE ENSBTAP00000014968/1-673 AAVDSLMTIG QSLLQGALQP PAGPEEPTLA GGGRHPAVAE VKPEMMQVDE bmy_19844T0/1-656 AAVDSLMTIG QSLLQGALQL PAGPEEPTLA GVGRHPAVAE VKPEMMQVDE BACU004002/1-423 AAVDSLMTIG QSLLQGALQL PAGPEEPTLA GVGRHPAVAE VKPEMMQVDE ENSTTRP00000001426/1-673 AAVDSLMTIG QSLLQGALQL PARPEEPTLA GVGRHPAVAE VKPEMMQVDE 251 300 ENSP00000338157/1-673 VPSQDSPGAA ESSISGGMGD KVEERGKEGP GTPTRSSVIT SARELHYGRE ENSBTAP00000014968/1-673 VPGQESPGTV ESSISAGMGD KVEERGKEGP GTPTRSSVIT SARELHYGRE bmy_19844T0/1-656 VPGQDSPGAA ESSVPAGMGD KVEERGKEGP GTPTRGSVIT SARELHYGRE BACU004002/1-423 VPGQDSPGAA ESSVSAGMGD KVEERGKEGP GTPTRSSVIT SARELHYGRE ENSTTRP00000001426/1-673 VPGQDSPGAA ESSISAGMGD KVEERGKEGP GTPTRSSVIT SARELHYGRE 301 350 ENSP00000338157/1-673 ESAEQVPPPA EAGQAPTGRP EHPAPPPEKH LGIYSVLPNH KADAVLSMPS ENSBTAP00000014968/1-673 ESTEQLPPPV EAGQGPPGRL EPPAHPAEKH LGLYSVLPNH KADAVLSMPS bmy_19844T0/1-656 ESAEQLPPLT EVGQGPPGRP EPLAPPAEKH LGIYSVLPNH KADAVLSMPS BACU004002/1-423 ESAEQLPPLT EVGQGPPGRP EPPAPPAEKH LGIYSVLPNH KADAVLSMPS ENSTTRP00000001426/1-673 ESAEQLPPLT EVGQGPPGRP EPPAPPAEKH LGIYSVLPNH KADAVLSVPS 351 400 ENSP00000338157/1-673 SVTSGLHVQP ALAVSMDFST YGGLLPQGFI QRELFSKLGE LAVGMKSESR ENSBTAP00000014968/1-673 SVTSGLHVQP ALAVSMDFST YGGLLPQGFI QRELFSKLGE LAVGMKAESR bmy_19844T0/1-656 SVTSGLHVQP TLAVSMDFST YGGLLPQGFI QRELFSKLGE LAVGMKAESR BACU004002/1-423 SVTSGLHVQP TLAVSMDFST YGGLLPQGFI QRELFSKLGE LAVGMKAESR ENSTTRP00000001426/1-673 SVTSGLHVQP TLAVSMDFST YGGLLPQGFI QRELFSKLGE LAVGMKAESR 401 450 ENSP00000338157/1-673 TIGEQCSVCG VELPDNEAVE QH--RKLHSG MKTYGCELCG KRFLDSLRLR ENSBTAP00000014968/1-673 SVGEQCSVCG VELPDNEAVE QH--RKLHSG MKTYGCELCG KRFLDSLRLR bmy_19844T0/1-656 TVGEQCSVCG VELPDNEAVE QHSYSQVLGP GSSVLFAICE KPPVEG---- BACU004002/1-423 TVGEQCSVCG VELPDNEAVE QH--R----- ---------- ---------- ENSTTRP00000001426/1-673 TVGEQCSVCG VELPDNEAVE QH--RKLHSG MKTYGCELCG KRFLDSLRLR 451 500 ENSP00000338157/1-673 MHLLAHSAGA KAFVCDQCGA QFSKEDALET HRQTHTGTDM AVFCLLCGKR ENSBTAP00000014968/1-673 MHLLAHSAGA KAFVCDQCGA QFSKEEALET HRQTHTGTDM AVFCLLCGKR bmy_19844T0/1-656 -HFSGVAPGD KRVNYTECRQ ERVGLCGEGL DRTPPSGTSK QSCPSVSGIY BACU004002/1-423 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001426/1-673 MHLLAHSAGA KAFVCDQCGA QFSKEDALET HRQTHTGTDM AVFCLLCGKR 501 550 ENSP00000338157/1-673 FQAQSALQQH ------MEVH AGVRSYICSE CNRTFPSHTA LKR-HLRSHT ENSBTAP00000014968/1-673 FQAQSALQQH ------MEVH AGVRSYICSE CNRTFPSHTA LKR-HLRSHT bmy_19844T0/1-656 GIVDSSSRRN KRFVDVAQPA AELMVLRAVS CQLKLTTSFS LGRENEDEFH BACU004002/1-423 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001426/1-673 FQAQSALQQH ------MEVH AGVRSYICSE CNRTFPSHTA LKR-HLRSHT 551 600 ENSP00000338157/1-673 GDHPYECEFC GSCFRDESTL KSHKRIH-TG EKPYECNGCG KKFSLK---- ENSBTAP00000014968/1-673 GDHPYECEFC GSCFRDESTL KSHKRIH-TG EKPYECNGCG KKFSLK---- bmy_19844T0/1-656 GEDNEAMAME NDSIDGKWTL KVHCELNGLG KKSEPIAEVH KLFPLSVPFR BACU004002/1-423 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001426/1-673 GDHPYECEFC GSCFRDESTL KSHKRIH-TG EKPYECNGCG KKFSLK---- 601 650 ENSP00000338157/1-673 -HQLETHYRV HTGEKPFECK LCHQRSRDYS AMIKHLRTHN GA-----SPY ENSBTAP00000014968/1-673 -HQLETHYRV HTGEKPFECK LCHQRSRDYS AMIKHLRTHN GA-----SPY bmy_19844T0/1-656 LGEVSEARKL HSGMKTYGCE LCGKRFLDSL RLRMHLLAHS ENILALDVHA BACU004002/1-423 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001426/1-673 -HQLETHYRV HTGEKPFECK LCHQRSRDYS AMIKHLRTHN GA-----SPY 651 700 ENSP00000338157/1-673 QCTICTEYCP SLSSMQKHMK GHKPEEIPPD WRIEKTYLYL CYV ENSBTAP00000014968/1-673 QCTICSEYCP SLSSMQKHMK GHKPEEIPPD WRIEKTYLYL CYV bmy_19844T0/1-656 ETTDSGDDSS WSCDLLGLCL GPSVQGCARE TSCLQTT--- --- BACU004002/1-423 ---------- ---------- ---------- ---------- --- ENSTTRP00000001426/1-673 QCTICTEYCP SLSSMQKHMK GHKPEEIPPD WRIEKTYLYL CYV