KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:13 2014 Check: 00 .. Name: bmy_19126T0/1-395 Len: 444 Check: 7639 Weight: 1.00 Name: ENSP00000312368/1-440 Len: 444 Check: 9866 Weight: 1.00 Name: ENSBTAP00000014975/1-439 Len: 444 Check: 4765 Weight: 1.00 Name: BACU004826/1-326 Len: 444 Check: 1003 Weight: 1.00 Name: ENSTTRP00000004391/1-440 Len: 444 Check: 4038 Weight: 1.00 // 1 50 bmy_19126T0/1-395 MTIVGPYFCS WDFQVCHSED LRTAVVFEVL LVVTF----- ---------Q ENSP00000312368/1-440 MKM---HFC- IPVSQQRSDA LGGRYVLYSV HLDGFLFCRV RYSQLHGWNE ENSBTAP00000014975/1-439 MKM---HFC- IPVSQQRPDA LGGRYVLYSV YLDGFLFCKV RYSQLHRWNE BACU004826/1-326 MKM---HFC- IPVSQQRPDA LGGRYVLYSV YLDGFLFCKV RYSQLHRWNE ENSTTRP00000004391/1-440 MKM---HFC- IPVSQQRPDA LGGRYVLYSV YLDGFLFCKV RYSQLHRWNE 51 100 bmy_19126T0/1-395 QHKRVYDES- -------NLA PTADLQRPRS ETTVVY---- ----SLIVNN ENSP00000312368/1-440 QLRRVFGNCL PPFPPKYYLA MTTAMADERR DQLEQYLQNV TMDPNVLRSD ENSBTAP00000014975/1-439 QLKRVFGNCL PPFPPKYYLA MTTSMADERR DQLEQYLQNV TMDPNMLRSD BACU004826/1-326 QLRRVFGNCL PPFPPKYYLA MTASMADERR DQLEQYLQNV TMDPNMLRSD ENSTTRP00000004391/1-440 QLRRVFGNCL PPFPPKYYLA MTTSMADERR DQLEQYLQNV TMDPNMLRSD 101 150 bmy_19126T0/1-395 MFEK--KETK KDTFSITTKK ASLDIFLPDG RSIKVEILTS DTAERVLEVV ENSP00000312368/1-440 VFVEFLKLAQ LNTFDIATKK AYLDIFLPNE QSIRIEIITS DTAERVLEVV ENSBTAP00000014975/1-439 VFIDFLKLVQ LDTFSMATKK ASLDILLPDG RSIKIEILTS DTAERVLEVV BACU004826/1-326 VFVDFLKLVQ LDTFSITTKK ASLDIFLPDG RSIKVEILTS DTAERVLEVV ENSTTRP00000004391/1-440 VFVDFLKLVQ LDTFSITTEK ASLDIFLPDG RSIKVEILTS DTAERVLEVV 151 200 bmy_19126T0/1-395 SRKIGLCQEL LGYFGLFLIR SYKEGKLSVI KKLVDFELPY VSLCSSEVEN ENSP00000312368/1-440 SHKIGLCREL LGYFGLFLIR FGKEGKLSVV KKLADFELPY VSLGSSEVEN ENSBTAP00000014975/1-439 SHNIGLCQEL LEYFSLFLIQ FCKEGRLSVV KKLADFELPC VSLRSSEVEN BACU004826/1-326 SRKIGLCQEL LGYFGLFLIR SYKEDKLSVI KKLVDFELPY VSLRSSEVEN ENSTTRP00000004391/1-440 SHKIGLCQEL LGYFGLFLIR SYKEGKLSVI KKLVDFELPY VSLRSSEVEN 201 250 bmy_19126T0/1-395 FQVGLRKWYL DPSLDSRLMD CRAAVDLIYM QAIQBIEKEW AKPTEVQRQK ENSP00000312368/1-440 CKVGLRKWYM APSLDSVLMD CRVAVDLLYM QAIQDIEKGW AKPTQAQRQK ENSBTAP00000014975/1-439 CKVGLRKWYL DPSLDARLMD CRTAVDLIYM QAIQDIEKEW AKPTEVQRQK BACU004826/1-326 FQVGLRKWYL DPSLDSRLMD CRAAVDLIYM QAIQDIEKEW AKPTEVQRQK ENSTTRP00000004391/1-440 FKVGLRKWYL DPSLDSRLMD CRAAVDLIYM QAIQDIEKEW AKPTEVQRQK 251 300 bmy_19126T0/1-395 LEALQKEDNQ TKFLELSQEV WHYGYVQLDP CTCDYPEPGC GTVLSVGNNE ENSP00000312368/1-440 LEAFQKEDSQ TKFLELAREV RHYGYLQLDP CTCDYPESGS GAVLSVGNNE ENSBTAP00000014975/1-439 LEDLQKEDNQ TKFLELAREV QHYGYMRLEP CTCDHPEPGC QALLSVGNNE BACU004826/1-326 LEALQKEDNQ TK-------- ---------- ---------- ---------- ENSTTRP00000004391/1-440 LEALQKEDNQ AKFLELSQEV WHYGYVQLDP CTCDYPEPGC GTVLSVGNNE 301 350 bmy_19126T0/1-395 ISCCITLPDN QTQDVIFQMN RVKCWQVTFL ---------- -----NLELR ENSP00000312368/1-440 ISCCITLPDS QTQDIVFQMS RVKCWQVTFL GTLLDTDGPQ RTLNQNLELR ENSBTAP00000014975/1-439 ISCCITLPDN QTQDVIFQMD RVKCWQVTFL GTLLDTDGPQ QTLNQNLELR BACU004826/1-326 ---------- ---------- ---------- GTLLDTDGPQ QTLNQNLELR ENSTTRP00000004391/1-440 ISCCITLPDN QTQDVIFQMN RVKCWQVTFL GTLLDTDGPQ QTLNQNLELR 351 400 bmy_19126T0/1-395 FQYSEDSHWQ WFVIYTKQAF LLSSCLKKMI SEKMVKQAAE NPEM-IEVPE ENSP00000312368/1-440 FQYSEDSCWQ WFVIYTKQAF LLSSCLKKMI SEKMVKLAAE NTEMQIEVPE ENSBTAP00000014975/1-439 FQYFEDSHWR WFVIYTKQAF LLSSCLKKMI SEKMVKQAAE NPEMQIEVPE BACU004826/1-326 FQYSEDSHWQ WFVIYTK--- ---------- ---------- ---------- ENSTTRP00000004391/1-440 FQYSEESHWQ WFVLYTKQAF LLSSCLKKMI SEKMVKQAAE NPEMQIEVPE 401 450 bmy_19126T0/1-395 QGKSKKHHSQ QS-QKDYSSF LPRKSKIKTA EVDCGLGTIK EEGL ENSP00000312368/1-440 QSKSKKYHIQ QSQQKDYSSF LSRKSKIKIA KDDCVFGNIK EEDL ENSBTAP00000014975/1-439 QGKSKKYHIQ QNQQKDHSSF LPRKSKIKIA EVDCGFGTIK ED-L BACU004826/1-326 ---------- ---QKDYSSF LPRKSKIKTA EVDCGLGTIK EEGL ENSTTRP00000004391/1-440 QGKSKKHHSQ QSQQKDYSSF LPRKSKIKTA EVDCGLGTIK EEGL