KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:13 2014 Check: 00 .. Name: ENSP00000007969/1-343 Len: 344 Check: 4049 Weight: 1.00 Name: ENSTTRP00000004484/1-294 Len: 344 Check: 6675 Weight: 1.00 Name: ENSBTAP00000014977/1-342 Len: 344 Check: 2073 Weight: 1.00 Name: bmy_11480T0/1-303 Len: 344 Check: 9274 Weight: 1.00 Name: BACU003070/1-341 Len: 344 Check: 8058 Weight: 1.00 // 1 50 ENSP00000007969/1-343 MSDEDDLEDS EPDQDDSEKE -EDEKETEEG EDYRKEGEEF PEEWLPTPLT ENSTTRP00000004484/1-294 MSDEDDLEDF ESNLDGLERE -DDEKETEEW EDHRKEGED- SEEWMSTPLT ENSBTAP00000014977/1-342 MSDEDDLEDF ETDQDDLERE -DDEKETEEW EDYRKEGEE- SEDWISTPLT bmy_11480T0/1-303 MSDEDDLEDF EPDLDGLERE DDDEKETEEW EDYRKEGED- SEEWMSTPLT BACU003070/1-341 MSDEDDLEDF EPDLDGLERE DDDEKETEEW EDYRKEGED- SEGWMSTPLT 51 100 ENSP00000007969/1-343 EDMMKEGLSL LCKTGNGLAH AYVKLEVKER DLTDIYLLRS YIHLRYVDIS ENSTTRP00000004484/1-294 EDMVKEGLSA LCKTGNGLAH AYVKLVVKDR DLTDIHLLRS YIHLRFVDVS ENSBTAP00000014977/1-342 EDMMKEGLSL LCKTGNGLAH AYVKLEIKDR DLTDIHLLRS YIHLRYVDVS bmy_11480T0/1-303 EDMMKEGLSA LCKTGNGLAH AYVKLEVKDR DLTDIYLLRS YIHLRYVDVS BACU003070/1-341 EDMMKEGLSA LCKTGNGLAH AYVKLEVKDR DLTDIYLLRS YIHLRYVDVS 101 150 ENSP00000007969/1-343 ENHLTDLSPL NYLTHLLWLK ADGNRLRSAQ MNELPYLQIA SFAYNQITDT ENSTTRP00000004484/1-294 RNHLTDLSPL NCLTHLLWLK ADGNRLRSAR LSELPYLQIA SFAYNQITDT ENSBTAP00000014977/1-342 ENHLTDLSPL NHLTHLLWLK ADGNQLRSAR LNELPYLQIA SFAYNQITDT bmy_11480T0/1-303 ENHLTDLSPL NYLTHLLWLK ADGNRLQSAR LNELPYLQIA SFAYNQITDT BACU003070/1-341 ENHLTDLSPL NYLTHLLWLK ADGNRLRSAQ LNELPYLQIA SFAYNQITDT 151 200 ENSP00000007969/1-343 EGISHPRLET LNLKGNSIHM VTGLDPEKLI SLHTVELRGN QLESTLGINL ENSTTRP00000004484/1-294 EGISHPRLAS LDLKGNHIHM VTGLDPQKLM SLHTLELRGN QLNSTVGINL ENSBTAP00000014977/1-342 EGISHPRLAS LDLKGNRIHM VTGLDPQKLI SLHTLELRGN QLNSTLGINL bmy_11480T0/1-303 EGISHPRLAS LDLKGNHIHM ---------- ---------- ---------- BACU003070/1-341 EGISHPRLAS LDLKGNHIHM VTGLDPQTLI SLHTLELRGN QLNSTLGINL 201 250 ENSP00000007969/1-343 PKLKNLYLAQ NMLKKVEGLE DLSNLTTLHL RDNQIDTLSG FSREMKSLQY ENSTTRP00000004484/1-294 PKLKNLFLXX XXXXXXXGLE SLSNLTTLH- RDNQIETLSG FSKEMESLQY ENSBTAP00000014977/1-342 PKLKNLFLAQ NMLKKVEGLE NLSNLTTLHL RDNQIETLSG FSKEMKSLQY bmy_11480T0/1-303 --------AQ NLLKKVEGLE NLSNLTTLHL RDNQIETLSG FSKEMKSLQY BACU003070/1-341 PKLKNLFLAQ NLLKKVEGLE NLSNLTTLHL RDNQIETLSG FSKEMKSLQY 251 300 ENSP00000007969/1-343 LNLRGNMVAN LGELAKLRDL PKLRALVLLD NPCTDETSYR QEALVQMPYL ENSTTRP00000004484/1-294 LNLRGNMVAD LGELAKLRNL PKLRALVLLD NPCTDENDYR REALVQV--- ENSBTAP00000014977/1-342 LNLRGNMVAD LGELAKLRDL PRLRALVLLD NPCTDENDYR QEALVQIAHL bmy_11480T0/1-303 LNLRGNMVAD LGELAKLRDL PKLRALVLLD NPCTDENDYR QEALVQMAYL BACU003070/1-341 LNLRGNMVAD LGELAKLRDL PKLRALVLLD NPCTDENDYR QEALAQMPHL 301 350 ENSP00000007969/1-343 ERLDKEFYEE EERAEADVIR QRLKEEKEQE PEPQRDLEPE QSLI ENSTTRP00000004484/1-294 ---------- ---------- ---------- ---------- ---- ENSBTAP00000014977/1-342 ERLDKEFYEE EERAEADEIR QRMKEEQEQE AEVEPESELD QSST bmy_11480T0/1-303 ERLDKGLYEE EERAEADATR QRVKEEQEAE PEP--ELEPD PSSI BACU003070/1-341 GRLDKDLYEE EERAEAGATR QRVKEAQEAE PEP--ELGPD PSSI