KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:54:14 2014 Check: 00 ..
Name: ENSP00000441389/1-248 Len: 249 Check: 5297 Weight: 1.00
Name: ENSBTAP00000014983/1-163 Len: 249 Check: 9306 Weight: 1.00
Name: ENSTTRP00000003359/1-249 Len: 249 Check: 3027 Weight: 1.00
Name: bmy_18164T0/1-249 Len: 249 Check: 4145 Weight: 1.00
Name: BACU010866/1-249 Len: 249 Check: 4266 Weight: 1.00
//
1 50
ENSP00000441389/1-248 MGKRDNRVAY MNPIAMARWR GPTQSVGPTI QDYLNRPRPT WEEVKKQLEN
ENSBTAP00000014983/1-163 MGKWDNRVAY MNPIAMARWR GLSQSAGPTI QDYLNRPRPT WEEVKKQLEN
ENSTTRP00000003359/1-249 MGKRDNRVAY MNPIAMARWR GPSQSAGPTI QDYLNRPRPT WEEVKKQLEN
bmy_18164T0/1-249 MGKRDNRVAY MNPIAMARWR GPSQSAGPTI QDYLNRPRPT WEEVKKQLEN
BACU010866/1-249 MGKRDNRVAY MNPIAMARWR GPSQSAGPTI QDYLNRPRPT WEEVKKQLEN
51 100
ENSP00000441389/1-248 KKTGSKALAE FEEKMNENWK KELEKSREKL LSGNESSSKK RERKKKRKKK
ENSBTAP00000014983/1-163 KKKGSKALAE FEEKMNENWK KELEKSREKL LSGNESLSKK RDRKKKKKKK
ENSTTRP00000003359/1-249 KKKGSKALAE FEEKMNENWK KELEKSREKL LSGNESSSKK RERKKKKKKK
bmy_18164T0/1-249 KKKGSKALAE FEEKMNENWK KELEKSREKL LSGNESSSKK RERKKKKKKK
BACU010866/1-249 KKKGSKALAE FEEKMNENWK KELEKSREKL LSGNESSSKK RERKKKKKKK
101 150
ENSP00000441389/1-248 SCRSSSSSS- SSDSSSSSSD SEDEEKKQGK RRKKKKNRSY KSSQSSTHES
ENSBTAP00000014983/1-163 SCRSSSSSSL SSDSSSSSPD SEDEEKKEGK KRKKKKNHSY KSSESSPCDS
ENSTTRP00000003359/1-249 SCQSSSSSTS SSDSSSSSSD SEDEEKKQGK KRKKKKNRSY KSSESCTCES
bmy_18164T0/1-249 SCQSSSSSTS SSDSSSSSSD SEDEEKKQGK KRKKKKNRSY KSSESSTCES
BACU010866/1-249 SCQSSSSSTS SSDSSSSSSD SEDEEKKQGK KRKKKKNRSY KSSESSTCES
151 200
ENSP00000441389/1-248 ESESKESVKK KKKSKDETEK EKDVRSLSKK RKKSYPDDKP LSSESSSESD
ENSBTAP00000014983/1-163 ESESKESVKK KKK------- ---------- ---------- ----------
ENSTTRP00000003359/1-249 ESESKESVKK KKKSKDETGK EKYIRSLSKK RKKTCPEGKP LSSESSSESD
bmy_18164T0/1-249 ESESKESVKK KKKSKDETEK EKYIRSLSKK RKKTCPEDKP LLSESSTESD
BACU010866/1-249 ESESKESVKK KKKSKDETEK EKYIRSLSKK RKKTCPEDKP LSSESSSESD
201 250
ENSP00000441389/1-248 YEEDVQAKKK RRCEEREQAK EKVKKKKKKQ HKKHSKKKKK KSGSSHKSR
ENSBTAP00000014983/1-163 ---------- ---------- ---------- ---------- ---------
ENSTTRP00000003359/1-249 YEEEVQAKKK RRCEEREKAM EKAKKKKKKQ HKKHSKKKKK KSGSSHKSG
bmy_18164T0/1-249 YEEEVQAKKK RRREEREKAT EKAKKKKKKQ HKKHSKKKKK KSGSNHKSG
BACU010866/1-249 YEEEVQAKKK RRREEREKAT EKAKKKKKKQ HKKHSKKKKK KSGSNHKSG