KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:14 2014 Check: 00 .. Name: ENSP00000441389/1-248 Len: 249 Check: 5297 Weight: 1.00 Name: ENSBTAP00000014983/1-163 Len: 249 Check: 9306 Weight: 1.00 Name: ENSTTRP00000003359/1-249 Len: 249 Check: 3027 Weight: 1.00 Name: bmy_18164T0/1-249 Len: 249 Check: 4145 Weight: 1.00 Name: BACU010866/1-249 Len: 249 Check: 4266 Weight: 1.00 // 1 50 ENSP00000441389/1-248 MGKRDNRVAY MNPIAMARWR GPTQSVGPTI QDYLNRPRPT WEEVKKQLEN ENSBTAP00000014983/1-163 MGKWDNRVAY MNPIAMARWR GLSQSAGPTI QDYLNRPRPT WEEVKKQLEN ENSTTRP00000003359/1-249 MGKRDNRVAY MNPIAMARWR GPSQSAGPTI QDYLNRPRPT WEEVKKQLEN bmy_18164T0/1-249 MGKRDNRVAY MNPIAMARWR GPSQSAGPTI QDYLNRPRPT WEEVKKQLEN BACU010866/1-249 MGKRDNRVAY MNPIAMARWR GPSQSAGPTI QDYLNRPRPT WEEVKKQLEN 51 100 ENSP00000441389/1-248 KKTGSKALAE FEEKMNENWK KELEKSREKL LSGNESSSKK RERKKKRKKK ENSBTAP00000014983/1-163 KKKGSKALAE FEEKMNENWK KELEKSREKL LSGNESLSKK RDRKKKKKKK ENSTTRP00000003359/1-249 KKKGSKALAE FEEKMNENWK KELEKSREKL LSGNESSSKK RERKKKKKKK bmy_18164T0/1-249 KKKGSKALAE FEEKMNENWK KELEKSREKL LSGNESSSKK RERKKKKKKK BACU010866/1-249 KKKGSKALAE FEEKMNENWK KELEKSREKL LSGNESSSKK RERKKKKKKK 101 150 ENSP00000441389/1-248 SCRSSSSSS- SSDSSSSSSD SEDEEKKQGK RRKKKKNRSY KSSQSSTHES ENSBTAP00000014983/1-163 SCRSSSSSSL SSDSSSSSPD SEDEEKKEGK KRKKKKNHSY KSSESSPCDS ENSTTRP00000003359/1-249 SCQSSSSSTS SSDSSSSSSD SEDEEKKQGK KRKKKKNRSY KSSESCTCES bmy_18164T0/1-249 SCQSSSSSTS SSDSSSSSSD SEDEEKKQGK KRKKKKNRSY KSSESSTCES BACU010866/1-249 SCQSSSSSTS SSDSSSSSSD SEDEEKKQGK KRKKKKNRSY KSSESSTCES 151 200 ENSP00000441389/1-248 ESESKESVKK KKKSKDETEK EKDVRSLSKK RKKSYPDDKP LSSESSSESD ENSBTAP00000014983/1-163 ESESKESVKK KKK------- ---------- ---------- ---------- ENSTTRP00000003359/1-249 ESESKESVKK KKKSKDETGK EKYIRSLSKK RKKTCPEGKP LSSESSSESD bmy_18164T0/1-249 ESESKESVKK KKKSKDETEK EKYIRSLSKK RKKTCPEDKP LLSESSTESD BACU010866/1-249 ESESKESVKK KKKSKDETEK EKYIRSLSKK RKKTCPEDKP LSSESSSESD 201 250 ENSP00000441389/1-248 YEEDVQAKKK RRCEEREQAK EKVKKKKKKQ HKKHSKKKKK KSGSSHKSR ENSBTAP00000014983/1-163 ---------- ---------- ---------- ---------- --------- ENSTTRP00000003359/1-249 YEEEVQAKKK RRCEEREKAM EKAKKKKKKQ HKKHSKKKKK KSGSSHKSG bmy_18164T0/1-249 YEEEVQAKKK RRREEREKAT EKAKKKKKKQ HKKHSKKKKK KSGSNHKSG BACU010866/1-249 YEEEVQAKKK RRREEREKAT EKAKKKKKKQ HKKHSKKKKK KSGSNHKSG