KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:54:15 2014 Check: 00 .. Name: ENSP00000356476/1-733 Len: 766 Check: 7437 Weight: 1.00 Name: ENSTTRP00000005578/1-734 Len: 766 Check: 4730 Weight: 1.00 Name: ENSBTAP00000014994/1-737 Len: 766 Check: 3975 Weight: 1.00 Name: bmy_04390T0/1-737 Len: 766 Check: 5266 Weight: 1.00 // 1 50 ENSP00000356476/1-733 MENMAEEELL PLEK---EEV EVAQVQVPTP ARDSAGVPAP APDS------ ENSTTRP00000005578/1-734 MENMAEEELL PQEKE--EEV EVAQVQVPTP APDSARVPAP APDS------ ENSBTAP00000014994/1-737 MENMAEEELL PQEK-----V EVVQVPVPTP TPDSARVPAP APDSAPVSAS bmy_04390T0/1-737 MENMAEEELL PQEKEEDEEV EVAQVQVPTP APDSARVPAP APDS------ 51 100 ENSP00000356476/1-733 --ALDSAPTP ASAPAPAPAL AQAPALSPSL ASAPEEAKSK RHISIQRQLA ENSTTRP00000005578/1-734 --APASAPTP ASAPVPAPAL AQAPTLSPSL ASAPDEAESK RHISIQRQLA ENSBTAP00000014994/1-737 TPAPASAPTP ASAPVPAPAL AQASALSPSL ASAPDEAESK RHISIQRQLA bmy_04390T0/1-737 --APASAPTP ASAPVPAPAL AQAPTLSPSL ASAPDEAESK RHISIQRQLA 101 150 ENSP00000356476/1-733 DLENLAFVTD GNFDSASSLN SDNLDAGNRQ ACPLCPKEKF RACNSHKLRR ENSTTRP00000005578/1-734 DLEKLAFVTE GDFDSASSLN SDNLDAGNKQ ACPLCPKEKF RACNSHKLHR ENSBTAP00000014994/1-737 DLEKLAFVTE GDCDSANSLN SDNLDAGNKQ ACPLCPKEKF RACNSHKLHR bmy_04390T0/1-737 DLEKLAFVTE GDFDSASSLN SDNLDAGNKQ ACPLCPKEKF RACNSHKLHR 151 200 ENSP00000356476/1-733 HLQNLHWKVS VEFEGYRMCI CHLPCRPVKP NIIGEQITSK MGAHYHCIIC ENSTTRP00000005578/1-734 HLQNLHWKVS VEFEGYKMCI CHLPCRPVKP NIIGEQXXXX XXXXXXXXXX ENSBTAP00000014994/1-737 HLQNLHWKVS VEFEGYRMCI CHLPCRPVKP NIIGEQISSK MGAHYHCIIC bmy_04390T0/1-737 HLQNLHWKVS VEFEGYRMCI CHLPCRPVKP NIIGEQISSK MGAHYHCIIC 201 250 ENSP00000356476/1-733 SATITRRTDM LGHVRRHMNK GETKSSYIAA STAKPPKEIL KEADTDVQVC ENSTTRP00000005578/1-734 XXXITRRTDM LGHVRRHVNK GETKSTYIAA SAAKPPNEIL KESDTDVQVC ENSBTAP00000014994/1-737 SATITRRTDM LGHVRRHVNK GETKSRYIAA SAAKPPKEIL KEADTDVQVC bmy_04390T0/1-737 SATITRRTDM LGHVRRHVNK GETKSTYIAA SAAKPPNEIL KEADTDVQVC 251 300 ENSP00000356476/1-733 PNYSIPQKTD SYFNPKMKLN RQLIFCTLAA LAEERKPLEC LDAFGATGIM ENSTTRP00000005578/1-734 PNYSVPQKTD SYFNPKMKLN RQLIFCTLAA LAKERKPLEC LDAFGATGIM ENSBTAP00000014994/1-737 PNYTVPQKTD SYFNPKMKLN RQLIFCTLAA LAKERKPLEC LDAFGATGIM bmy_04390T0/1-737 PNYSVPQKTD SYFNPKMKLN RQLIFCTLAA LAKERKPLEC LDAFGATGIM 301 350 ENSP00000356476/1-733 GLQWAKHLGN AVKVTINDLN ENSVTLIQEN CHLNKLKVVV DSKEKEKSDD ENSTTRP00000005578/1-734 GLQWAKHLGN AVKVTINDLN ENSVTLIQEN CHLNKLKVVV DCKEKEESDD ENSBTAP00000014994/1-737 GLQWAKHLGN AVKVTINDLN ENSVTLIQEN CHLNKLKVVV DSKEKEERED bmy_04390T0/1-737 GLQWAKHLGN AVKVTINDLN ENSVTLIQEN CHLNKLKVVV DSKEKEESDD 351 400 ENSP00000356476/1-733 ILEEGEKNLG NIKVTKMDAN VLMHLRSFDF IHLDPFGTSV NYLDSAFRNI ENSTTRP00000005578/1-734 TPEEGEENFG NIKVTKMDAN VLMHLRSFDF IHLDPFGTSV NYLDSAFRNI ENSBTAP00000014994/1-737 ILEEGEENLG NIKVTKMDAN VLMHLRSFDF IHLDPFGTSV NYLDSAFRNI bmy_04390T0/1-737 IPEEGEENFG NIKVTKMDAN VLMHLRSFDF IHLDPFGTSV NYLDSAFRNI 401 450 ENSP00000356476/1-733 RNLGIVSVTS TDISSLYAKA QHVARRHYGC NIVRTEYYKE LAARIVVAAV ENSTTRP00000005578/1-734 RNLGIVSVTS TDISSLYAKA QHVARRHYGC NIVRTEYYKE LAARIVVAAV ENSBTAP00000014994/1-737 RNLGIVSVTS TDISSLYAKA QHVARRHYGC NIVRTEYYKE LAARIVVAAV bmy_04390T0/1-737 RNLGIVSVTS TDISSLYAKA QHVARRHYGC NIVRTEYYKE LAARIVVAAV 451 500 ENSP00000356476/1-733 ARAAARCNKG IEVLFAVALE HFVLVVVRVL RGPTSADETA KKIQYLIHCQ ENSTTRP00000005578/1-734 ARAAARCNKG IEVLFAVALE HFVLVVVRVL RGPTSADETA KKIQYLIHCQ ENSBTAP00000014994/1-737 ARAAARCNKG IEVLFAVALE HFVLVVVRVL RGPTSADETA KKIQYLIHCQ bmy_04390T0/1-737 ARAAARCNKG IEVLFAVALE HFVLVVVRVL RGPTSADETA KKIQYLIHCQ 501 550 ENSP00000356476/1-733 WCEERIFQKD GNMVEE---- ---------- --------NP YRQLPCNCHG ENSTTRP00000005578/1-734 WCEERIFQKD GNMVEE---- ---------- --------NP YRQLPCNCHG ENSBTAP00000014994/1-737 WCEERIFQKD GNMVEE---- ---------- --------NP YRQLPCNCHG bmy_04390T0/1-737 WCEERIFQKD GNMVEDYSAN FISYTGFPFI NRQDIRVKNP YRQLPCNCHG 551 600 ENSP00000356476/1-733 SMPGKTAIEL GPLWSSSLFN TGFLKRMLFE SLHHGLDDIQ TLIKTLIFES ENSTTRP00000005578/1-734 SMPGKTAIEL GPLWSSSLFN TGFLKRMLFE SLHHGLDDIQ TLIKTLIFES ENSBTAP00000014994/1-737 SMPGKTAIEL GPLWSSSLFN TGFLKRMLSE SLHHGLDDIQ TLIKTLIFES bmy_04390T0/1-737 SMPGKTAIEL GPLWSSSLFN TGFLKRMLFE SLHHGLDDIQ TLIKTLIFES 601 650 ENSP00000356476/1-733 ECTPQSQFSI HASSNVNKQE ENGVFIKTTD DTTTDNYIAQ GKRKSNEMIT ENSTTRP00000005578/1-734 ECTPQSQFSV HAPSNLNKQE EYGVFIKTTD DTTTDNYIAQ GKRRSNETTT ENSBTAP00000014994/1-737 ECTPQ--FSV HAPSNLNKQE ECGVFIKTTD DTTTDSHSAQ GKRKSNETTA bmy_04390T0/1-737 ECTPQSQFSV HAPSNLNK-- ---------- ---------Q GKRRSNETTT 651 700 ENSP00000356476/1-733 NLGKKQKTDV STEHPPFYYN IHRHSIKGMN MPKLKKFLCY LSQAGFRVSR ENSTTRP00000005578/1-734 NLAKRQKTDV NTEHPPFYYN IHRHSIKGMN MPKLKKFLCC LSQAGFRVSR ENSBTAP00000014994/1-737 NLVKRQKTDV NTEHPPFYYN IHRHSIKGMN MPKLKKFLCY LSQAGFRVSR bmy_04390T0/1-737 NLAKRQKTDV NTEHPPFYYN IHRHSIKGMN MPKLKKFLCC LSQAGFRVSR 701 750 ENSP00000356476/1-733 THFDPMGVRT DAPLMQFKSI LLKYSTPTYT GGQSESHVQS ASEDTVTERV ENSTTRP00000005578/1-734 THFDPMGVRT DAPLIQFKSI LLKYSTPTYT GGQSEGHVQP ASEDTVADTV ENSBTAP00000014994/1-737 THFDPMGVRT DAPLMQFKSI LLKYSTPTYT GGQSEGHVQP ASEDTVADRV bmy_04390T0/1-737 THFDPMGVRT DAPLMQFKSI LLKYSTPTYT GGQSEGHVQP ASEDTVADGV 751 800 ENSP00000356476/1-733 EMSVNDKAEA SGCRRW ENSTTRP00000005578/1-734 EMSVNDKAEA SGCRRW ENSBTAP00000014994/1-737 EMSVNDKAEA GGCRRW bmy_04390T0/1-737 ETSVNDKAEA SGCRRW