KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:18 2014 Check: 00 .. Name: ENSTTRP00000007459/1-843 Len: 898 Check: 6801 Weight: 1.00 Name: BACU011084/1-366 Len: 898 Check: 6018 Weight: 1.00 Name: bmy_08448T0/1-471 Len: 898 Check: 4302 Weight: 1.00 Name: ENSP00000363480/1-817 Len: 898 Check: 9228 Weight: 1.00 Name: ENSBTAP00000015000/1-817 Len: 898 Check: 9647 Weight: 1.00 // 1 50 ENSTTRP00000007459/1-843 MHKHQHCCKC PECYEVTRLA ALRRLEPPGY GXXXXXXXXX XXXXXXXXXX BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 MHKHQHCCKC PECYEVTRLA ALRRLEPPGY GDWQVPDPYG PGGGNGASAG ENSP00000363480/1-817 MHKHQHCCKC PECYEVTRLA ALRRLEPPGY GDWQVPDPYG PGGGNGASAG ENSBTAP00000015000/1-817 MHKHQHCCKC PECYEVTRLA ALRRLEPPSY GDWQVPDPYG PGGGNGASAG 51 100 ENSTTRP00000007459/1-843 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 YGGYSSQTLP SQAGATPTPR TKAKLIPTGR DVGPVPPKPV PGKSTPKLNG ENSP00000363480/1-817 YGGYSSQTLP SQAGATPTPR TKAKLIPTGR DVGPVPPKPV PGKSTPKLNG ENSBTAP00000015000/1-817 YGGYSSQTLP SQAGATPTPR TKAKLIPTGR DVGPVPPKPV PGKSTPKLNG 101 150 ENSTTRP00000007459/1-843 XXXXXXXXXX CT-RDWYEQA SPAPLLVNPE LL-----VNG SDGMFKYEEI BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 SGPSWWPECT CTNRDWYEQA SPAPLLVNPE ALEPILLVNG SDGMFKYEEI ENSP00000363480/1-817 SGPSWWPECT CTNRDWYEQ- ---------- -------VNG SDGMFKYEEI ENSBTAP00000015000/1-817 SGPSWWPECT CTGRDWYEQ- ---------- -------VNG SDGMFKYEEI 151 200 ENSTTRP00000007459/1-843 VLERGNSGLG FSIAGGIDNP HVPDDPGIFI TKIIPGGAAA MDGRLGVNDC BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 VLERGNSGLG FSIAGGIDNP HVPDDPGIFI TKIIPGGAAA MDGRLGVNDC ENSP00000363480/1-817 VLERGNSGLG FSIAGGIDNP HVPDDPGIFI TKIIPGGAAA MDGRLGVNDC ENSBTAP00000015000/1-817 VLERGNSGLG FSIAGGIDNP HVPDDPGIFI TKIIPGGAAA MDGRLGVNDC 201 250 ENSTTRP00000007459/1-843 VLRVNEVDVS EVVHSRAVEA LKEAGPVVRL VVRRRQPPPE TIMEVNLLKG BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 VLRVNEVDVS EVVHSRAVEA LKEAGPVVRL VVRRRQPPPE TIMEVNLLKG ENSP00000363480/1-817 VLRVNEVDVS EVVHSRAVEA LKEAGPVVRL VVRRRQPPPE TIMEVNLLKG ENSBTAP00000015000/1-817 VLRVNEVDVS EVVHSRAVEA LKEAGPVVRL VVRRRQPPPE TIMEVNLLKG 251 300 ENSTTRP00000007459/1-843 PKGLGFSIAG GIGNQHIPGD NSIYITKIIE GGAAQKDGRL QIGDRLLAVN BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 PKGLGFSIAG GIGNQHIPGD NSIYITKIIE GGAAQKDGRL QIGDRLLAVR ENSP00000363480/1-817 PKGLGFSIAG GIGNQHIPGD NSIYITKIIE GGAAQKDGRL QIGDRLLAVN ENSBTAP00000015000/1-817 PKGLGFSIAG GIGNQHIPGD NSIYITKIIE GGAAQKDGRL QIGDRLLAVN 301 350 ENSTTRP00000007459/1-843 NTNLQDVRHE EAVASLKNTS DMVYLKVAKP GSLHLNDMYA PPDYASTFTA BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 QPS------- ---------- ---------- ---------- -RGCPNAFTA ENSP00000363480/1-817 NTNLQDVRHE EAVASLKNTS DMVYLKVAKP GSLHLNDMYA PPDYASTFTA ENSBTAP00000015000/1-817 NTNLQDVRHE EAVASLKNTS DMVYLKVAKP GSLHLNDMYA PPDYASTFTA 351 400 ENSTTRP00000007459/1-843 LADNHISHNS SLGYLGAVES KVSYPAPPQV PPARYSPIPR HMLAEEDFTR BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 LADNHISHNS SLGYLGAVES KVTYPAPPQV PPARYSPIPR HMLAEEDFTR ENSP00000363480/1-817 LADNHISHNS SLGYLGAVES KVSYPAPPQV PPTRYSPIPR HMLAEEDFTR ENSBTAP00000015000/1-817 LADNHISHNS SLGYLGAVES KVSYPAPPQV PPARYSPIPR HMLAEEDFTR 401 450 ENSTTRP00000007459/1-843 ---------- --------EP RKIILHKGST GLGFNIVGGE DGEGIFVSFI BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 VQITPVGRMG ESGEEEDQEP RKIILHKGST GLGFNIVGGE DGEGIFVSFI ENSP00000363480/1-817 ---------- --------EP RKIILHKGST GLGFNIVGGE DGEGIFVSFI ENSBTAP00000015000/1-817 ---------- --------EP RKIILHKGST GLGFNIVGGE DGEGIFVSFI 451 500 ENSTTRP00000007459/1-843 LAGGPADLSG ELRRGDRILS VNGVNLRNAT HEQAAAALKR AGQSVTIVAQ BACU011084/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08448T0/1-471 LAGGPADLSG ELRRGDRILS VNGVNLRNAT HEQAAAALKR AGQSVTIVAQ ENSP00000363480/1-817 LAGGPADLSG ELRRGDRILS VNGVNLRNAT HEQAAAALKR AGQSVTIVAQ ENSBTAP00000015000/1-817 LAGGPADLSG ELRRGDRILS VNGVNLRNAT HEQAAAALKR AGQSVTIVAQ 501 550 ENSTTRP00000007459/1-843 YRPEEYSRFE SKIHDLREQM MNSSMSSGSG SLRTSEKRSL YVRALFDYDR BACU011084/1-366 ---------- ---------M MNSSMSSGSG SLRTSEKRSL YVRALFDYDR bmy_08448T0/1-471 YRPE------ ---------- ---------- ---------- ---------- ENSP00000363480/1-817 YRPEEYSRFE SKIHDLREQM MNSSMSSGSG SLRTSEKRSL YVRALFDYDR ENSBTAP00000015000/1-817 YRPEEYSRFE SKIHDLREQM MNSSMSSGSG SLRTSEKRSL YVRALFDYDR 551 600 ENSTTRP00000007459/1-843 TRDSCLPSQG LSFSYGDILH VINASDDEWW QARLVTPHGE SEQIGVIPSK BACU011084/1-366 TRDSCLPSQG LSFSYGDILH VINASDDEWW QARLVTRHGE SEQIGVIPSK bmy_08448T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSP00000363480/1-817 TRDSCLPSQG LSFSYGDILH VINASDDEWW QARLVTPHGE SEQIGVIPSK ENSBTAP00000015000/1-817 TRDSCLPSQG LSFSYGDILH VINASDDEWW QARLVTPHGE SEQIGVIPSK 601 650 ENSTTRP00000007459/1-843 KRVEKKERAR LKTVKFHART GMIESNRXX- ---------- ---------- BACU011084/1-366 KRVEKKERAR LKTVKFHART GMIESNRSIK TKRKKSFRLS RKFPFYKSKE bmy_08448T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSP00000363480/1-817 KRVEKKERAR LKTVKFHART GMIESNRDF- ---------- ---------- ENSBTAP00000015000/1-817 KRVEKKERAR LKTVKFHART GMIESNRDF- ---------- ---------- 651 700 ENSTTRP00000007459/1-843 ---------- XXXXXXXXXX XXXXXXXXXX XXXXXXXXGQ EDAILSYEPV BACU011084/1-366 NMAQESSVQE QGVTSNTS-- ---------- -DSESSSKGQ EDAILSYEPV bmy_08448T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSP00000363480/1-817 ---------- PGLSDDYY-- ---------- --GAKNLKGQ EDAILSYEPV ENSBTAP00000015000/1-817 ---------- PGLSDDYY-- ---------- --GAKNLKGQ EDAILSYEPV 701 750 ENSTTRP00000007459/1-843 TRQEIHYARP VIILGPMKDR VNDDLISEFP HKFGSCVPHT TRPRRDNEVD BACU011084/1-366 TRQEIHYARP VIILGPMKDR VNDDLISEFP HKFGSCVPHT TRPRRDNEVD bmy_08448T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSP00000363480/1-817 TRQEIHYARP VIILGPMKDR VNDDLISEFP HKFGSCVPHT TRPRRDNEVD ENSBTAP00000015000/1-817 TRQEIHYARP VIILGPMKDR VNDDLISEFP HKFGSCVPHT TRPRRDNEVD 751 800 ENSTTRP00000007459/1-843 GQDYHFVVSR EQMEKDIQDN KFIEAGQFND NLYGTSIQSV RAVAERGKHC BACU011084/1-366 GQDYHFVVSR EQMEKDIQDN KFIEAGQFND NLYGTSIQSV RAVAERGKHC bmy_08448T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSP00000363480/1-817 GQDYHFVVSR EQMEKDIQDN KFIEAGQFND NLYGTSIQSV RAVAERGKHC ENSBTAP00000015000/1-817 GQDYHFVVSR EQMEKDIQDN KFIEAGQFND NLYGTSIQSV RAVAERGKHC 801 850 ENSTTRP00000007459/1-843 ILDVSGNAIK RLQQSQLYPI AIFIKPKSIE ALMEMNRRQT YEQANKIYDK BACU011084/1-366 ILDVSGNAIK RLQQSQLYPI AIFIKPKSIE ALMEMNRRQT YEQANKIYDK bmy_08448T0/1-471 -----GNKAT ---------- ---------- ---------- ---------- ENSP00000363480/1-817 ILDVSGNAIK RLQQAQLYPI AIFIKPKSIE ALMEMNRRQT YEQANKIYDK ENSBTAP00000015000/1-817 ILDVSGNAIK RLQQSQLYPI AIFIKPKSIE ALMEMNRRQT YEQANKIYDK 851 900 ENSTTRP00000007459/1-843 AMKLEQEFGE YFTAIVQGDS LEEIYNKIKQ IIEDQSGHYI WVPSPEKL BACU011084/1-366 AMKLEQEFGE YFTAIVQGDS LEEIYNKTKQ IIEDQSGHYI WVPSPEKL bmy_08448T0/1-471 ---------- ---------- ---------- ---------- -------- ENSP00000363480/1-817 AMKLEQEFGE YFTAIVQGDS LEEIYNKIKQ IIEDQSGHYI WVPSPEKL ENSBTAP00000015000/1-817 AMKLEQEFGE YFTAIVQGDS LEEIYNKIKQ IIEDQSGHYI WVPSPEKL