KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:19 2014 Check: 00 .. Name: ENSP00000215739/1-840 Len: 1503 Check: 1306 Weight: 1.00 Name: ENSBTAP00000015001/1-840 Len: 1503 Check: 8126 Weight: 1.00 Name: BACU017122/1-1360 Len: 1503 Check: 1298 Weight: 1.00 Name: bmy_14710T0/1-1436 Len: 1503 Check: 9760 Weight: 1.00 Name: ENSTTRP00000008702/1-840 Len: 1503 Check: 9532 Weight: 1.00 // 1 50 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 MGGCFSK--- ---------- ---------- ---------- ---------- bmy_14710T0/1-1436 MLGTQTPPGV QGQRAPLPPT ASHPDPGRSH LRGRPAVLGP RAPAALSPQR ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 ---------- ---------- --PKPVELKI EVVLPEKDRG KEELSTGGKG bmy_14710T0/1-1436 RPRPACPARP AAAPAAPERR YAPSAVELKI EVVLPEKDRG KEELSAGGKG ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 SPRAYQGQGT ACHFHAEERL PAPHPYPGAQ DCVEAAVCHI KDLENGQMRE bmy_14710T0/1-1436 SPRAYQGNGT ACHFHAEERL PAPHPYPGAQ DCVEAAVCHI KDLENGQIRE ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 VELGWGKVLL VKDNGEFHAL GHKCPHYGAP LVKGVLSRGR VRCPWHGACF bmy_14710T0/1-1436 VELGWGKVLL VKDNGEFHAL GHKCPHYGAP LVKGVLSRGR VRCPWHGACF ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 NISTGDLEDF PGLDSLHKFQ VKIEKEKVYV RASKQALQLQ RRTKVMATCI bmy_14710T0/1-1436 NISTGDLEDF PGLDSLHKF- ---------- ----QALQLQ RRTKVMATCI ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 SPSTGHSSST NVLIVGTGAA GLVCAETLRQ EGFSDRIVLC TLDRHLPYDR bmy_14710T0/1-1436 SPSAGHSSST NVLIVGAGAA GLVCAETLRQ EGFSDRIVLC TLDRHLPYDR ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 PKLSKSLDAQ PEQLALRPKE FFRAHGIEVL TEAQVVTVDV RNKKAVFKDG bmy_14710T0/1-1436 PKLSKSLDAQ PEQLALRPKE FFRAHGIEVL TEAQVVTVDV RNKKAVFKDG ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 FKLEYSKLLL APGSSPKTLS CKGKDVENVF TIRTPEDANR VVRLARGRNA bmy_14710T0/1-1436 FKLEYSKLLL APGSSPKTLS CKGKDVENVF TIRTPEDANR VVRLARGCNA ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 VVVGAGFLGM EVAAYLTEKA HSVSVVELEE TPFRRFLGER VGRALMKMFE bmy_14710T0/1-1436 VVVGAGFLGM EVAAYLTEKA HSVSVVELEE TPFRRFLGER VGRALMKMFE ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 SNRVKFYMQT EVSELRAQEG KLKEVVLKSS KVLRADVCVV GIGAVPATGF bmy_14710T0/1-1436 SNRVKFYMQT EVSELRAQEG KLKEVVLKSS KVLRADVCVV GIGAVPATGF ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 LRQSGIGLDS RGFIPVNKMM QTNVPGVFAA GDAVTFPLAW RNNRKVNIPH bmy_14710T0/1-1436 LRQSGIGLDS RGFIPVNKMM QTNVPGVFAA GDAVTFPLAW RNNRKVNIPH ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 WQMAHAQGRV AAQNMLAQEA EISTVPYLWT AMFSKSLRYA GYGEGFDDVI bmy_14710T0/1-1436 WQMAHAQGRV AAQNMLAQEA EISTVPYLWT AMFSKSLRYA GYGEGFDDVI ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000215739/1-840 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015001/1-840 ---------- ---------- ---------- ---------- ---------- BACU017122/1-1360 IQGDLDELKF VAFYTKGDEV ISVASMNYDP IVSKVAE--- ---------- bmy_14710T0/1-1436 IQGDLDELKF VAFYTKGDEV ISVASMNYDP IVSKVAESLG GGPGRWLHVP ENSTTRP00000008702/1-840 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000215739/1-840 ---------- -MAGPGSTGG QIGAAALAGG ARSKVAPSVD FDHSCSDSVE ENSBTAP00000015001/1-840 ---------- -MAGPGGSGG PIGAGALAGG ARSKVAPSVD FDHSCSDSVE BACU017122/1-1360 ---------- ---------- -----VLASG -RTIRKREVE ---------- bmy_14710T0/1-1436 RTWWPIGRGP GMAGPGGSGG PIGSGALAGG ARSKVAPSVD FDHSCSDSVE ENSTTRP00000008702/1-840 ---------- -MAGPGGSGG PIGTGALAGG ARSKVAPSVD FDHSCSDSVE 701 750 ENSP00000215739/1-840 YLTLNFGPFE TVHRWRRLPP CDEFVGARRS KHTVVAYKDA IYVF-GGDNG ENSBTAP00000015001/1-840 YLTLNFGPFE TVHRWRRLPP CDEFVGARCG EHTLRA-DDS IHVCKGGSSR BACU017122/1-1360 ---------- ---------- --------RS KHTVVAYKDA IYVF-GGDNG bmy_14710T0/1-1436 YLTLNFGPFE TVHRWRRLPP CDEFVGARRS KHTVVAYKDA IYVF-GGDNG ENSTTRP00000008702/1-840 YLTLNFGPFE TVHRWRRLPP CDEFVGARRS KHTVVAYKDA IYVF-GGDNG 751 800 ENSP00000215739/1-840 KTMLNDLLRF DVKDCSWCRA FTTGTPPAPR YHHSAVVYGS SMFVFGGYTG ENSBTAP00000015001/1-840 KTMLNDLLRF DVKDCSWCRA FTTGTPPAPR YHHSAVVYGS SMFVFGGYTG BACU017122/1-1360 KTMLNDLLRF DVKDCSWCRA FTTGTPPAPR YHHSAVVYGS SMFVFGGYTG bmy_14710T0/1-1436 KTMLNDLLRF DVKDCSWCRA FTTGTPPAPR YHHSAVVYGS SMFVFGGYTG ENSTTRP00000008702/1-840 KTMLNDLLRF DVKDCSWCRA FTTGTPPAPR YHHSAVVYGS SMFVFGGYTG 801 850 ENSP00000215739/1-840 DIYSNSNLKN KNDLFEYKFA TGQWTEWKIE GRLPVARSAH GATVYSDKLW ENSBTAP00000015001/1-840 DIYSNSNLKN KNDLFEYKFA TGQWTEWKIE GRLPVARSAH GATVYSDKLW BACU017122/1-1360 DIYSNSNLKN KNDLFEYKFA TGQWTEWKIE GRLPVARSAH GATVYSDKLW bmy_14710T0/1-1436 DIYSNSNLKN KNDLFEYKFA TGQWTEWKIE GRLPVARSAH GATVYSDKLW ENSTTRP00000008702/1-840 DIYSNSNLKN KNDLFEYKFA TGQWTEWKIE GRLPVARSAH GATVYSDKLW 851 900 ENSP00000215739/1-840 IFAGYDGNAR LNDMWTIGLQ DRELTCWEEV AQSGEIPPSC CNFPVAVCRD ENSBTAP00000015001/1-840 IFAGYDGNAR LNDMWTIGLQ DRELTCWEEV AQSGEIPPSC CNFPAAVCRD BACU017122/1-1360 IFAGYDGNAR LNDMWTIGLQ DRELTCWEEV AQSGEIPPSC CNFPAAVCRD bmy_14710T0/1-1436 IFAGYDGNAR LNDMWTIGLQ DRELTCWEEV AQSGEIPPSC CNFPAAVCRD ENSTTRP00000008702/1-840 IFAGYDGNAR LNDMWTIGLQ DRDLTCWEEV AQSGEIPPSC CNFPAAVCRD 901 950 ENSP00000215739/1-840 KMFVFSGQSG AKITNNLFQF EFKDKTWTRI PTEHLLRGSP PPPQRRYGHT ENSBTAP00000015001/1-840 RMFVFSGQSG AKITNNLFQF EFKDQTWTRI PTEHLLRGSP PPPQRRYGHT BACU017122/1-1360 RMFVFSGQSG AKITNNLFQF EFKNKTWTRI PTEHLLRGSP PPPQRRYGHT bmy_14710T0/1-1436 RMFVFSGQSG AKITNNLFQF EFKNKTWTRI PTEHLLRGSP PPPQRRYGHT ENSTTRP00000008702/1-840 RMFVFSGQSG AKITNNLFQF EFKNKTWTRI PTEHLLRGSP PPPQRRYGHT 951 1000 ENSP00000215739/1-840 MVAFDRHLYV FGGAADNTLP NELHCYDVDF QTWEVVQPSS DSEVGGAEVP ENSBTAP00000015001/1-840 MVAFDRHLYV FGGAADNTLP NELHCYDVDF QTWEVIQPSS DSEVGGAEMP BACU017122/1-1360 MVAFDRHLYV FGGAADNTLP NELHCYDVDF QTWEVIQPSS DSEVSGAEMP bmy_14710T0/1-1436 MVAFDRHLYV FGGAADNTLP NELHCYDVDF QTWEVIQPSS DSEVSGAEMP ENSTTRP00000008702/1-840 MVAFDRHLYV FGGAADNTLP NELHCYDVDF QTWEVIQPSS DSEVSGAEMP 1001 1050 ENSP00000215739/1-840 ERACASEEVP TLTYEERVGF KKSRDVFGLD FGTTSAKQPT QPASELPSGR ENSBTAP00000015001/1-840 ERASASEEVP APGSEERAGC KKSRDVFGLD FGSTTSRQPS LPASELPSGR BACU017122/1-1360 ERASTSEEAP ALGSEERGGC KKSRDVFGLD FGSTTTRQPT LPASELPSGR bmy_14710T0/1-1436 ERASASEEAP ALGSEERGGC KKSRDVFGLD FGSTTTRQPT LPASELPSGR ENSTTRP00000008702/1-840 ERASASEEAP ALGSEERGGC KKSRDVFGLD FGSTTTRQPT LPASELPSGR 1051 1100 ENSP00000215739/1-840 LFHAAAVISD AMYIFGGTVD NNIRSGEMYR FQFSCYPKCT LHEDYGRLWE ENSBTAP00000015001/1-840 LFHAAAVISD AMYIFGGTVD NNIRSGEMYR FQFSCYPKCT LHEDYGRLWE BACU017122/1-1360 LFHAAAVISD AMYIFGGTVD NNIRSGEMYR FQFSCYPKCT LHEDYGRLWE bmy_14710T0/1-1436 LFHAAAVISD AMYIFGGTVD NNIRSGEMYR FQFSCYPKCT LHEDYGRLWE ENSTTRP00000008702/1-840 LFHAAAVISD AMYIFGGTVD NNIRSGEMYR FQFSCYPKCT LHEDYGRLWE 1101 1150 ENSP00000215739/1-840 SRQFCDVEFV LGEKEECVQG HVAIVTARSR WLRRKITQAR ERLAQKLEQE ENSBTAP00000015001/1-840 SRQFCDVEFV LGEKEERVQG HVAIVTARSR WLRRKIAQAR VRPLQKLEEE BACU017122/1-1360 SRQFCDVEFV LGEKEDCVQG HVAIVTARSR WLRRKIVQAR ERLTQKLEEE bmy_14710T0/1-1436 SRQFCDVEFV LGEKEECVQG HVAIVTARSR WLRRKIVQAR ERLTQKLEEE ENSTTRP00000008702/1-840 SRQFCDVEFV LGEKEECVQG HVAIVTARSR WLRRKIVQAR ERLTQKLEEE 1151 1200 ENSP00000215739/1-840 AAPVPREAPG VAAGGARPPL LHVAIREAEA RPFEVLMQFL YTDKIKYPRK ENSBTAP00000015001/1-840 AAPAPREGPA AAAGAARPAL LRVAIREAEA RPFEVLMQFL YTDKIQYPRK BACU017122/1-1360 AAPALREGPS GAAGGARPPL LRVAIREAEA RSFEVLMQFL YTDKIKYPRK bmy_14710T0/1-1436 AAPALREGPA GAAGGARPPL LRVAIREAEA RPFEVLMQFL YTDKIKYPRK ENSTTRP00000008702/1-840 AAPALREGPA GAAGGARPPL LRVAIREAEA RPFEVLMQFL YTDKIKYPRK 1201 1250 ENSP00000215739/1-840 GHVEDVLLIM DVYKLALSFQ LCRLEQLCRQ YIEASVDLQN VLVVCESAAR ENSBTAP00000015001/1-840 GHVEDVLLIM DVYKLALGFQ LCRLEQLCRQ YIEASVDLQN VLVVCESAAR BACU017122/1-1360 GHVEDVLLIM DVYKLALGFQ LCRLEQLCRQ YIEASVDLQN VLVVCESAAR bmy_14710T0/1-1436 GHVEDVLLIM DVYKLALGFQ LCRLEQLCRQ YIEASVDLQN VLVVCESAAR ENSTTRP00000008702/1-840 GHVEDVLLIM DVYKLALGFQ LCRLEQLCRQ YIEASVDLQN VLVVCESAAR 1251 1300 ENSP00000215739/1-840 LQLSQLKEHC LNFVVKESHF NQVIMMKEFE RLSSPLIVEI VRRKQQPPPR ENSBTAP00000015001/1-840 LQLGQLKEHC LNFVVKESHF NQVIMMKEFE RLSSPLIVEI VRRKQQPPPR BACU017122/1-1360 LQLGQLKEHC LNFVVKESHF NQVIMMKEFE RLSSPLIVEI VRRKQQPPPR bmy_14710T0/1-1436 LQLGQLKEHC LNFVVKESHF NQVIMMKEFE HLSSPLIVEI VRRKQQPPPR ENSTTRP00000008702/1-840 LQLGQLKEHC LNFVVKESHF NQVIMMKEFE RLSSPLIVEI VRRKQQPPPR 1301 1350 ENSP00000215739/1-840 TPLDQPVDIG TSLIQDMKAY LEGAGAEFCD ITLLLDGHPR PAHKAILAAR ENSBTAP00000015001/1-840 APSDQPVDIG TSLIQDMKAY LEGAGAEFCD ITLLLDGHPR PAHKAILAAR BACU017122/1-1360 APSDQPVDIG TSLIQDMKAY LEGAGAEFCD ITLLLDGHPR PAHKAILAAR bmy_14710T0/1-1436 APSDQPVDIG TSLIQDMKAY LEGAGAEFCD ITLLLDGHPR PAHKAILAAR ENSTTRP00000008702/1-840 APSDQPVDIG TSLIQDMKAY LEGAGAEFCD ITLLLDGHPR PAHKAILAAR 1351 1400 ENSP00000215739/1-840 SSYFEAMFRS FMPEDGQVNI SIGEMVPSRQ AFESMLRYIY YGEVNMPPED ENSBTAP00000015001/1-840 SSYFEAMFRS FMPEDGQVNI SIGEMVPSRQ AFESMLRYIY YGEVNMPPED BACU017122/1-1360 SSYFEAMFRS FMPEDGQVNI SIGEMVPSRQ AFESMLRYIY YGEVNMPPED bmy_14710T0/1-1436 SS-------- ---------- ---------- ---------- ---------- ENSTTRP00000008702/1-840 SSYFEAMFRS FMPEDGQVNI SIGEMVPSRQ AFESMLRYIY YGEVNMPPED 1401 1450 ENSP00000215739/1-840 SL-YLFAAPY YYGFYNNRLQ AYCKQNLEMN VTVQNVLQIL EAADKTQALD ENSBTAP00000015001/1-840 SL-YLFSAPY YYGFYNNRLQ AYCKQNLEMN VTVQNVLQIL EAADKTQALD BACU017122/1-1360 SLHYLFAAPY YYGFYNNRLQ AYCKQNLEMN VTVQNVLQIL EAADKTQALD bmy_14710T0/1-1436 ---YLFAAPY YYGFYNNRLQ AYCKQNLEMN VTVQNVLQIL EAADKTQALD ENSTTRP00000008702/1-840 SL-YLFAAPY YYGFYNNRLQ AYCKQNLEMN VTVQNVLQIL EAADKTQALD 1451 1500 ENSP00000215739/1-840 MKRHCLHIIV HQFTKVSKLP TLRSLSQQLL LDIIDSLASH ISDKQCAELG ENSBTAP00000015001/1-840 MKRHCLHIIV HQFTKVSKLP TLRSLSQQLL LDIIDSLASH ISDKQCAELG BACU017122/1-1360 MKRHCLHIIV HQFTKVSKLP TLRLLSQQLL LDIIDSLASH ISDKQCAELG bmy_14710T0/1-1436 MKRHCLHIIV HQFTKVSKLP TLRLLSQQLL LDIIDSLASH ISDKQCAELG ENSTTRP00000008702/1-840 MKRHCLHIIV HQFTKVSKLP TLRSLSQQLL LDIIDSLASH ISDKQCAELG 1501 1550 ENSP00000215739/1-840 ADI ENSBTAP00000015001/1-840 ADI BACU017122/1-1360 ADI bmy_14710T0/1-1436 ADI ENSTTRP00000008702/1-840 ADI