KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:22 2014 Check: 00 .. Name: ENSP00000362179/1-599 Len: 599 Check: 4964 Weight: 1.00 Name: bmy_02128T0/1-302 Len: 599 Check: 5908 Weight: 1.00 Name: ENSBTAP00000015041/1-583 Len: 599 Check: 6264 Weight: 1.00 Name: BACU009683/1-583 Len: 599 Check: 3678 Weight: 1.00 Name: ENSTTRP00000008144/1-598 Len: 599 Check: 8321 Weight: 1.00 // 1 50 ENSP00000362179/1-599 MSGPCGEKPV LEASPTMSLW EFEDSHSRQG TPRPGQELAA EEASALELQM bmy_02128T0/1-302 ---------- ------MSLW ELEDGHSCQG TPRPAQESTA EEARTAELQM ENSBTAP00000015041/1-583 ---------- ------MSLW ELEDRRSCQG TPRPAQEPTA EEATTAELQM BACU009683/1-583 ---------- ------MSLW ELEDGHSCQG TPRPAQESTA EEARTAELQM ENSTTRP00000008144/1-598 VSGRWRERPT QEA-PTMSLW ELEDGHSCRG TPRPAQESTA EEARTAELQM 51 100 ENSP00000362179/1-599 KVDFFRKLGY SSTEIHSVLQ KLGVQADTNT VLGELVKHGT ATERERQTSP bmy_02128T0/1-302 KVDFFRKLGY SSAEIHSVLQ KLGVQADTNT VLGELVKHGS AAERERQASP ENSBTAP00000015041/1-583 KVDFFRKLGY SSAEIHSVLQ KLGIQADTNT VLGELVKHGS AAERERQASP BACU009683/1-583 KVDFFRKLGY SSAEIHSVLQ KLGVQADTNT VLGELVKHGS AAERERQASP ENSTTRP00000008144/1-598 KVDFFRKLGY SSAEIHSVLQ KLGVQADTNT VLGELVKHGS AAERERQASP 101 150 ENSP00000362179/1-599 DPCPQLPLVP RGGGTPKAPN LEPPLPEEEK EGSDLRPVVI DGSNVAMSHG bmy_02128T0/1-302 DPCPQLPLVP RGGGNPKAPI LEPSPPEEDK EGSDLRPVVI DGSNVAMSHG ENSBTAP00000015041/1-583 DPCPQLPLVP RGGGTPKAPT VETYPPEEDK EGSDLRPIVI DGSNVAMSHG BACU009683/1-583 DPCPQLPLVP RGGGNPKAPI LEPSPPEEDK EGSDLRPVVI DGSNVAMSHG ENSTTRP00000008144/1-598 DPCPQLPLVP RGGGNPKAPI LEPSPPEEDK EGSDLRPVVI DGSNVAMSHG 151 200 ENSP00000362179/1-599 NKEVFSCRGI LLAVNWFLER GHTDITVFVP SWRKEQPRPD VPITDQHILR bmy_02128T0/1-302 NKEVFSCRGI LLAVNWFLER GHTDITVFVP SWRKEQPRPD VPITDQHILR ENSBTAP00000015041/1-583 NKDVFSCRGI LLAVNWFLER GHTDITVFVP SWRKEQPRPD VPITDQHILR BACU009683/1-583 NKEVFSCRGI LLAVNWFLER GHTDITVFVP SWRKEQPRPD VPITDQHILR ENSTTRP00000008144/1-598 NKEVFSCRGI LLAVNWFLER GHTDITVFVP SWRKEQPRPD VPITDQHILR 201 250 ENSP00000362179/1-599 ELEKKKILVF TPSRRVGGKR VVCYDDRFIV KLAYESDGIV VSNDTYRDLQ bmy_02128T0/1-302 DLEKKKILVF TPSRRVGGKR VVCYDDRFIV KLAFESDGIV VSNDTYRDLQ ENSBTAP00000015041/1-583 DLEKKKILVF TPSRRVGGKR VVCYDDRFIV KLAFESDGIV VSNDTYRDLQ BACU009683/1-583 DLEKKKILVF TPSRRVGGKR VVCYDDRFIV KLAFESDGIV VSNDTYRDLQ ENSTTRP00000008144/1-598 DLEKKKILVF TPSRRVGGKR VVCYDDRFIV KLAFESDGIV VSNDTYRDLQ 251 300 ENSP00000362179/1-599 GERQEWKRFI EERLLMYSFV NDKFMPPDDP LGRHGPSLDN FLRKKPLTLE bmy_02128T0/1-302 GERQEWKRFI EERLLMYSFV NDKYIP---- ---------- ---------- ENSBTAP00000015041/1-583 GERQEWKRFI EERLLMYSFV NDKFMPPDDP LGRHGPSLDN FLRKKPLTSE BACU009683/1-583 GERQEWKRFI EERLLMYSFV NDKFMPPDDP LGRHGPSLDN FLRKKPLMAE ENSTTRP00000008144/1-598 GERQEWKRFI EERLLMYSFV NDKFMPPDDP LGRHGPSLDN FLRKKPLMAE 301 350 ENSP00000362179/1-599 HRKQPCPYGR KCTYGIKCRF FHPERPSCPQ RSVADELRAN ALLSPPRAPS bmy_02128T0/1-302 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015041/1-583 HKKQPCPYGR KCTYGIKCRF LHPERPSRPQ RSVADELRAN ALLPPSRAAS BACU009683/1-583 HRKQPCPYGR KCTYGIKCRF FHPERPSRPQ RSVADELRAN ALLSPPRPPS ENSTTRP00000008144/1-598 HRKQPCPYGR KCTYGIKCRF FHPERPSRPQ RSVADELRAN ALLSPPRPPS 351 400 ENSP00000362179/1-599 KDKNGRRPSP SSQSSSLLTE SEQCSLDGKK LGAQASPGSR QEGLTQTYAP bmy_02128T0/1-302 ---------- ---------- ---------- ---------- --------AT ENSBTAP00000015041/1-583 KDKNSRRPSP SSQPGSLPTE HEQCSPDRKK LGAQASPGTP REGLMQTFAP BACU009683/1-583 KEKSGRRPSP SSQPGSLPTE HEQCSPDGKK LGAQSSPGTH GEGLTQTFTP ENSTTRP00000008144/1-598 KEKSGRRPSP SSQPGSLPTE HEQCSPDGKK LGAQASPGTP REGLTQTFNA 401 450 ENSP00000362179/1-599 SGRSLAPSGG SGSSFGPTDW LPQTLDSLPY VSQDCLDSGI GSLESQMSEL bmy_02128T0/1-302 AGR------- ---------- ---------- ----CLWEGW S--------- ENSBTAP00000015041/1-583 TGRSLPPSGS SGGSFGPSEW FPQTLDSLPY ASQDCLDSGI GSLESQMSEL BACU009683/1-583 AGRSLPPSGG SGSSFGPSDW FPQTLDSLPY TSQDCLDSGI GSLESQMSEL ENSTTRP00000008144/1-598 AGRSLPPSGG SGSSFGPSDW FPQTLDSLPY TSQDCLDSGI GSLESQMSEL 451 500 ENSP00000362179/1-599 WGVRGGGPGE PGPPRAPYTG YSPYGSELPA TAAFSAFGRA MGAGHFSVPA bmy_02128T0/1-302 WGSSAAG--- ----RWPWV- ---------- ---------- ---------- ENSBTAP00000015041/1-583 WGVRGGGPGE PGPPRGPYAG YCTYGAELPA TPAFSAFSRA LGAGHFSVPA BACU009683/1-583 WGIRGGGPAE PGPPRGPYAG YRPYGAELPA TPAFSAFSRT MGAGHFSVPA ENSTTRP00000008144/1-598 WGIRGGGPVE PGPPRGPYAG YRPYGAELPT TPAFSAFGRA VGAGHFSVPA 501 550 ENSP00000362179/1-599 DYPPAPPAFP PREYWSEPYP LPPPTSVLQE PPVQSPGAGR SPWGRAGSLA bmy_02128T0/1-302 ---------- ---------- ---------- -QAAGPTWEG SGWDQTGAF- ENSBTAP00000015041/1-583 DYAPPPAAFP PREYWSEPYQ LPPPTQRLQE PQAPGPGADR GPWGGAGRLA BACU009683/1-583 DYAPRPAAFP PREYWSEPYQ LPPPTPVLQE PRVPGPGADR GPWGGAGSLA ENSTTRP00000008144/1-598 DYAPPPAAFP PREYWSEPYQ LPPTTPVLQE PRVPGPGADR GPWGGAGSLA 551 600 ENSP00000362179/1-599 KEQASVYTKL CGVFPPHLVE AVMGRFPQLL DPQQLAAEIL SYKSQHPSE bmy_02128T0/1-302 ---------- ---------- ---------- ---------- --------- ENSBTAP00000015041/1-583 KERASVYTKL CGVFPPHLVE AVMSRFPQLL DPQQLAAEIL SYKSQHLSE BACU009683/1-583 KERASVYTKL CGVFPPHLVE AVMGRFPQLL DPQQLAAEIL SYKSQHLSE ENSTTRP00000008144/1-598 KERASVYTKL CGVFPPHLVE AVMGRFPQLL DPQQLAAEIL SYKSQHHSE