KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:54:24 2014 Check: 00 .. Name: ENSP00000408697/1-796 Len: 802 Check: 8436 Weight: 1.00 Name: ENSBTAP00000015047/1-798 Len: 802 Check: 8256 Weight: 1.00 Name: bmy_05842T0/1-767 Len: 802 Check: 2292 Weight: 1.00 Name: ENSTTRP00000015070/1-800 Len: 802 Check: 5305 Weight: 1.00 // 1 50 ENSP00000408697/1-796 MAETKDVFGQ EPHPVEDDLY KERTRKRRKS DRDQRFRAFP SMEQSALKEY ENSBTAP00000015047/1-798 MAETEDFLVR ELHPEDDDIF KEPMRKRRRS DRDQRFRAFP SVEQSALKEY bmy_05842T0/1-767 MAETEDFVGQ EPHP------ -EPTKKRRRS DRDQRFRAFP SVEQSALKEY ENSTTRP00000015070/1-800 MPETEDCVGQ EPHPVDDDFF KEPMKKRRRS DRDQRFRAFP SVEQSALREY 51 100 ENSP00000408697/1-796 EKLESRTRRV LSNTYQKLIQ SVFLDDSIPN GVKYLINRLL ALIEKPTVDP ENSBTAP00000015047/1-798 EKLESRTRRV LSNTYQKLIQ SVFLDDNIPN SIKYLINRLL ALIEKPSLDP bmy_05842T0/1-767 EKLESRTRRV LSNTYQKLIQ SVFLDDSIPN GVKYLINRLL ALIEKPSLDP ENSTTRP00000015070/1-800 EKLESRTRRV LSNTYQKLIQ SVFLDDSIPN GVKYLINRLL ALIEKPSLDP 101 150 ENSP00000408697/1-796 IYIALFGSTG AGKSSLINAI IQQAMFLPVS GESICTSCIV QVSSGCCVQY ENSBTAP00000015047/1-798 IYIGLFGSTG AGKSSLINAI IRQAMFLPVS GESICTSCIV QVSSGCCEQY bmy_05842T0/1-767 IYIGLFGSTG AGKSSLINAI IQQAMFLPVS GESICTSCIV QVSSGCCEQY ENSTTRP00000015070/1-800 IYIGLFGSTG AGKSSLINAI IQQAMFLPVS GESICTSCIV QVSSGCCEQY 151 200 ENSP00000408697/1-796 EAKIHLLSDQ EWREELKNLT KLLHRTEELS REEADAWNRD EAVEEATWKL ENSBTAP00000015047/1-798 EAKIHLLSDQ EWKEELKNLT TLLHRTEGPG GEEEDAWDRG DAAEEAVWKL bmy_05842T0/1-767 EAKIHLLSDQ EWKEELKNLT KLLHRPEALG REEEDAWDRA DAVEEAIWKL ENSTTRP00000015070/1-800 EAKIHLLSNQ EWKQELKNLT KLLHRPEQLG REEEDAWDRD DAVEEAIWKL 201 250 ENSP00000408697/1-796 QMIYGNGAES KNYEELLRAK PKRKIPTSRV ITLKAEEAEE LSIKLDPYIR ENSBTAP00000015047/1-798 QMFYGNGAEG KSYEELLRAK PRGKIPTSRV ISLKAEEAGE LSVKLDPYIR bmy_05842T0/1-767 QMFYGNGAAR KNYEELLRAK PKGKIPTSRV ITLKAEEAGE LSLKLDPYIR ENSTTRP00000015070/1-800 QMVYGNGVER KSYEELLRAK PKGKIPTSRV ITLKAEEAGE LSLKLDPYIR 251 300 ENSP00000408697/1-796 TQRRDWDGEA AEMRIWPLIK HVEVTLPKSD LIPEGVVLVD IPGTGDFNSK ENSBTAP00000015047/1-798 TQRRDWDGGS AETHIWPLIK LVEVTLPKSE LIPEGVVLVD IPGTGDFNSK bmy_05842T0/1-767 TQRRGWDEGS AETQIWPLIK LVEVTLPKSE LIPAGVVLVD IPGTGDFNSK ENSTTRP00000015070/1-800 TQRRGWDEGS AETQIWPLIK LVEVTLPKSE LIPEGVVLVD IPGTGDFNSK 301 350 ENSP00000408697/1-796 RDEMWKKTID KCSVIWVISD IERVSGGQAH EDLLNESIKA CQRGFCRDVA ENSBTAP00000015047/1-798 RDEMWKKTID KCSVIWVISD IERISGGRAH EDLLNESMKA CQRGFCRDLA bmy_05842T0/1-767 RDEMWRKTID KCSVIWLISD IERVSGGRAH EDLLNESIKA CQRGFCRDVA ENSTTRP00000015070/1-800 RDEMWRKTID KCSVIWLISD IERVSGGRAH EDLLNESIKA CQRGFCRDMA 351 400 ENSP00000408697/1-796 LVVTKMDKLH LPEYLRERKA GNQAIQSQRE AVLERNEMIK LQRTRILKEK ENSBTAP00000015047/1-798 LVVTKSDKLH LPEYLRERKV GNEAIQSQRE AVLERNEMIK LQRNKILKDK bmy_05842T0/1-767 LVVTKTDKLH LSEYL----- ------SQRE AVLERNEMIK LQRNKVLKEK ENSTTRP00000015070/1-800 LVVTKTDKLH LPEYLRAKRE VWQAIQSQRE AVLERNEMIK LQRNKVLKEK 401 450 ENSP00000408697/1-796 LKRKLPADFK VLEASDLVYT VSAQEYWQQA LLTEEETEIP KLREYIRKSL ENSBTAP00000015047/1-798 LKRKLPADSR VLEASELVYT VSAQEYWQQA VLTEEETEIP KLREYIRRRL bmy_05842T0/1-767 LKRKLPADSR VLEDSELVYT VSAQEYWQQA LLTEEETEIP KLREYIRRRL ENSTTRP00000015070/1-800 LKRKLPADSR VLEDSELVYT VSAQEYWQQA LLTEEETEIP KLREYIRRRL 451 500 ENSP00000408697/1-796 LDKKKRTVTK YVTEAFGLLL LTDSFNSTQN LPNEHLHMSV LRRFAEEKVE ENSBTAP00000015047/1-798 LDKKKRTVTK YVTEAFGLLL LTDSFSCIDH IPNEYLHMSG LRRFVEEKIQ bmy_05842T0/1-767 LDKKRRMATK YVTEAFGLLL LTDSFSCTDN LPNEYLHVSG LRRFVEEEIE ENSTTRP00000015070/1-800 LDKKRRMVTK YVTEAFGLFL LTDSFSCTDN LPNEYLHVSG LRRFVEEKIQ 501 550 ENSP00000408697/1-796 LLEKAIAQCF ACMEQPLQEG VRTARTSYRC ILRACLVRSK GNQGFHQTLK ENSBTAP00000015047/1-798 LLEKAIDQCF AHIARPLQEG IWNARSSYRR ILGACLVRSR GNQGFHQTLK bmy_05842T0/1-767 LLEKAIDQCF AHIVQPLQEG VRSARSSYRR ILGACLV--- -------TLK ENSTTRP00000015070/1-800 LLEKAIDQCF AHIVQPLQEG VRNARSSYRQ ILGACLVRSR GNQGFHQTLK 551 600 ENSP00000408697/1-796 AVCLKNGIYA SRTLARIDLN EALTQPVYDQ IDPVFGSIF- RTGKPT-GSA ENSBTAP00000015047/1-798 AVCLKNGIYA SRTLARIDLN EAITQPIYEQ IDPIFGRIFS RSGKPTDGSA bmy_05842T0/1-767 AVCLKNGIYA SRTLGRIDLN EAITQPIYEQ IDPVFGGIF- RSGKPTDGSA ENSTTRP00000015070/1-800 AVCLKNGIYA SRTLGRIDLN EAITQPIYEQ IDPVFGGIF- RSGKPSDGSA 601 650 ENSP00000408697/1-796 LMPHIDAFKQ SLQEKMTEIG IRSGWKYDSC KKNFLIQEIS AILGGLEDHI ENSBTAP00000015047/1-798 LIPHIDAFKL SLQEKMTEIG IRNGWKYDSY KKTFLIQEIS AILGGLEEHI bmy_05842T0/1-767 LMPHIDAFKH SLQEKMTEIG IRNGWKYDSY KKRFLIQEIS AILGGLEGHI ENSTTRP00000015070/1-800 LMPHIDAFKH SLQEKMTEIG IRNGWKYDSY KKSFLIQEIS AILGGLEGHI 651 700 ENSP00000408697/1-796 LRRKRRIYES LTASVQSDLK LCYEEAAQIT GKKACERMKD AIRRGVDRQV ENSBTAP00000015047/1-798 LRKKRKIYES LTTSVQNDLK PCYEEAAQIT GKKACERMKD VLRRGVDRQV bmy_05842T0/1-767 LRKKRRIYES LSTSVQNDLK PCYEEAAQIT GKKACERMKD VLRRGLDQQV ENSTTRP00000015070/1-800 LRRKRRIYES LSTSVQNDLK PCYEEVAQIT GKKACERMKD VLRRGLDRQV 701 750 ENSP00000408697/1-796 AEGMFERAQE RMQHQFQQLK TGIVEKVKGS ITTMLALASS QGDGLYKELA ENSBTAP00000015047/1-798 AEGMFERAQE RMQHQFQQLK NGITEKVKGS IATMLTLASS PGDGLYKELA bmy_05842T0/1-767 AEGMFERAQE RMQHQFHHLK NGITEKVKGS ITTMVTLASS QGDGLHKELA ENSTTRP00000015070/1-800 DEGMFERAQE RMQHQFHQLK NGITENVKGS VTTMLTLASS -GDGLYKELA 751 800 ENSP00000408697/1-796 DVGSEYKEME KLHRSLREVA ENARLRKGMQ EFLLRASPSK AGPPGTSL-- ENSBTAP00000015047/1-798 DVKSEYKEME KLHRSLREVA ENAVLRRGMQ NFLLRMSPSK AGPPKTSL-- bmy_05842T0/1-767 DVKSEYKELE KLHRSLREVA ENALLRRGMQ DFLLRMSPSK SGPPKT---- ENSTTRP00000015070/1-800 HVKSEYKEME KLHRSLREVA ENALLRRGMQ DFLLRMSPSK SGPPKTWIYL 801 850 ENSP00000408697/1-796 -- ENSBTAP00000015047/1-798 -- bmy_05842T0/1-767 -- ENSTTRP00000015070/1-800 VI