KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:25 2014 Check: 00 .. Name: ENSP00000369677/1-1016 Len: 1018 Check: 4825 Weight: 1.00 Name: ENSTTRP00000004869/1-994 Len: 1018 Check: 960 Weight: 1.00 Name: ENSBTAP00000015049/1-1015 Len: 1018 Check: 5003 Weight: 1.00 Name: bmy_01070T0/1-1000 Len: 1018 Check: 7038 Weight: 1.00 Name: BACU014543/1-1018 Len: 1018 Check: 1858 Weight: 1.00 // 1 50 ENSP00000369677/1-1016 MAPRTLWSCY LCCLLTAAAG AASYPPRGFS LYTGSSGALS PGGPQAQIAP ENSTTRP00000004869/1-994 MAPGTLWSCY LCCLLTTAVG AASYPPRGYS LYTGSGGALS PGGPQAQSAP ENSBTAP00000015049/1-1015 MAPGTLWSCY LCCLLATAVG AASYPPRGYS LYTGSGGALS SGGTQAQSAP bmy_01070T0/1-1000 ---------- --------VG AASYPPRGYS LYTGSGGALS PGGPQAQSAP BACU014543/1-1018 MAPGALWSCY LCCLLTAAVG AASYPPRGYS LYTGSGGGPS PGGPQAQSAP 51 100 ENSP00000369677/1-1016 RPASRHRNWC AYVVTRTVSC VLEDGVETYV K--YQPCAWG QPQCPQSIMY ENSTTRP00000004869/1-994 RPASRHRNWC AYVVTRTVSC VLEDGVETFI KPDYQPCGWG QPQCSHSIMY ENSBTAP00000015049/1-1015 RPASRHRNWC AYVVTRTVSC VLEDGVETFI KPDYQPCGWG QPQCSRSIMY bmy_01070T0/1-1000 RPASRHRNWC AYVVTRTVSC VLEDGVETFI KPDYQPCGWG QPQCSHSIMY BACU014543/1-1018 RPASRHRNWC AYVVTRTVSC VLEDGVETFI KPDYQPCGWG QPQCSHSIMY 101 150 ENSP00000369677/1-1016 RRFLRPRYRV AYKTVTDMEW RCCQGYGGDD CAESPAPALG PASSTPRPLA ENSTTRP00000004869/1-994 RSFLRPRYRV AYKTVTDMEW RCCQGYGGDD CAEGPAPALG PAPTTPRPRP ENSBTAP00000015049/1-1015 RSFLRPRYRV AYKTVTDMEW RCCQGYGGDD CAEGPAPALG PAPTTPRPRP bmy_01070T0/1-1000 RSFLRPRYRV AYKTVTDMEW RCCQGYGGDD CAEGPAPALG PAPTTPRPRP BACU014543/1-1018 RSFLRPRYRV AYKTVTDMEW RCCQGYGGDD CAEGPAPALG PAPATPRPRP 151 200 ENSP00000369677/1-1016 QPARPNLSGS SAGSPLSGLG GEGPGESEKV QQLEEQVQSL TKELQGLRGV ENSTTRP00000004869/1-994 RPARPNLSGS SAGNHLSGLG GEGPGESQKV QQLEEQVQSL TKELQGLRGV ENSBTAP00000015049/1-1015 QPARPNLSGS SAGSHLSGLG GEGPGESEKV QQLEEQVQSL TKELQGLRGV bmy_01070T0/1-1000 RPARPNLSGS SAGSHLSGLG GEGPGESQKV QQLEEQVQSL TKELQGLRGV BACU014543/1-1018 RPARPNLSGS SAGSHLSGLG GEGPGESQKV QQLEEQVQSL TKELQGLRGV 201 250 ENSP00000369677/1-1016 LQGLSGRLAE DVQRAVETAF NGRQQPADAA ARPGVHETLN EIQHQLQLLD ENSTTRP00000004869/1-994 LQGLSGRLTE DVQRAVEIAF NGRQQPADAA ARPGVHETLS EIQQQLQLLD ENSBTAP00000015049/1-1015 LQGLSGRLTE DVQRAVETAF NGRQQPADAA ARPGVHETLN EIQQQLQLLD bmy_01070T0/1-1000 LQGLSGRLTE DVQRAVETAF NGRQQPADAA ARPGVHETLN EIQQQLQLLD BACU014543/1-1018 LQGLSGRLTE DVQRAVETAF NGRQQPADAA ARPGVHETLN EIQQQLQLLD 251 300 ENSP00000369677/1-1016 TRVSTHDQEL GHLNNHHGGS SSSGGSRAPA PASAPPGPSE ELLRQLEQRL ENSTTRP00000004869/1-994 NRVSTHDQEL GHLNTHHSGG GGSGGSRALG PSPAPPGHSE ELLRELEQRL ENSBTAP00000015049/1-1015 NRVSTHDQEL GHLNNHHSGG ---GSSRAPD PTPAPPGRSE ELLRELEQRL bmy_01070T0/1-1000 NRVSTHDQEL GHLNTHHSGG GGSGGSRALG PSPAPPGRSE ELLRELEQRL BACU014543/1-1018 NRVSTHDEEL GHLNTHHSGG GGSGGSRALG PSPAPPGHSE ELLRELEQRL 301 350 ENSP00000369677/1-1016 QESCSVCLAG LDGFRRQQQE DRERLRAMEK LLASVEERQR HLAGLAVGRR ENSTTRP00000004869/1-994 QESCSVCLAG LDGFRRQQQE DRERLRALEK LLASVEERQR QLAGQALGRW ENSBTAP00000015049/1-1015 QESCSVCLAG LDGFRRQQQQ DRERLRALEK LLASVEERQR HLTGQALGRW bmy_01070T0/1-1000 QESCSVCLAG LDGFRRQQQE DRERLRALEK LLASVEERQR QLAGQALGRW BACU014543/1-1018 QESCSVCLAG LDGFRRQQQE DRERLRALEK LLASVEERQR QLAGQALGRW 351 400 ENSP00000369677/1-1016 PPQECCSPEL GRRLAELERR LDVVAGSVTV LSGRRGTELG GAAGQGGHPP ENSTTRP00000004869/1-994 PPPECCPPEL GRRLAELERR LDVVAGSVTV LXXXXXXXXX XXXXXXXXXX ENSBTAP00000015049/1-1015 APQECCPPEL GRRLAELERR LDVVAGSVTV LSGRRGTHLG GASGQGGHPP bmy_01070T0/1-1000 PPQECCPPEL GRRLAELERR LDVVAGSVTV LSGRRGANLG VAAGQGGHPP BACU014543/1-1018 PPQECCPPEL GRRLAELERR LDVVAGSVTV LSGRRGANLG VAAGQGGHPP 401 450 ENSP00000369677/1-1016 GYTSLASRLS RLEDRFNSTL GPSEEQEESW PGAPGGLSHW LPAARGRLEQ ENSTTRP00000004869/1-994 XXXXXXXXXX XXXXXXXXXX XXXXXXEEGW RGLPGGLGHW LPAARGQQER ENSBTAP00000015049/1-1015 GYTSLASRLS RLEDRFNSTL GPSEEQEEGW PGRPGGLGHW LPAARGKLEK bmy_01070T0/1-1000 GYTSLASRLS RLEDRFNSTL GPLEEQEEGW RGHPGGLGHW LPAARGQQEK BACU014543/1-1018 GYTSLVSRLS RLEDRFNSTL GPLEEQEEGW RGHPGGLGHW LPAARGQQEK 451 500 ENSP00000369677/1-1016 LGGLLANVSG ELGGRLDLLE EQVAGAMQAC GQLCSGAPGE QDSQVSEILS ENSTTRP00000004869/1-994 LEGLLANVSG ELGGRLALLE EQVAGAVQAC GQLCSGAPGE QGSEVSEILS ENSBTAP00000015049/1-1015 LEGRLTNVSG ELGGRLNQLE EQVAGAVQAC GQLCSGAPGE QDSQVREILS bmy_01070T0/1-1000 LEGLLANVSG ELGGRLALLE EQVAGAVQAC GQLCSGAPGE QGSQVSEILS BACU014543/1-1018 LEGLLANVSG ELGGRLALLE EQVAGAVQAC GQLCSGAPGE QGSQVSEILS 501 550 ENSP00000369677/1-1016 ALERRVLDSE GQLRLVGSGL HTVEAAGEAR QATLEGLQEV VGRLQDRVDA ENSTTRP00000004869/1-994 ALERRVLDSE GQLQLVGSGL HKLGAAGESQ QATLEGLQGV AGQLQGRVNA ENSBTAP00000015049/1-1015 ALERRVLDSE GQLRLVGSDL HKLGAAGEAQ QAALEQLQGA VGLLHGRVDA bmy_01070T0/1-1000 ALERRVLDSE GQLQLVGSGL HKLGAAGEAQ QAALEGLQGV VGQLQGRVDA BACU014543/1-1018 ALERRVLDSE GQLQLVGSGL HKLGAAGETQ QAALEGLQGV VGQLQGRVDA 551 600 ENSP00000369677/1-1016 QDETAAEFTL RLNLTAARLG QLEGLLQAHG DEGCGACGGV QEELGRLRDG ENSTTRP00000004869/1-994 LDETAAEFAL QLNLTAVRLG QLEGLLQARG DEGCGACGGV QEELGRLRDG ENSBTAP00000015049/1-1015 LGETAAEFAL QLNLTAARLG QLEGLLQARG EEGCGACGGV QEELGRLRDG bmy_01070T0/1-1000 LDETAAEFTL QLNLTAARLG QLEGLLQARG DEGCGTCGGV QEELGRLRDG BACU014543/1-1018 LDETAAEFTL QLNLTAARLG QLEGLLQARG DEGCGTCGGV QEELGRLRDG 601 650 ENSP00000369677/1-1016 VERCSCPLLP PRGPGAGPGV GGPSRGPLDG FSVFGGSSGS ALQALQGELS ENSTTRP00000004869/1-994 VERCSCPLLP ARGPGAGPGV GGPSRGPLDG FSVFGGSSGS ALQALQGELS ENSBTAP00000015049/1-1015 VERCSCPLLP PRGPGAGPGV GGPSRGPLDG FSVFGGSSGS ALQALQGELS bmy_01070T0/1-1000 VERCSCPLLP PRGPGAGPSV GGPSRGPLDG FSVFGGSSGS ALQALQGELS BACU014543/1-1018 VERCSCPLLP PRGPGAGPGV GGPSRGPLDG FSVFGGSSGS ALQALQGELS 651 700 ENSP00000369677/1-1016 EVILSFSSLN DSLNELQTTV EGQGADLADL GATKDRIISE INRLQQEATE ENSTTRP00000004869/1-994 EVILTFSSLN DSLHELQTTV EGQGADLADL GATKDRIISE INRLQQEATE ENSBTAP00000015049/1-1015 EVILTFSSLN DSLHELQTTV EGQGADLADL GATKDRIISE INRLQQEATE bmy_01070T0/1-1000 EVILTFSSLN DSLHELQTTV EGQGADLADL GATKDRIISE INRLQQEATE BACU014543/1-1018 EVILTFSSLN DSLHELQTTV EGQGADLADL GATKDRIISE INRLQQEATE 701 750 ENSP00000369677/1-1016 HATESEERFR GLEEGQAQAG QCPSLEGRLG RLEGVCERLD TVAGGLQGLR ENSTTRP00000004869/1-994 HATESEERFR GLEEGQAQAG QCPSLEGRLG RLEGVCERLD TVAGGLQGLR ENSBTAP00000015049/1-1015 HATESEERFR GLEEGQAQAG QCPSLEGRLG RLEGVCERLD TVAGGLQGLR bmy_01070T0/1-1000 HATESEERFR GLEEGQAQAG QCPSLEGRLG RLEGVCERLD TVAGGLQGLR BACU014543/1-1018 HATESEERFR GLEEGQAQAG QCPSLEGRLG RLEGVCERLD TVAGGLQGLR 751 800 ENSP00000369677/1-1016 EGLSRHVAGL WAGLRETNTT SQMQAALLEK LVGGQAGLGR RLGALNSSLQ ENSTTRP00000004869/1-994 EGLSRHVAGL WAGLRETNST SQTQAALLEK LLGGQAGLGR RLSALNSSLL ENSBTAP00000015049/1-1015 EGLSRHVAGL WAGLRETNST SQTQAALLEK LLEGQAGLGK RLGALNSSLL bmy_01070T0/1-1000 EGLSRHVAGL WAGLRETNST SQTQAALLEK LLGGQAGLGR RLGALNSSLL BACU014543/1-1018 EGLSRHVAGL WAGLRETNST SQTQAALLEK LLGGQAGLGR RLGALNSSLL 801 850 ENSP00000369677/1-1016 LLEDRLHQLS LKDLTGPAGE AGPPGPPGLQ GPPGPAGPPG SPGKDGQEGP ENSTTRP00000004869/1-994 LLEDRLHQLS LKDLTGPAGE AGPPGPPGVE GPPGPAGPPG PPGKDGQKGP ENSBTAP00000015049/1-1015 LLEDQLHQFS LKDLTGPAGE AGPPGPPGMQ GPPGPAGPPG PPGKDGQKGP bmy_01070T0/1-1000 LLEDRLHQLS LKDLTGPAGE AGPPGPPGVQ GPPGPAGPPG PPGKDGQKGP BACU014543/1-1018 LLEDRLHQLS LKDLTGPAGE AGPPGPPGVQ GPPGPAGPPG PPGKDGQKGP 851 900 ENSP00000369677/1-1016 IGPPGPQGEQ GVEGAPAAPV PQVAFSAALS LPRSEPGTVP FDRVLLNDGG ENSTTRP00000004869/1-994 IGPPGPQGEQ GAEGAPAASV PRVAFSAALS LPRSEPGTVP FDRVLLNDGG ENSBTAP00000015049/1-1015 MGPPGPQGEQ GPEGAPAASV PRVAFSAALS LPRSEPGTVP FDRVLLNDGG bmy_01070T0/1-1000 IGPPGPQGEQ GAEGAPAASV PRVAFSAALS LPRSEPGTVP FDRVLLNDGG BACU014543/1-1018 IGPPGPQGEQ GAEGAPAASV PRVAFSAALS LPRSEPGTVP FDRVLLNDGG 901 950 ENSP00000369677/1-1016 YYDPETGVFT APLAGRYLLS AVLTGHRHEK VEAVLSRSNQ GVARVDSGGY ENSTTRP00000004869/1-994 YYDPETGVFT APIAGRYLLS AVLTGHRHEK VEAVLSRSNL GVARIDSGGY ENSBTAP00000015049/1-1015 YYDPETGVFT APLAGRYLLS AVLTGHRHEK VEAVLSRSNL GVARIDSGGY bmy_01070T0/1-1000 YYDPETGVFT APLAGRYLLS AVLTGHRHEK VEAVLSRSNL GVARIDSGGY BACU014543/1-1018 YYDPETGVFT APLAGRYLLS AVLTGHRHEK VEAVLSRSNL GVARIDSGGY 951 1000 ENSP00000369677/1-1016 EPEGLENKPV AESQPSPGTL GVFSLILPLQ AGDTVCVDLV MGQLAHSEEP ENSTTRP00000004869/1-994 EPEGLENKPV AESQPSPGA- SVFSLILPL- TGDTVCIDLF MGQLAH---- ENSBTAP00000015049/1-1015 EPEGLENKPV AESQPSPGAL GVFSLILPLQ VGDTVCIDLV MGQLAHSEEP bmy_01070T0/1-1000 EPEGLENKPV AESQPSPGAL GVFSLILPLQ AGDTVCIDLV MGQLAHSEEP BACU014543/1-1018 EPEGLENKPV AESQPSPGAL GVFSLILPLQ AGDTVCIDLV MGQLAHSEEP 1001 1050 ENSP00000369677/1-1016 LTIFSGALLY GDPELEHA ENSTTRP00000004869/1-994 ---------- -------- ENSBTAP00000015049/1-1015 LTIFSGALLY GDLELEQA bmy_01070T0/1-1000 LTIFSGALLY GDLELEQA BACU014543/1-1018 LTIFSGALLY GDLELEQA