KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:26 2014 Check: 00 .. Name: BACU002687/1-771 Len: 1210 Check: 9901 Weight: 1.00 Name: ENSP00000358571/1-1210 Len: 1210 Check: 4780 Weight: 1.00 Name: bmy_17298T0/1-860 Len: 1210 Check: 8954 Weight: 1.00 Name: ENSTTRP00000000292/1-1109 Len: 1210 Check: 9498 Weight: 1.00 Name: ENSBTAP00000015051/1-1210 Len: 1210 Check: 4372 Weight: 1.00 // 1 50 BACU002687/1-771 ---------- ---------- ---------- ---------- ---------- ENSP00000358571/1-1210 MASQLQVFSP PSVSSSAFCS AKKLKIEPSG WDVSGQSSND KYYTHSKTLP bmy_17298T0/1-860 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000292/1-1109 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015051/1-1210 MASQLQVFSP PSVSSSAFCS AKKLKIEPSG WDVSGQSSND KYYTHSKTLP 51 100 BACU002687/1-771 ---------- ---------- ---------- ---------- ---------- ENSP00000358571/1-1210 ATQGQANSSH QVANFNIPAY DQGLLLPAPA VEHIVVTAAD SSGSAATSTF bmy_17298T0/1-860 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000292/1-1109 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015051/1-1210 ATQGQANSSH QVANFNIPAY DQGLLLPAPA VEHIVVTAAD SSASAATSTF 101 150 BACU002687/1-771 ---------- ---------- ---------- ---------- ---------- ENSP00000358571/1-1210 QSSQTLTHRS NVSLLEPYQK CGLKRKSEEV DSNGSVQIIE EHPPLMLQNR bmy_17298T0/1-860 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000292/1-1109 -SSQTLTHRS NVSLLEPYQK CGLKRKSEEV DSNGSVQIIE EHPPLMLQNR ENSBTAP00000015051/1-1210 QSSQTLTHRS NVSLLEPYQK CGLKRKSEEV DSNGSVQIIE EHPPLMLQNR 151 200 BACU002687/1-771 ---------- ---------- ---------- ---------- ---------- ENSP00000358571/1-1210 TVVGAAATTT TVTTKSSSSS GEGDYQLVQH EILCSMTNSY EVLEFLGRGT bmy_17298T0/1-860 ---------- ---------- ---------- -MLKSMSST- ---------- ENSTTRP00000000292/1-1109 TVVGAAATTT TVTTKSSSSS GEGDYQLVQH EILCSMTNSY EVLEFLGRGT ENSBTAP00000015051/1-1210 TVVGAAATTT TVTTKSSSSS GEGDYQLVQH EILCSMTNSY EVLEFLGRGT 201 250 BACU002687/1-771 ---------- ---------- ---------- ---------- ---------- ENSP00000358571/1-1210 FGQVAKCWKR STKEIVAIKI LKNHPSYARQ GQIEVSILSR LSSENADEYN bmy_17298T0/1-860 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000292/1-1109 FGQVAKCWKR STKEIVAIKI LKNHPSYARQ GQIEVSILSR LSSENADEYN ENSBTAP00000015051/1-1210 FGQVAKCWKR STKEIVAIKI LKNHPSYARQ GQIEVSILSR LSSENADEYN 251 300 BACU002687/1-771 ---------- ---------- ---------- ---------- ---------- ENSP00000358571/1-1210 FVRSYECFQH KNHTCLVFEM LEQNLYDFLK QNKFSPLPLK YIRPILQQVA bmy_17298T0/1-860 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000292/1-1109 FVRSYECFQH KNHTCLVFEM LEQNLYDFLK QNKFSPLPLK YIRPILQQVA ENSBTAP00000015051/1-1210 FVRSYECFQH KNHTCLVFEM LEQNLYDFLK QNKFSPLPLK YIRPILQQVA 301 350 BACU002687/1-771 ---------- ---------- ---------- ---------- --------MA ENSP00000358571/1-1210 TALMKLKSLG LIHADLKPEN IMLVDPVRQP YRVKVIDFGS ASHVSKAVCS bmy_17298T0/1-860 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000292/1-1109 TALMKLKSLG LIHADLKPEN IMLVDPVRQP YRVKVIDFGS ASHVSKAVCS ENSBTAP00000015051/1-1210 TALMKLKSLG LIHADLKPEN IMLVDPVRQP YRVKVIDFGS ASHVSKAVCS 351 400 BACU002687/1-771 TFLK----KA PEIILGLPFC EAIDMWSLGC VIAELFLGWP LYPGASEYDQ ENSP00000358571/1-1210 TYLQSRYYRA PEIILGLPFC EAIDMWSLGC VIAELFLGWP LYPGASEYDQ bmy_17298T0/1-860 --------RA PEIILGLPFC EAIDMWSLGC VIAELFLGWP LYPGASEYDQ ENSTTRP00000000292/1-1109 TYLQSRYYRA PEIILGLPFC EAIDMWSLGC VIAELFLGWP LYPGASEYDQ ENSBTAP00000015051/1-1210 TYLQSRYYRA PEIILGLPFC EAIDMWSLGC VIAELFLGWP LYPGASEYDQ 401 450 BACU002687/1-771 ---------- ---------- ---------- ---------- TPEEHELETG ENSP00000358571/1-1210 IRYISQTQGL PAEYLLSAGT KTTRFFNRDP NLGYPLWRLK TPEEHELETG bmy_17298T0/1-860 IRYISQTQGL PAEYLLSAGT KTTRFFNRDP NLGYPLWRLK TPEEHELETG ENSTTRP00000000292/1-1109 IRYISQTQGL PAEYLLSAGT KTTRFFNRDP NLGYPLWRLK TPEEHELETG ENSBTAP00000015051/1-1210 IRYISQTQGL PAEYLLSAGT KTTRFFNRDP NLGYPLWRLK TPEEHELETG 451 500 BACU002687/1-771 IKSKEARKYI FNCLDDMAQV NMSTDLEGTD MLAEKADRRE YIDLLKKMLT ENSP00000358571/1-1210 IKSKEARKYI FNCLDDMAQV NMSTDLEGTD MLAEKADRRE YIDLLKKMLT bmy_17298T0/1-860 IKSKEARKYI FNCLDDMAQV NMSTDLEGTD MLAEKADRRE YIDLLKKMLT ENSTTRP00000000292/1-1109 IKSKEARKYI FNCLDDMAQV NMSTDLEGTD MLAEKADRRE YIDLLKKMLT ENSBTAP00000015051/1-1210 IKSKEARKYI FNCLDDMAQV NMSTDLEGTD MLAEKADRRE YIDLLKKMLT 501 550 BACU002687/1-771 IDADKRITPL KTLNHQFVTM THLLDFPHSN HVKSCFQNME ICKRRVHMYD ENSP00000358571/1-1210 IDADKRITPL KTLNHQFVTM THLLDFPHSN HVKSCFQNME ICKRRVHMYD bmy_17298T0/1-860 IDADKRITPL KTLNHQFVTM THLLDFPHSN HVKSCFQNME ICKRRVHMYD ENSTTRP00000000292/1-1109 IDADKRITPL KTLNHQFVTM THLLDFPHSN HVKSCFQNME ICKRRVHMYD ENSBTAP00000015051/1-1210 IDADKRITPL KTLNHQFVTM THLLDFPHSN HVKSCFQNME ICKRRVHMYD 551 600 BACU002687/1-771 TVSQIKSPFT THVAPNTSTN LTMSFSNQLN TVHNQASVLA SSSTAAAATL ENSP00000358571/1-1210 TVSQIKSPFT THVAPNTSTN LTMSFSNQLN TVHNQASVLA SSSTAAAATL bmy_17298T0/1-860 TVSQIKSPFT THVAPNTSTN LTMSFSNQLN TVHNQASVLA SSSTAAAATL ENSTTRP00000000292/1-1109 TVNQIKSPFT THVAPNTSTN LTMSFSNQLN TVHNQASVLA SSSTAAAATL ENSBTAP00000015051/1-1210 TVSQIKSPFT THVAPNTSTN LTMSFSNQLN TVHNQASVLA SSSTAAAATL 601 650 BACU002687/1-771 SLANSDVSLL NYQSALYPSS AAPVPGVAQQ GVSLQPGTTQ ICTQTDPFQQ ENSP00000358571/1-1210 SLANSDVSLL NYQSALYPSS AAPVPGVAQQ GVSLQPGTTQ ICTQTDPFQQ bmy_17298T0/1-860 SLANSDVSLL NYQSALYPSS AAPVPGVAQQ GVSLQPGTTQ ICTQTDPFQQ ENSTTRP00000000292/1-1109 SLANSDVSLL NYQSALYPSS AAPVPGVAQQ GVSLQPGTTQ ICTQTDPFQQ ENSBTAP00000015051/1-1210 SLANSDVSLL NYQSALYPSS AAPVPGVAQQ GVSLQPGTTQ ICTQTDPFQQ 651 700 BACU002687/1-771 TFIVCPPAFQ TGLQATTKHS GFPVRMDNAV PIVPQAPAAQ PLQIQSGVLT ENSP00000358571/1-1210 TFIVCPPAFQ TGLQATTKHS GFPVRMDNAV PIVPQAPAAQ PLQIQSGVLT bmy_17298T0/1-860 TFIVCPPAFQ TGLQATTKHS GFPVRMDNAV PIVPQAPAAQ PLQIQSGVLT ENSTTRP00000000292/1-1109 TFIVCPPAFQ TGLQATTKHS GFPVRMDNAV PIVPQAPAAQ PLQIQSGVLT ENSBTAP00000015051/1-1210 TFIVCPPAFQ TGLQATTKHS GFPVRMDNAV PIVPQAPAAQ PLQIQSGVLT 701 750 BACU002687/1-771 QGSCTPLMVA TLHPQVATIT PQYAVPFTLS CAAGRPALVE QTAAVLQAWP ENSP00000358571/1-1210 QGSCTPLMVA TLHPQVATIT PQYAVPFTLS CAAGRPALVE QTAAVLQAWP bmy_17298T0/1-860 QGSCTPLMVA TLHPQVATIT PQYAVPFTLS CAAGRPALVE QTAAVLQAWP ENSTTRP00000000292/1-1109 QGSCTPLMVA TLHPQVATIT PQYAVPFTLS CAAGRPALVE QTAAVLQAWP ENSBTAP00000015051/1-1210 QGSCTPLMVA TLHPQVATIT PQYAVPFTLS CAAGRPALVE QTAAVLQAWP 751 800 BACU002687/1-771 GGTQQILLPS TWQQLPGVAL HNSVQPTAVI PEAMGSGQQL TDWRQV---- ENSP00000358571/1-1210 GGTQQILLPS TWQQLPGVAL HNSVQPTAMI PEAMGSGQQL ADWRNAHSHG bmy_17298T0/1-860 GGTQQILLPS TWQQLPGVAL HNSVQPTAVI PEAMGSGQQL TDWRNAHSHG ENSTTRP00000000292/1-1109 GGTQQILLPS TWQQLPGVAL HNSVQPTAVI PEAMGSGQQL TDWRNAHSHG ENSBTAP00000015051/1-1210 GGTQQILLPS TWQQLPGVAL HNSVQPTAVI PEAMGSGQQL TDWRNAHSHG 801 850 BACU002687/1-771 ---------- ---------- ---PYPLGKE H--------- ---------- ENSP00000358571/1-1210 NQYSTIMQQP SLLTNHVTLA TAQPLNVGVA HVVRQQQSSS LPSKKNKQSA bmy_17298T0/1-860 NQYSTIMQQP SLLTNHVTLA TAQPLNVGVA HVVRQQQSSS LPSKKNKQSA ENSTTRP00000000292/1-1109 NQYSTIMQQP SLLTNHVTLA TAQPLNVGVA HVVRQQQSSS LPSKKNKQSA ENSBTAP00000015051/1-1210 NQYSTIMQQP SLLTNHVTLA TAQPLNVGVA HVVRQQQSSS LPSKKNKQSA 851 900 BACU002687/1-771 -LRIWSSLDV LPSQVYSLVG SSPLRTTSSY NSLVPVQDQH QPIIIPDTPS ENSP00000358571/1-1210 PVSSKSSLDV LPSQVYSLVG SSPLRTTSSY NSLVPVQDQH QPIIIPDTPS bmy_17298T0/1-860 PVSSKCSLDV LPSQVYSLVG SSPLRTTSSY NSLVPVQDQH QPIIIPDTPS ENSTTRP00000000292/1-1109 PVSSKSSLDV LPSQVYSLVG SSPLRTTSSY NSLVPVQDQH QPIIIPDTPS ENSBTAP00000015051/1-1210 PVSSKSSLDV LPSQVYSLVG SSPLRTTSSY NSLVPVQDQH QPIIIPDTPS 901 950 BACU002687/1-771 PPVSVITIRS DTDEEEDNKY KPNSSGLKAR SNVISYVTVN DSPDSDSSLS ENSP00000358571/1-1210 PPVSVITIRS DTDEEEDNKY KPSSSGLKPR SNVISYVTVN DSPDSDSSLS bmy_17298T0/1-860 PPVSVITIRS DTDEEEDNKY KPNSSGLKAR SNVISYVTVN DSPDSDSSLS ENSTTRP00000000292/1-1109 PPVSVITIRS DTDEEEDNKY KPNSSGLKAR SNVISYVTVN DSPDSDSSLS ENSBTAP00000015051/1-1210 PAVSVITIRS DTDEEEDNKY KPNSSGLKAR SNVISYVTVN DSPDSDSSLS 951 1000 BACU002687/1-771 SPYSTDTLSA LRGNSGPLPE GPGRVVGDGT GTRTIIVPPL KTQLGDCTVA ENSP00000358571/1-1210 SPYSTDTLSA LRGNSGSVLE GPGRVVADGT GTRTIIVPPL KTQLGDCTVA bmy_17298T0/1-860 SPYSTDTLSA LRGNSGPLPE GPGRVVGDGT GTRTIIVPPL KTQLGDCTVA ENSTTRP00000000292/1-1109 SPYSTDTLSA LRGNSGPLPE GPGRVVGDGA GTRTIIVPPL KTQLGDCTVA ENSBTAP00000015051/1-1210 SPYSTETLSA LRGNSGSLPE GPGRVVGDGP GTRTIIVPPL KTQLGDCTVA 1001 1050 BACU002687/1-771 TQASGLLSSK SKPVASVSGQ SSGCCATPTG YRAQRGGASA AQPLNLSQNQ ENSP00000358571/1-1210 TQASGLLSNK TKPVASVSGQ SSGCCITPTG YRAQRGGTSA AQPLNLSQNQ bmy_17298T0/1-860 TQASGLLSSK SKPVASVSGQ SSGCCATPTG YRAQRGGTSA AQPLNLSQNQ ENSTTRP00000000292/1-1109 TQASGLLSSK TKPVASVSGQ SSGCCITPTG YRAQRGGTSA AQPLNLSQNQ ENSBTAP00000015051/1-1210 TQASGLLSSK TKPVASVSGQ SSGCCITPTG YRAQRGGTSA AQPLNLSQNQ 1051 1100 BACU002687/1-771 QSSSAPTSQE RSSNPAPRRQ QAFVAPLSQA SYAFQHGSPL HSTGHPHLAP ENSP00000358571/1-1210 QSSAAPTSQE RSSNPAPRRQ QAFVAPLSQA PYTFQHGSPL HSTGHPHLAP bmy_17298T0/1-860 QSSSAPTSQE RSSNPAPRRQ QAFVAPLSQA PYAFQHGSPL HSTGHPHLAP ENSTTRP00000000292/1-1109 QSSSAPTSQE RSSNPAPRRQ QAFVAPLSQA PYAFQHGSPL HSTGHPHLAP ENSBTAP00000015051/1-1210 QSSSAPTSQE RSSNPAPRRQ QAFVAPLSQA PYAFQHGSPL HSTGHPHLAP 1101 1150 BACU002687/1-771 APAHLPSQPH LYTYAAPTSA AALGSTSSIA HLFSPQGSSR HAAAYTTHPS ENSP00000358571/1-1210 APAHLPSQAH LYTYAAPTSA AALGSTSSIA HLFSPQGSSR HAAAYTTHPS bmy_17298T0/1-860 APAHLPSQPH LYTYAAPTSA AALGSTSSIA HLFSPQGSSR HAAAYTTHPS ENSTTRP00000000292/1-1109 APAHLPSQPH LYTYAAPTSA AALGSTSSIA HLFSPQGSSR HAAAYTTHPS ENSBTAP00000015051/1-1210 APAHLPSQPH LYTYAAPTSA AALGPTTSIA HLFSPQGSSR HAAAYATHPS 1151 1200 BACU002687/1-771 TLVHQVPVSV GPSLLTSASV APAQYQHQFA TQSYIGSSRG STIYTGYPLS ENSP00000358571/1-1210 TLVHQVPVSV GPSLLTSASV APAQYQHQFA TQSYIGSSRG STIYTGYPLS bmy_17298T0/1-860 TLVHQVPVSV GPSLLTSASV APAQYQHQFA TQSYIGSSRG STIYTGYPLS ENSTTRP00000000292/1-1109 TLVHQVPVSV GPSLLTSASV APAQYQHQFA TQSYIGSSRG STIYTGYPLS ENSBTAP00000015051/1-1210 TLVHQVPVSV GPSLLTSASV APAQYQHQFA TQSYIGSSRG STIYTGYPLS 1201 1250 BACU002687/1-771 PTKISQYSYL ENSP00000358571/1-1210 PTKISQYSYL bmy_17298T0/1-860 PTKISQYSYL ENSTTRP00000000292/1-1109 PTKISQYSYL ENSBTAP00000015051/1-1210 PTKISQYSYL