KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:27 2014 Check: 00 .. Name: ENSP00000260599/1-298 Len: 412 Check: 9722 Weight: 1.00 Name: ENSBTAP00000015052/1-342 Len: 412 Check: 5400 Weight: 1.00 Name: ENSTTRP00000004890/1-297 Len: 412 Check: 6788 Weight: 1.00 Name: bmy_01071T0/1-394 Len: 412 Check: 7210 Weight: 1.00 Name: BACU014544/1-349 Len: 412 Check: 8421 Weight: 1.00 // 1 50 ENSP00000260599/1-298 MEEKQILCVG LVVLDVISLV DKYPKEDSEI RCLSQRWQRG GNASNSCTVL ENSBTAP00000015052/1-342 MEEKQILCVG LVVLDIINVM DKYPEEDTDS RCLSQRWQRG GNASNSCTVL ENSTTRP00000004890/1-297 MEEKQILCVG LVVLDIISVM DKYPEEDTDS RCLSQRWQRG GNASNSCTVL bmy_01071T0/1-394 MEEKQILCVG LVALDIISVM DKYPEEDTDS RCLSQRWQRG GNASNSCTVL BACU014544/1-349 MEEKQILCVG LVALDIISVM DKYPEEDTDS RCLSQRWQRG GNASNSCTVL 51 100 ENSP00000260599/1-298 SLLGAPCAFM GSMAPGHVAD ---------- ---------- ---------- ENSBTAP00000015052/1-342 SLLGAPCAFM GSLARGHVAD ---------- ---------- ---------- ENSTTRP00000004890/1-297 SLLGAPCAFM GSLAPGHAAD ---------- ---------- ---------- bmy_01071T0/1-394 SLLGAPCAFM GSLAPGHVAE VFLTKLQPCS PASPASTQPV TVTPRPIVAP BACU014544/1-349 SLLGAPCAFM GSLAPGHVAD ---------- ---------- ---------- 101 150 ENSP00000260599/1-298 ---------- ---------- ---------- ---FVLDDLR RYSVDLRYTV ENSBTAP00000015052/1-342 ---------- ---------- ---------- ---FVLDDLR RYSVDLRYMV ENSTTRP00000004890/1-297 ---------- ---------- ---------- ---------- ---------- bmy_01071T0/1-394 LLAPQGPRWP CHLPSSPQTP VELRLPGLLR PGSFVLDDLR RYSVDLRYTV BACU014544/1-349 ---------- ---------- ---------- ---FVLDDLR RYSVDLRYTV 151 200 ENSP00000260599/1-298 FQTTGSVPIA TV-------- ---------- ---------- ---------- ENSBTAP00000015052/1-342 FQTTGSVPIS TVIISEASGS RTILHAYSFL VADFRQRGVD VSQVAWQSRG ENSTTRP00000004890/1-297 ---------- ---------- --------FL VADFRQRGVD VS-VAWQSSG bmy_01071T0/1-394 FQTTGSVPIS TVISSEASGS RTILHAYSFL VADFRQRGVD VSQVAWQSSG BACU014544/1-349 FQTTGSVPIS TVISSKASGS RTILHAYSFL VADFRQRGVD VSQVAWQSSG 201 250 ENSP00000260599/1-298 -------IIN EASGSRTILY YDRSLPDVSA TDFEKVDLTQ FKWIHIE--- ENSBTAP00000015052/1-342 ETPCSCCIIN NSNGSRTIVL YDTNLPDVSA KDFEKVELTR FKWIHIE--- ENSTTRP00000004890/1-297 EAPCSCCIVN SSNGSRTIVL YDTNLPDVSA KDFEKVDLTR FKWIHIE--- bmy_01071T0/1-394 EAPCSCCIVN SSNGSRTIVL YDTNLPDVSA KDFEK----- ---------- BACU014544/1-349 EAPCSCCIVN SSNGSRTIVL YDTNLPDVSA KDFEKVDLTR FKWIHIEASP 251 300 ENSP00000260599/1-298 ---GRNASEQ VKMLQRIDAH NTRQPPEQKI RVSVEVEKPR EELFQLFGYG ENSBTAP00000015052/1-342 ---GRNASEQ VKMLQRI-QH NGRQPPEKQI QVSVEVEKPR EELYQLFGYG ENSTTRP00000004890/1-297 ---GRNASEQ VKMLQRIEQH NARQPPEQKI QVSVEVEKPR EELYQLLGYG bmy_01071T0/1-394 ---GRNASEQ VKMLQRIEQH NARQPPEQKI QVSVEVEKPR EELYQLLGYG BACU014544/1-349 ALPGRNASEQ VKMLQRIEQH NARQPPEQKI QVSVEVEKPR EELYQLLGYG 301 350 ENSP00000260599/1-298 DVVFVSKDVA KHLGFQSAEE ALRGLYGRVR KGAVLVCAWA EEGADALGPD ENSBTAP00000015052/1-342 DVVFVSKDVA KHFGFRSAKE ALRGLYSRVR KGATLVCAWA EEGADALGPD ENSTTRP00000004890/1-297 DVVFVSKDVA KHFGFQSAKE ALRGLYGRVR KGATLVCAWA EEGADALGPD bmy_01071T0/1-394 DVVFVSKDVA KHFGFQSAEE ALRGLYGRVR KGATLVCAWA EEGADALGPD BACU014544/1-349 DVVFVSKDVA KHFGFQSAEE ALRGLYGRVR KGATLVCAWA EEGADALGPD 351 400 ENSP00000260599/1-298 GKLLHSDAFP PPRVVDTLGA GDTFNASVIF SLSQGRSVQE ALRFGCQVAG ENSBTAP00000015052/1-342 GRLLHSDAFP PPRVVDTLGA GDTFNAAVIF SLSQGKSMQE ALRFGCQVAG ENSTTRP00000004890/1-297 GRLLHSDAFP PPQVVDTLGA GDTFNASVIF SLSQGKSMQE ALSFGCQVAG bmy_01071T0/1-394 GRLLHSDAFP PPQVVDTLGA GDTFNASVIF SLSQGKSMQE ALSFGCQVAG BACU014544/1-349 GRLLHSDAFP PPQVVDTLGA GDTFNASVIF SLSQGKSMQE ALSFGCQVAG 401 450 ENSP00000260599/1-298 KKCGLQGFDG IV ENSBTAP00000015052/1-342 KKCGLQGFDG IV ENSTTRP00000004890/1-297 KKCGLQGFDG IV bmy_01071T0/1-394 KKCGLQGFDG IV BACU014544/1-349 KKCGLQGFDG IV