KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:27 2014 Check: 00 .. Name: ENSP00000300747/1-485 Len: 622 Check: 6236 Weight: 1.00 Name: ENSBTAP00000015061/1-495 Len: 622 Check: 3379 Weight: 1.00 Name: ENSTTRP00000000967/1-485 Len: 622 Check: 6805 Weight: 1.00 Name: bmy_13067T0/1-583 Len: 622 Check: 6632 Weight: 1.00 Name: BACU004519/1-493 Len: 622 Check: 7621 Weight: 1.00 // 1 50 ENSP00000300747/1-485 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015061/1-495 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000967/1-485 ---------- ---------- ---------- ---------- ---------- bmy_13067T0/1-583 MGDAGVESLE CCPPRGQLQH SPQNEDTGEA REERVDVHDR EDDEEPVHHT BACU004519/1-493 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000300747/1-485 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015061/1-495 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000967/1-485 ---------- ---------- ---------- ---------- ---------- bmy_13067T0/1-583 DHGVNAAGEL IGSGPVGGAS ESCRRNQGAG RCWGLGLRAG AFSGSSWFYS BACU004519/1-493 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000300747/1-485 ---------M DPTALVEAIV EEVACPICMT FLREPMSIDC GHSFCHSCLS ENSBTAP00000015061/1-495 ---------M DPATLMEAVV EEVACPICMT FLKEPVSIDC GHSFCHSCLL ENSTTRP00000000967/1-485 ---------M DPAALVEAVV EEVACPICMT FLKEPVSIDC GHSFCHNCLS bmy_13067T0/1-583 CSEEGVTGAM DPAALVEAVV EEVACPICMT FLKEPVSIDC GHSFCHNCLS BACU004519/1-493 ---------M DPAALVEAVV EEVACPICMT FLKEPVSIDC GHSFCHNCLS 151 200 ENSP00000300747/1-485 GLWEIPGESQ NWGYTCPLCR APVQPRNLRP NWQLANVVEK VRLLRLHPGM ENSBTAP00000015061/1-495 GLWEVPGESQ NWAYSCPLCR APIEPRNLRP NWQLANVVEK VRRLGLHPGM ENSTTRP00000000967/1-485 GLWEVPGESQ NWGYSCPLCR APVQPRNLRP NWQLANVVEK VRRLGLHPGM bmy_13067T0/1-583 GLWEVPGESQ NWGYSCPLCR APVQPRNLRP NWQLANVVEK VRRLGLHPGM BACU004519/1-493 GLWEVPGESQ NWGYSCPLCR APVQPRNLRP NWQLANVVEK VRRLGLHPGM 201 250 ENSP00000300747/1-485 GLKGDLCERH GEKLKMFCKE DVLIMCEACS QSPEHEAHSV VPMEDVAWEY ENSBTAP00000015061/1-495 GLRADMCEPH REQLKMFCKE DGLIVCEACS RSPEHQAHSV VPMEDVAWDY ENSTTRP00000000967/1-485 GLKGDVCETH EEQLKMFCKE DGLIVCEACG RSPEHEAHSV VPMEDVAWDY bmy_13067T0/1-583 GLKGDVCETH EEQLKMFCKE DGLIVCEACG RSPEHEAHSV VPMEDVAWDY BACU004519/1-493 GLKGDVCEVH EDQLKMFCKE DGLIVCEACG RSPEHEAHSV VPMEDVAWDY 251 300 ENSP00000300747/1-485 KWELHEALEH LKKEQEEAWK LEVGERKRTA TWK------- -IQVETRKQS ENSBTAP00000015061/1-495 KWKLHEALEH LKKEQEEAWK LEVGERKRTA NWK------- -IQVETRKQS ENSTTRP00000000967/1-485 KWKLHEALEH LRKEQEEAWK LEVGERKRTA NWK------- -IQVETRKQS bmy_13067T0/1-583 KWKLHEALEH LRKEQEEAWK LE-------- ---------- -IQVETRKQS BACU004519/1-493 KWKLHEALEH LRKEQEEAWK LEVGERKRTA NWKASFPLGK GIQVETRKQS 301 350 ENSP00000300747/1-485 IVWEFEKYQR LLEKKQPPHR QLGAEVAAAL ASLQREAAET MQKLELNHSE ENSBTAP00000015061/1-495 IIWEFEKYRR LLKKKQPP-- --------AL ASLQQEERET MQKLELNHEA ENSTTRP00000000967/1-485 IIWEFEKYRR LLKKKQPPGR RLEVEAAAAL ASLEQEEGET TQKLGVSHNA bmy_13067T0/1-583 IIWEFEKYRR LLKKTQPPGR RLEVEAAAAL ASLEQEEGET TQKLGVSHNA BACU004519/1-493 IIWEFEKYRR LLKKTQPPGR RLEVEAAAAL ASLEQEEGET TQKLGVSHNA 351 400 ENSP00000300747/1-485 LIQQSQVLWR MIAELKERSQ RPVRWMLQDI QEVLNRSKSW SLQQPEPISL ENSBTAP00000015061/1-495 LIQQSRVLWR MIAELEERSQ RPVRWMLQGI QEVLNRSNSW SLQRPEPVSL ENSTTRP00000000967/1-485 LIQQSRVLWR MIAELEERSQ RPVRWMLQGI QEVLNRSKSW SLQRPEPVSL bmy_13067T0/1-583 LIQQSRVLWR MIAELEERSQ RPVRWMLQGI QEVLNRSKSW SLQRPEPVSL BACU004519/1-493 LIQQSRVLWR MIAELEERSQ RPVRWMLQGI QEVLNRSKSW SLQRPEPVSL 401 450 ENSP00000300747/1-485 ELKTDCRVLG LREILKTYA- ---------- ---------A DVRLDPDTAY ENSBTAP00000015061/1-495 ELKTDCRVLG LREILKTYAE MSPKPPHSVS GYQPRPFSSA DVRLDPDTAY ENSTTRP00000000967/1-485 ELKTDCRVLG LREILKTYA- ---------- ---------A DVRLDPDTAY bmy_13067T0/1-583 ELKTDCRVLG LREILKTYA- ---------- ---------A DVRLDPDTAY BACU004519/1-493 ELKTDCRVLG LREILKTYA- ---------- ---------A DVRLDPDTAY 451 500 ENSP00000300747/1-485 SRLIVSEDRK RVHYGDTNQK LPDNPERFYR YNIVLGSQCI SSGRHYWEVE ENSBTAP00000015061/1-495 SRLIVSEDRK CVRYGDTKQK LPDNPERFYR YNIVLGSQCI SSGRHYWEVE ENSTTRP00000000967/1-485 SRLIVSEDRK CVRYGDTKQK LPDNPERFYR YNIVLGSQCI SSGRHYWEVE bmy_13067T0/1-583 SRLIVSEDRK CVRYGDTKQK LPDNPERFYR YNIVLGSQCI SSGRHYWEVE BACU004519/1-493 SRLIVSEDRK CVRYGDTKQK LPDNPERFYR YNIVLGSQCI SSGRHYWEVE 501 550 ENSP00000300747/1-485 VGDRSEWGLG VCKQNVDRKE VVYLSPHYGF WVIRLRKGNE YRAGTDEYPI ENSBTAP00000015061/1-495 VGDRSEWGLG VCKENVDRKE VVFLSPHYGF WVIRLRKGNE YRAGTDEYPL ENSTTRP00000000967/1-485 VGDRSEWGLG VCKENVDRKE VVYLSPHYGF WVIRLRKGDE YRAGTDEYPL bmy_13067T0/1-583 VGDRSEWGLG VCKENVDRKE VVYLSPHYGF WVIRLRKGNE YRAGTDEYPL BACU004519/1-493 VGDRSEWGLG VCKENVDRKE VVYLSPHYGF WVIRLRKGNE YRAGTDEYPL 551 600 ENSP00000300747/1-485 LSLPVPPRRV GIFVDYEAHD ISFYNVTDCG SHIFTFPRYP FPGRLLPYFS ENSBTAP00000015061/1-495 LSLPVPPRRV GVFLDYEAHD ISFYNVTDNG SHIFTFPHYP FPGRLLPYFS ENSTTRP00000000967/1-485 LSLPVPPRRV GVFLDYEAHD ISFYNVTDSG SHIFTFPHYP FPGRLLPYFS bmy_13067T0/1-583 LSLPVPPRRV GVFLDYEAHD ISFYNVTDSG SHIFTFPHYP FPGRLLPYFS BACU004519/1-493 LSLPVPPRRV GVFLDYEAHD ISFYNVTDSG SHIFTFPHYP FPGRLLPYFS 601 650 ENSP00000300747/1-485 PCYSIGTNNT APLAICSLDG ED ENSBTAP00000015061/1-495 PCYSIGANNT APLAICSLDG ED ENSTTRP00000000967/1-485 PCYSIGANNT APLAICSLDG DD bmy_13067T0/1-583 PCYSIGANNT APLAICSLDG EE BACU004519/1-493 PCYSIGANNT APLAICSLDG EE