KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:32 2014 Check: 00 .. Name: BACU010635/1-348 Len: 353 Check: 1064 Weight: 1.00 Name: ENSP00000303575/1-350 Len: 353 Check: 9389 Weight: 1.00 Name: ENSBTAP00000015090/1-349 Len: 353 Check: 8467 Weight: 1.00 Name: bmy_13441T0/1-301 Len: 353 Check: 2064 Weight: 1.00 Name: ENSTTRP00000003959/1-350 Len: 353 Check: 6956 Weight: 1.00 // 1 50 BACU010635/1-348 MAGRFVGKTL ATVSLSVALA SVTLKSLGRC SIAACSNSFS SCGFHLNSNT ENSP00000303575/1-350 MAGRLLGKAL AAVSLSLALA SVTIRSSRCR GIQAFRNSFS SSWFHLNTNV ENSBTAP00000015090/1-349 MAGGFLGKTL AAVSLPVALA SVTVKSLGSC SVAACRNSLS SCRFHVNSNI bmy_13441T0/1-301 MAGRFLGKTL ATVSLSVALA SVTLKSLGRC SIAACSNSFS SCGFHLNSNT ENSTTRP00000003959/1-350 MAGRFLGKTL ATVSLSVALA SVTLKSLGRC SIAACSNSFS SCGFHLNSNM 51 100 BACU010635/1-348 MSGSNGTKEN SHNKARTSPY PGSKVQRSQV PNEKVGWLVE WQDYNPVEYT ENSP00000303575/1-350 MSGSNGSKEN SHNKARTSPY PGSKVERSQV PNEKVGWLVE WQDYKPVEYT ENSBTAP00000015090/1-349 MSGFNGTKEN SHNKARTSPY PGSKVQRSQV PNDKVDWLVE WHDYNPVEYT bmy_13441T0/1-301 MSGSNGTKEN SHNKARTSPY PGSEVQRSQV PNEKVGWLVE WQDYNPVEYT ENSTTRP00000003959/1-350 MSGSDGTKEN SHNKARTSPY PGSKVQRSQV PNEKVGWLVE WQDYNPVEYT 101 150 BACU010635/1-348 AVSVLAGPRW ADPQISESNF SPKFNEKDGH VERKSQNGLY EIENGRPRNP ENSP00000303575/1-350 AVSVLAGPRW ADPQISESNF SPKFNEKDGH VERKSKNGLY EIENGRPRNP ENSBTAP00000015090/1-349 AVSVLAGPQW ADPQITESNF SPKFNEKDGQ VERKSQNGLY EVKNGRPRNP bmy_13441T0/1-301 AVSVLAGPRW ADPQISESNF SPKFNEKDGH VERKSQNGLY EIENGRPRNP ENSTTRP00000003959/1-350 AVSVLAGPRW ADPQISESSF SPKFNEKDGH VERKSQNGLY EIENGRPRNP 151 200 BACU010635/1-348 AGRTGLVGRG LLGRWGPNHA ADPIIT---- -SPVLIVLYL DHGNSLLAGF ENSP00000303575/1-350 AGRTGLVGRG LLGRWGPNHA ADPIITRWKR DSSGNKIMHP VSGKHILQ-F ENSBTAP00000015090/1-349 AGRTGLVGRG LLGRWGPNHA ADPIITRWKR DRSGNKITHP ISGKNILQ-F bmy_13441T0/1-301 AGRTGLVGRG LLGRWGPNHA ADPIITRWKR DRSGNKITHP ISGKNILQ-F ENSTTRP00000003959/1-350 AGRTGLVGRG LLGRWGPNHA ADPIITRWKR DRSGNKITHP ISGKNILQ-F 201 250 BACU010635/1-348 LASSLTSLQT NFQTFVKGMV DPGEKISATL KREFGEEALN SLQKSGAEKR ENSP00000303575/1-350 VAIKRKD--C GEWAIPGGMV DPGEKISATL KREFGEEALN SLQKTSAEKR ENSBTAP00000015090/1-349 VAIKRKD--C GEWAIPGGMV DPGEKISATL KREFGEEALN SLQKSSAEKR bmy_13441T0/1-301 VAIKRKD--C GEWAIPG--- ---------- ---------- ---------- ENSTTRP00000003959/1-350 VAIKRKD--C GEWAIPGGMV DPGEKISATL KREFGEEALN SLQKSGAEKR 251 300 BACU010635/1-348 ELEEKLHKLF SQEHLVIYKG YVDDPRNTDN AWMETEAVNY HDETGEIMDN ENSP00000303575/1-350 EIEEKLHKLF SQDHLVIYKG YVDDPRNTDN AWMETEAVNY HDETGEIMDN ENSBTAP00000015090/1-349 ELQEKLQKLF NQEHLVIYKG YVDDPRNTDN AWMETEAVNY HDETGEIMDN bmy_13441T0/1-301 ---------- ------IYKG YVDDPRNTDN AWMETEAVNY HDETGEIMDN ENSTTRP00000003959/1-350 ELEEKLHKLF SQEHLVIYKG YVDDPRNTDN AWMETEAVNY HDETGEIMDN 301 350 BACU010635/1-348 LTLEAGDDAG KVKWVDMSDK LKLYASHSQF IQLVAEKRDA HWSEDSETDC ENSP00000303575/1-350 LMLEAGDDAG KVKWVDINDK LKLYASHSQF IKLVAEKRDA HWSEDSEADC ENSBTAP00000015090/1-349 LTLEAGDDAG KVKWMDISDK LKLYASHAQF IKSVAEKRDA HWSKDSETGC bmy_13441T0/1-301 LTLEAGDDAG KVKWVDISDK LKLYASHSQF IKLVAEKRDA HWSEDSETDC ENSTTRP00000003959/1-350 LTLEAGDDAG KVKWVDISDK LKLYASHFQF IKLVAEKRDA HWSEDSETDC 351 400 BACU010635/1-348 RGL ENSP00000303575/1-350 HAL ENSBTAP00000015090/1-349 PG- bmy_13441T0/1-301 HGL ENSTTRP00000003959/1-350 HGL