KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:54:35 2014 Check: 00 .. Name: bmy_08230T0/1-684 Len: 800 Check: 4860 Weight: 1.00 Name: ENSTTRP00000012575/1-800 Len: 800 Check: 2054 Weight: 1.00 Name: ENSP00000360412/1-800 Len: 800 Check: 9531 Weight: 1.00 Name: ENSBTAP00000015105/1-799 Len: 800 Check: 5076 Weight: 1.00 // 1 50 bmy_08230T0/1-684 MKVRRNKKQV PSFRKLLKTS KVKLENKLKN KQFKQQSTLK KYRKEQRKLR ENSTTRP00000012575/1-800 MKFRRNKKQV PSFRKLLKTS KVKLENKLKN KQFKQQSTLK KYRKEQRKLR ENSP00000360412/1-800 MKARRNKKQI PSFRKLIKTS KVKLENKLKN KQFKQQSTLK KYRKEQRKLR ENSBTAP00000015105/1-799 MKARRNKKQV PSFRKLLKTS KVKLENKLKN KQFKQQSTIK KYRKEQRKLR 51 100 bmy_08230T0/1-684 QAVKDAVSKK PIPLEDPKEK RPGKRIEREE EEEEEALPLD MMDEDDLQLM ENSTTRP00000012575/1-800 QAVKDAVSKK PIPLEDPKEK RPGKRIEREE EEEEEALPLD MMDEDDLQLM ENSP00000360412/1-800 QAVKDAVSKK PIPLENPKEK RPGKRIEREE EEEEEALPLD MMDEDDLQLM ENSBTAP00000015105/1-799 QAVKDAVSKK PVPLEDPKEK QPGKRIEREE EEEEEALPLD MMDEDDLQLM 101 150 bmy_08230T0/1-684 KDLGQRASFL TRDLSSSEPV HARKRKHEHV IDKYEKIPRT LQTAPEKELI ENSTTRP00000012575/1-800 KDLGQRASFL TRDLSSSEPV HARKRKHEHV IDKYEKIPRT LQTAPEKELI ENSP00000360412/1-800 KDLGQRVSFL TRDLSSSEPV HAKKRKHERI IDKYEKIPRT LQTAPEKELI ENSBTAP00000015105/1-799 KDLGQRASFL TRDISSSEPV HVKKRKHESV IDKYEKIPRT LQTAPEKELI 151 200 bmy_08230T0/1-684 HLLPIKDKSG IIPQTREKP- ---------- --------EV IEEPIEELTL ENSTTRP00000012575/1-800 HLLPIKDKSG IIPQTREKPX XXXXXXXXXX XXXXXXXXXI IEEPIKELTL ENSP00000360412/1-800 HLLPIKDKSG IIPQTREKPV TDSNKDEEDQ EEERELEEEI IEDPIQELTI ENSBTAP00000015105/1-799 HLLPIKDKSG IIPQTREKPV IDSNQDEEDQ -EEMEPEEEI IEKPIKELTL 201 250 bmy_08230T0/1-684 EEHLIERKKK LQEKKMRIAA LASAILSDPE SNI------- ---------- ENSTTRP00000012575/1-800 EEHLIERKKK LQEKKMRIAA LASAILSDPE SNIKKLKELR SMLMEQDPDV ENSP00000360412/1-800 EEHLIERKKK LQEKKMHIAA LASAILSDPE NNIKKLKELR SMLMEQDPDV ENSBTAP00000015105/1-799 EEHLIERKKK LQERKMHIAA LASAILSDPE SNIKKLKELR SMLMEQDPDV 251 300 bmy_08230T0/1-684 ---------- ---------- ---------- -------RKE TQKLREFEEG ENSTTRP00000012575/1-800 AVTVRKLVIV SLMELFKDIT PSYKIRPLTE AEKSTKXXXX XXXXXXXXXX ENSP00000360412/1-800 AVTVRKLVIV SLMELFKDIT PSYKIRPLTE AEKSTKTRKE TQKLREFEEG ENSBTAP00000015105/1-799 AVTVRKLVIV SLMELFKDIT PSYKIRPLTE AEKSTKIRKE TQKLREFEEG 301 350 bmy_08230T0/1-684 LVSQYKFYLE NLEQMVKDWK QRKLKKSNVV SLKAYKGLAE VAVKSLCELL ENSTTRP00000012575/1-800 XXXXXXXXXX XXXXXXXXWK QRKLKKSNVV SLKAYKGLAE VAVKSLCELL ENSP00000360412/1-800 LVSQYKFYLE NLEQMVKDWK QRKLKKSNVV SLKAYKGLAE VAVKSLCELL ENSBTAP00000015105/1-799 LVSQYKFYLE NLEQMIKDWK QRKLKKSNVV SLKAYKGLAE VAVKSLCELL 351 400 bmy_08230T0/1-684 VALPHFNFHN NIIVLVVPLM NDMSKL---- ---------- ---------- ENSTTRP00000012575/1-800 VALPHFNFHN NIIVLIVPLM NDMSKLVSEM CCEAVKKLFK QDKLGQASLG ENSP00000360412/1-800 VALPHFNFHN NIIVLIVPLM NDMSKLISEM CCEAVKKLFK QDKLGQASLG ENSBTAP00000015105/1-799 VALPHFNFHN NIIVLIVPLM NDMSKLVSEM CCEAVKKLFK QDKLGQASLG 401 450 bmy_08230T0/1-684 ---------- ---------M LKTFLCLRIK EVEVKKDTED INKQKKFMTF ENSTTRP00000012575/1-800 VIKVISGFVK GRNYEVRPEX XXXXXXXXXK EVEVKKDTED INKQKKFMTF ENSP00000360412/1-800 VIKVISGFVK GRNYEVRPEM LKTFLCLRIK EVEVKKDTED INKPKKFMTF ENSBTAP00000015105/1-799 VIKVISGYVK GRNYEVRPEM LKTFLCLRIK EIEVKKDTED INKPKKFMTF 451 500 bmy_08230T0/1-684 KEKRKTLSRM QRKWKKAEEK LERELREAEA SESSEKKLKL HTETLNIVFV ENSTTRP00000012575/1-800 KEKRKTLSRM QRKWKKAEEK LERELREAEA SESTEKKLKL HTETLNIVFV ENSP00000360412/1-800 KEKRKSLSRM QRKWKKAEEK LERELREAEA SESTEKKLKL HTETLNIVFV ENSBTAP00000015105/1-799 KEKRKTLSRM QRKWKKAEEK LERELREAEA SESTEKKLKL HTETLNIVFV 501 550 bmy_08230T0/1-684 TYFRILKKAQ RSPLLPAVLE GLAKFAHLIN VEFFDDLLVV LHSLIESGDL ENSTTRP00000012575/1-800 TYFRILKKAQ RSPLLPAVLE GLAKFAHLIN VEFFDDLLVV LHSLIESGDL ENSP00000360412/1-800 TYFRILKKAQ RSPLLPAVLE GLAKFAHLIN VEFFDDLLVV LHTLIESGDL ENSBTAP00000015105/1-799 TYFRILKKAQ RSPLLPAVLE GLAKFAHLIN VEFFDDLLVV LHSLIESGDL 551 600 bmy_08230T0/1-684 SYQESLHCVQ TAFHVLSGQG DVLNIDPMKF YTHLYKTLFK LHAGATNEGV ENSTTRP00000012575/1-800 SYQESLHCVQ TAFHVLSGQG DVLNIDPMKF YTHLYKTLFK LHAGATNEGV ENSP00000360412/1-800 SYQESLHCVQ TAFHILSGQG DVLNIDPLKF YTHLYKTLFK LHAGATNEGV ENSBTAP00000015105/1-799 SYQESLHCVQ TAFHILSGQG DVLNIDPMKF YTHLYKTLFK LHAGATNEGV 601 650 bmy_08230T0/1-684 EIVLQCLDVM LTKRRKQVSQ QRALAFIKRL CTLALHVLPN SSIGILATNR ENSTTRP00000012575/1-800 EIVLQCLDVM LTKRRKQVSQ QRALAFIKRL CTLALHVLPN SSIGILATNR ENSP00000360412/1-800 EIVLQCLDVM LTKRRKQVSQ QRALAFIKRL CTLALHVLPN SSIGILATTR ENSBTAP00000015105/1-799 ETVLQCLDVM LTKRRKQVSQ QRALAFIKRL CTLALHVLPN SSIGILATNR 651 700 bmy_08230T0/1-684 ILMHTFPKTD LLLDNESQGS GVFLPELDEP EYCNAQNTAL WELHALRRHY ENSTTRP00000012575/1-800 ILMHTFPKTD LLLDNESQGS GVFLPELDEP EYCNAQNTAL WELHALRRHY ENSP00000360412/1-800 ILMHTFPKTD LLLDSESQGS GVFLPELDEP EYCNAQNTAL WELHALRRHY ENSBTAP00000015105/1-799 ILMHTFPKTD LLLDNESQGS GVFLPELDEP EYCNAQNTAL WELHALRRHY 701 750 bmy_08230T0/1-684 HPIVQRFAAH LIAGAPSEGS EALKPELSRR SAAELFEAYS MAAMTFNPPV ENSTTRP00000012575/1-800 HPIVQRFAAH LIAGAPSEGS EALKPELSRR SPAELFEAYS MAAMTFNPPV ENSP00000360412/1-800 HPIVQRFAAH LIAGAPSEGS GALKPELSRR SATELFEAYS MAEMTFNPPV ENSBTAP00000015105/1-799 HPIVRRLAVH LIAGAPSEGS EALKPELSRR SAAELFEAYS MAAMTFNPPV 751 800 bmy_08230T0/1-684 ESSNSKRKDK VLQGDSFLSE ELSQLIKRHC SEVATQLPLD FTKYLETSLR ENSTTRP00000012575/1-800 ESSNSKRKDK VLQGDSFLSE EISQLIKRHC SEVATQSPLD FTKYLETSVR ENSP00000360412/1-800 ESSNPKIKGK FLQGDSFLNE DLNQLIKRYS SEVATESPLD FTKYLKTSLH ENSBTAP00000015105/1-799 ESSNSKRKDK VLQGDSFLNE ELNQLIKRHC SQVATPLPLD FTKCLETSLR