KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:36 2014 Check: 00 .. Name: ENSP00000407592/1-235 Len: 235 Check: 8249 Weight: 1.00 Name: ENSBTAP00000015114/1-235 Len: 235 Check: 7799 Weight: 1.00 Name: bmy_07260T0/1-221 Len: 235 Check: 9313 Weight: 1.00 Name: ENSTTRP00000006116/1-235 Len: 235 Check: 7499 Weight: 1.00 Name: BACU009548/1-181 Len: 235 Check: 7467 Weight: 1.00 // 1 50 ENSP00000407592/1-235 MFIWTSGRTS SSYRHDEKRN IYQKIRDHDL LDKRKTVTAL KAGEDRAILL ENSBTAP00000015114/1-235 MFIWTSGRTS SSYRHDEKRN IYQKIRDHDL LDKRKTVTAL KAGEDRAILL bmy_07260T0/1-221 MF-------- ------NLRN IYQKIRDHDL LDKRKTVTAL KAGEDRAILL ENSTTRP00000006116/1-235 MFIWTSGRTS STYRHDEKRN IYQKIRDHDL LDKRKTVTAL KAGEDRAILL BACU009548/1-181 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000407592/1-235 GLAMMVCSIM MYFLLGITLL RSYMQSVWTE ESQCTLLNAS ITETFNCSFS ENSBTAP00000015114/1-235 GLAMMVCSIM MYFLLGITLL RSYMQSVWTE EAQCTLLNAS ITETFNCSFS bmy_07260T0/1-221 GLAMMVCSIM MYFLLGITLL RSYMQSVWTE EAECTLLNAS ITETFNCSFS ENSTTRP00000006116/1-235 GLAMMVCSIM MYFLLGITLL RSYMQSVWTE EAQCTLLNAS ITETFNCSFS BACU009548/1-181 ----MVCSIM MYFLLGITLL RSYMQSVWTE EAQCTLLNAS ITETFNCSFS 101 150 ENSP00000407592/1-235 CGPDCWKLSQ YPCLQVYVNL TSSGEKLLLY HTEETIKINQ KCSYIPKCGK ENSBTAP00000015114/1-235 CGPDCWKLSQ YPCLQVYVNL TSSGEKLLLY HTEETIKINQ KCSYIPKCGK bmy_07260T0/1-221 CGPDCWKLSQ YPCLQVYVNL TSSGEKLLLY HTEETMKINQ KCSYIPKCGK ENSTTRP00000006116/1-235 CGPDCWKLSQ YPCLQVYVNL TSSGEKLLLY HTEETMKINH ECSYIPKCGK BACU009548/1-181 CGPDCWKLSQ YPCLQVYVNL TSSGEKLLLY HTEETMKINQ KCSYIPKCGK 151 200 ENSP00000407592/1-235 NFEESMSLVN VVMENFRKYQ HFSCYSDPEG NQKSVILTKL YSSNVLFHSL ENSBTAP00000015114/1-235 NFEESMSLVN VVMENFRKYQ HFSCYSDPEG NQKSVILTKL YSSNVLFHSL bmy_07260T0/1-221 NFEESMSLVN VVMENFRKYQ HFSCYSDPEG NQKSVILTKL YSSNVLFHSL ENSTTRP00000006116/1-235 NFEESMSLVN VVMENFRKYQ HFSCYSDPEG NQKSVILTKL YSSNVLFHSL BACU009548/1-181 NFEESMSLVN VVMENFRKYQ HFSCYSDPEG NQKSVILTKL YSSNVLFHSL 201 250 ENSP00000407592/1-235 FWPTCMMAGG VAIVAMVKLT QYLSLLCERI QRINR ENSBTAP00000015114/1-235 FWPTCMMAGG VAIVAMVKLT QYLSLLCERI QRINR bmy_07260T0/1-221 FWPTCMMAGG LAIVAMVKLT QYLSLLCERI QQINR ENSTTRP00000006116/1-235 FWPTCMMAGG VAIVAMVKLT QYLSLLCERI QQINR BACU009548/1-181 FWPTCMMAGG VAIVAMVKLT QYLSLLCERI QQINR