KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:41 2014 Check: 00 .. Name: ENSTTRP00000004981/1-1151 Len: 1158 Check: 5767 Weight: 1.00 Name: ENSP00000334642/1-1154 Len: 1158 Check: 9437 Weight: 1.00 Name: ENSBTAP00000015152/1-1154 Len: 1158 Check: 6774 Weight: 1.00 Name: bmy_08171T0/1-813 Len: 1158 Check: 956 Weight: 1.00 Name: BACU004689/1-800 Len: 1158 Check: 1360 Weight: 1.00 // 1 50 ENSTTRP00000004981/1-1151 MGLLLMILAS AVLGSLLTLL TQFLLLYRKQ PEPPPDEAAR AADGFRYIKP ENSP00000334642/1-1154 MGLLLMILAS AVLGSFLTLL AQFFLLYRRQ PEPPADEAAR AGEGFRYIKP ENSBTAP00000015152/1-1154 MGLLLMILAS AVLGSFLTLL TQFLLLYRKQ PEPPPDEAAR AADGFRYIKP bmy_08171T0/1-813 MCCVFSLH-- ---------- ---------- ---------- ------YCEP BACU004689/1-800 MGKPFLVH-- ---------- ---------- ---------- ------NVK- 51 100 ENSTTRP00000004981/1-1151 VPDLALREYL Y-GGGGAEEP SGGPPEGGPT P--APETPAP PTRETCYFLN ENSP00000334642/1-1154 VPGLLLREYL Y-GGGRDEEP SGAAPEGGAT PTAAPETPAP PTRETCYFLN ENSBTAP00000015152/1-1154 VPDLPLREYL YGGGGGAEEP SGGPPEGGAT P--APETPAP PTRETCYFLN bmy_08171T0/1-813 I--------- ---------- ---------- ---------- ---------- BACU004689/1-800 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000004981/1-1151 ATILFLFREL RDTALARRWV TKKIKVEFEE LLQTKTAGRL LEGLSLRDVF ENSP00000334642/1-1154 ATILFLFREL RDTALTRRWV TKKIKVEFEE LLQTKTAGRL LEGLSLRDVF ENSBTAP00000015152/1-1154 AIILFLFREL RDTALARRWV TKKIKVEFEE LLQTKTAGRL LEGLSLRDVF bmy_08171T0/1-813 ---------- ---------- ---------- ---------- ---------- BACU004689/1-800 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000004981/1-1151 LGEAVPFIKT IRLLRPVVPS ATGEPDVPEG EAL-PATSPE ELAFEAEVEY ENSP00000334642/1-1154 LGETVPFIKT IRLVRPVVPS ATGEPDGPEG EAL-PAACPE ELAFEAEVEY ENSBTAP00000015152/1-1154 LGETVPFIKT IRLLRPVAPS ATGEPDGPEG EALPPATTPE ELAFEAEVEY bmy_08171T0/1-813 ---------- ---------- ---------- ---------- ---------- BACU004689/1-800 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000004981/1-1151 SGGFHLAIDV DLVFGKSAYL FVKLSRVVGR LRFVLTRVPF THWFFSFVED ENSP00000334642/1-1154 NGGFHLAIDV DLVFGKSAYL FVKLSRVVGR LRLVFTRVPF THWFFSFVED ENSBTAP00000015152/1-1154 NGGFHLAIDV DLVFGKSAYL FVKLSRVVGR LRFVLTRVPF THWFFSFVED bmy_08171T0/1-813 ---------- -----ESVFI FLSLSK---- ---------- ---------- BACU004689/1-800 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000004981/1-1151 PLIDFEVRSQ FEGRPMPQLT SIIVNQLKKV IKRKHTLPSY KIRFKPFFPF ENSP00000334642/1-1154 PLIDFEVRSQ FEGRPMPQLT SIIVNQLKKI IKRKHTLPNY KIRFKPFFPY ENSBTAP00000015152/1-1154 PLIDFEVRSQ FEGRPLPQLT SFIVNQLKKI IKRKHTLPSY KIRYKPFFPF bmy_08171T0/1-813 ---------- ---------- ---------- ---------- ---------- BACU004689/1-800 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000004981/1-1151 QTLQGFEEDD EEHIHIQQWA LTEGRLKVTL LECSRLLIFG SYDREANIHC ENSP00000334642/1-1154 QTLQGFEE-D EEHIHIQQWA LTEGRLKVTL LECSRLLIFG SYDREANVHC ENSBTAP00000015152/1-1154 QTLQGFEDDD EELIHIQQWA LTEGRLKVTL LECSRLLIFG SYDTEANIHC bmy_08171T0/1-813 ---------- ---------- ---------- ---------- ---------- BACU004689/1-800 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000004981/1-1151 TLELSSGLWE EKQRSSIKTV ELIKGNLQSV GLTLRLVQST DGYAGHVIIE ENSP00000334642/1-1154 TLELSSSVWE EKQRSSIKTV ELIKGNLQSV GLTLRLVQST DGYAGHVIIE ENSBTAP00000015152/1-1154 TLELSTGVWE EKQRSSIKTV ELIKGNLQSV GLTLRLVQST DGYAGHVIIE bmy_08171T0/1-813 ---------- ---------V ELIKGNLQSV GLTLRLVQST DGYAGHVIIE BACU004689/1-800 ---------- ---------V ELIKGNLQSV GLTLRLVQST DGYAGHVIIE 401 450 ENSTTRP00000004981/1-1151 TVAPNSPAAI ADLQRGDRLI AIGGVKITST LQVLKLIKQA GDRVLVYYER ENSP00000334642/1-1154 TVAPNSPAAI ADLQRGDRLI AIGGVKITST LQVLKLIKQA GDRVLVYYER ENSBTAP00000015152/1-1154 TVAPNSPAAI ANLQRGDRLI AIGGVKITST LQVLKLIKQA GDRVLVYYER bmy_08171T0/1-813 TVAPNSPAAI ADLQRGDRLI AIGGVKITST LQVLKLIKQA GDRVLVYYER BACU004689/1-800 TVAPNSPAAI ADLQRGDRLI AIGGVKITST LQVLKLIKQA GDRVLVYYER 451 500 ENSTTRP00000004981/1-1151 PVGQSNQGAV LQDNFGQLED NFLIGPCQPN YEEETSGLAV DAENRDLDSE ENSP00000334642/1-1154 PVGQSNQGAV LQDNFGQLEE NFLSSSCQSG YEEEAAGLTV DTESRELDSE ENSBTAP00000015152/1-1154 PVGQSNQGTV LQDNFGQLEE NFLSGSCQPN FEEEATGLAV DAENRDLDSE bmy_08171T0/1-813 PVGQSNQGAV LQDNFGQLED NFLSGSCQPN YEEETSGLAV DAENRDLDSE BACU004689/1-800 PVGQSNQGAV LQDNFGQLED NFLSGSCQPN YEEETSGLAV DAENRDLDSE 501 550 ENSTTRP00000004981/1-1151 FEDLASDVRA QTEVKDEAQS LSHSPKRTPT TLSVKPLGTI SPVLNRKLVV ENSP00000334642/1-1154 FEDLASDVRA QNEFKDEAQS LSHSPKRVPT TLSIKPLGAI SPVLNRKLAV ENSBTAP00000015152/1-1154 FEDLASDVRA QTEAREEAQS LSHSPKRTPT TLSVKPLGTI SPVLNRKLVV bmy_08171T0/1-813 FEDLASDVRA QTEVKDEAQS LSHSPRRTPT TLSVKPLGTI SPVLNRKLVV BACU004689/1-800 FEDLASDVRA QTEVKDEAQS LSHSPRRAPT TLSVKPLGTI SPVLNRKLVV 551 600 ENSTTRP00000004981/1-1151 GSYPPPPKLP SKR-NKPLAL KSSEITEPAQ VSKPTQGSTF KPPVPPRPQV ENSP00000334642/1-1154 GSHPLPPKIQ SKDGNKPPPL KTSEITDPAQ VSKPTQGSAF KPPVPPRPQA ENSBTAP00000015152/1-1154 GSYPPPPKLP SKEGNKPLAL KSSEVTEPAQ VSKPTQGPSF KPPVPPRPQV bmy_08171T0/1-813 GSYPPPPKLP SKEGNKPLAL KSSEITEPAQ VSKPTQGSTF KPPVPPRPQV BACU004689/1-800 GSYPPPPKLP SKEGNKPLAL KSSEITEPAQ VSKPTQGSTF KPPVPPRPQV 601 650 ENSTTRP00000004981/1-1151 KVPLPSADAP N-AEPDILVE KPENVLPPPA ADKPAEKQAK NLDHVEEAAT ENSP00000334642/1-1154 KVPLPSADAP NQAEPDVLVE KPEKVVPPPL VDKSAEKQAK NVDAIDDAAA ENSBTAP00000015152/1-1154 KVPLPSSDDP TQAEPDISVE KPEKVLPPPP ADKHAEKQVK NLDHIEEAAA bmy_08171T0/1-813 KVPLPSADAP NQAEPDILVE KPEKVLPPPA ADKPAEKQAK NLDHVEEAAA BACU004689/1-800 KVPLPSADAP NQAELDTLVE KPEKVLPPLA ADKPAEKQAK NLDHVEEAAA 651 700 ENSTTRP00000004981/1-1151 AKQFPAKXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334642/1-1154 PKQFLAKQEV AKDVTSETSC PTKDSSDDRQ TWESSEILYR NKLGKWTRTR ENSBTAP00000015152/1-1154 AKQFLAKQEV AKDLTSESAC PPKDSSDDHQ TWESSEIPYR KKLGKWTRTK bmy_08171T0/1-813 AKQFLAKQEV AKDLTSESSC PPKDSSDDHQ TWESSEILYR NKLGKWTRTR BACU004689/1-800 AKQFLAKQEV AKDLTSESSC PPKDSSDDHQ TWESSEILYR NKLGKWTRTR 701 750 ENSTTRP00000004981/1-1151 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334642/1-1154 ASCLFDIEAC HRYLNIALWC RDPFKLGGLI CLGHVSLKLE DVALGCLATS ENSBTAP00000015152/1-1154 ASCFFDIEAC HRYLNIALWC RDPFKLGGLI CLGHVSLKLE EVALGCLATS bmy_08171T0/1-813 ASCLFDVDAC HRYLNVALWC REPFKLGGLI CLGHVSLKLE EVALGCLATS BACU004689/1-800 ASCLFDVDAC HRYLNVALWC REPFKLGGLI CLGHVSLKLE EVALGCLATS 751 800 ENSTTRP00000004981/1-1151 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334642/1-1154 NTEYLSKLRL EAPSPKAIVT RTALRNLSMQ KGFNDKFCYG DITIHFKYLK ENSBTAP00000015152/1-1154 NMEYLSKFRL EAPSPKAMVT RTALRNLSMQ KGFNDKFCYG DITVHFKYLK bmy_08171T0/1-813 NMEYLSKFRL EAPSPKAMVT RTALRNLSMQ KGFNDKFCFG DITVHFKYLK BACU004689/1-800 NMEYLSKFRL EAPSPKAMVT RTALRNLSMQ KGFNDKFCFG DITVHFKYLK 801 850 ENSTTRP00000004981/1-1151 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334642/1-1154 EGESDHHVVT NVEKEKEPHL VEEVSVLPKE EQFVGQMGLT ENKHSFQDTQ ENSBTAP00000015152/1-1154 EGEPD-HVVT NLEKEKELHL VEEVSALPKE EHFVGQMGLT ENKHSFQDTQ bmy_08171T0/1-813 EGEPDHHVVT NLEKEKELHL VEEVSALPKE EHFVGQMGLT ENKHSFQDTQ BACU004689/1-800 EGEPDHHVVT NLEKEKELHL VEEVSALSKE EHFVGQMGLT ENKHSFQDTQ 851 900 ENSTTRP00000004981/1-1151 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334642/1-1154 FQNPTWCDYC KKKVWTKAAS QCMFCAYVCH KKCQEKCLAE TSVCGATDRR ENSBTAP00000015152/1-1154 FQNPTWCDYC KKKVWTKAAS QCMFCAYVCH KKCQEKCLAE TPLCGATDQR bmy_08171T0/1-813 FQNPTWCDYC KKKVWTKAAS QCMFCAYVCH KKCQEKCLAE TPLCGATDQR BACU004689/1-800 FQNPTWCDYC KKKVWTKAAS QCMFCAYVCH KKCQEKCLAE TPLCGATDQR 901 950 ENSTTRP00000004981/1-1151 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334642/1-1154 IDRTLKNLRL EGQETLLGLP PRVDAEASKS VNKTTGLTRH IINTSSRLLN ENSBTAP00000015152/1-1154 IDRALKNLRL EGQETLLGLP PRVDAEAGKS VNRTTGLTRH IINTSSRLLN bmy_08171T0/1-813 IDRALKNLRL EGQEALLGLP PRVDAEAGKS VNRTTGLTRH IINTSSRLLN BACU004689/1-800 IDRALKNLRL EGQETLLGLP PRVDAEAGKS VNRTTGLTRH IINTSSRLLN 951 1000 ENSTTRP00000004981/1-1151 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334642/1-1154 LRQVSKTRLS EPGTDLVEPS PKHTPNTSDN EGSDTEVCGP NSPSKRGNST ENSBTAP00000015152/1-1154 LRPVSKTRLS EPGTDLVEPS PKHTPNTSDN EGSDTEVCGS NSPSKRGNSA bmy_08171T0/1-813 LRQVSKTRLS EPGTDLVEPS PKHTPNTSDN EGSDTEICGP NSPSKRGNNT BACU004689/1-800 LRQVSKTRLS EPGTDLVEPS PKHTPNTSDN EGSDTEICGP NSPSKRGNNT 1001 1050 ENSTTRP00000004981/1-1151 XXXXXXXXXX XXXXXXXXXX XXXXXXYRGL PTEERIQKLE FMLDKLQNEI ENSP00000334642/1-1154 GIKLVRKEGG LDDSVFIAVK EIGRDLYRGL PTEERIQKLE FMLDKLQNEI ENSBTAP00000015152/1-1154 GIKLVRKEGG LDDSVFIAVK EIGRDLYRGL PTEERIQKLE FMLDKLQNEI bmy_08171T0/1-813 GIKLVRKEGG LDDSVFIAVK EIGRDLYRGL PTEERIQKLE FMLDKLQNEI BACU004689/1-800 GIKLVRKEGG LDDSVFIAVK EIGRDLYRGL PTEERIQKLE FMLDKLQNEI 1051 1100 ENSTTRP00000004981/1-1151 DQELEHNNSL VREEKETTDT RKKSLLSAAL AKSGERLQAL TLLMIHYRAG ENSP00000334642/1-1154 DQELEHNNSL VREEKETTDT RKKSLLSAAL AKSGERLQAL TLLMIHYRAG ENSBTAP00000015152/1-1154 DQELEHNNSL VREEKETTDT RKKSLLSASL AKSGERLQAL TLLMIHYRAG bmy_08171T0/1-813 DQELEHNNTL VREEKETTDT RKKSLLSAAL AKSGERLQAL TLLMIHYRAG BACU004689/1-800 DQELEHNNTL VREEKETTDA RKKSLLSAAL AKSGERLQAL TLLMIHYRAG 1101 1150 ENSTTRP00000004981/1-1151 IEDIESLESL SLDQHSKKIS KYTDDTEEDL -DSEITQLID SQPFSSISDD ENSP00000334642/1-1154 IEDIETLESL SLDQHSKKIS KYTDDTEEDL -DNEISQLID SQPFSSISDD ENSBTAP00000015152/1-1154 IEDIESLESL SLDQHSKKIS KYTDDTEEDL -DSEITQLID SQPFSSISDD bmy_08171T0/1-813 IEDIESLESL SLDQHSKKIS KYTDDTEEDL DDSEITQLID SQPFSSISDD BACU004689/1-800 IEDIESLESL SLDQHSKKIS KYTDDTEEDL DDSEITQLID SQPFSSISDD 1151 1200 ENSTTRP00000004981/1-1151 LFGPSESV ENSP00000334642/1-1154 LFGPSESV ENSBTAP00000015152/1-1154 LFGPSESV bmy_08171T0/1-813 LFGPSESV BACU004689/1-800 LFGPSESV