KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:46 2014 Check: 00 .. Name: ENSP00000414350/1-709 Len: 748 Check: 4685 Weight: 1.00 Name: ENSBTAP00000015160/1-521 Len: 748 Check: 3557 Weight: 1.00 Name: ENSTTRP00000015435/1-455 Len: 748 Check: 2172 Weight: 1.00 Name: bmy_02322T0/1-296 Len: 748 Check: 6432 Weight: 1.00 Name: BACU003819/1-363 Len: 748 Check: 4794 Weight: 1.00 // 1 50 ENSP00000414350/1-709 --------MG CLWGLALPLF FFCWEVGVSG SSAGPSTRRA D--------- ENSBTAP00000015160/1-521 MVAGIPATMS FLWCLALPLF FCCWEAGAHR SSAANTGPSG SGHTELPAVT ENSTTRP00000015435/1-455 ---------- ---------- ---------- ---------- ---------- bmy_02322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU003819/1-363 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000414350/1-709 ---------- -TAMTTDDTE VPAMTLAPGH AALETQTLSA ETSSRASTPA ENSBTAP00000015160/1-521 PEATVTPEVW TSSEEVFQAT DLIEPSVSNH ISWETQTLST QTSDKTFIRG ENSTTRP00000015435/1-455 ---------- ---VPADDSE GLTETSMSNH VSLETQTLST QTSDTTFLPG bmy_02322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU003819/1-363 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000414350/1-709 GPIPEAETRG AKRISPARET RSFTKTSPNF MVLIATSVET SAASGSPEGA ENSBTAP00000015160/1-521 GTISEAEARE DKTMAL---- --MTRKPSKF TAVITTPTVT SSTGGSPTGR ENSTTRP00000015435/1-455 STISVAENRE NKTMAL---- --IKIMPSKS SAVITTPMET SATSGSPTGR bmy_02322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU003819/1-363 ---------- ---------- ---------- -------MET SATSGSPTGR 151 200 ENSP00000414350/1-709 GMTTVQTITG SDPREAIFDT LCTDDSSEEA KTLTMDILTL AHTSTEAKGL ENSBTAP00000015160/1-521 VRTTVDTVTG SELWKVVFEN LCTFDSSEEA KRI----LKF IHTSGETEAL ENSTTRP00000015435/1-455 GMTTVETVTG TELSKAAFDT LCNFDSSEEA KRIMVDFLKL AHTATEAEAL bmy_02322T0/1-296 --MALQVV-- --LRKENPPK PCQKQSRLDA EH-------- ---------- BACU003819/1-363 GMTTVETVTG TELSKAAFDT LCNFGSSEEA KRIMVDFLKL AHTSTEAEAL 201 250 ENSP00000414350/1-709 SSESSASSDS PHPVITPSRA SESSASSDGP HPVITPSRAS ESSASSDGPH ENSBTAP00000015160/1-521 SSESSASSES SVPAITTSQA ---------- ---------- ---------- ENSTTRP00000015435/1-455 SSESSASSDS SVPAITASQA ---------- ---------- ---------- bmy_02322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU003819/1-363 SSESSASSDS SVPAITTSQA ---------- ---------- ---------- 251 300 ENSP00000414350/1-709 PVITPSRASE SSASSDGPHP VITPSRASES SASSDGPHPV ITPSRASESS ENSBTAP00000015160/1-521 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015435/1-455 ---------- ---------- ---------- ---------- ---------- bmy_02322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU003819/1-363 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000414350/1-709 ASSDGPHPVI TPSRASESSA SSDGPHPVIT PSRASESSAS SDGPHPVITP ENSBTAP00000015160/1-521 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015435/1-455 ---------- ---------- ---------- ---------- ---------- bmy_02322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU003819/1-363 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000414350/1-709 SRASESSASS DGPHPVITPS RASESSASSD GLHPVITPSR ASESSASSDG ENSBTAP00000015160/1-521 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015435/1-455 ---------- ---------- ---------- ---------- ---------- bmy_02322T0/1-296 ---------- ---------- ---------- ---------- ---------- BACU003819/1-363 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000414350/1-709 PHPVITPSRA SESSASSDGP HPVITPSWSP GSDVTLLAEA LVT--VTNIE ENSBTAP00000015160/1-521 ---------- ---------- ---------L SADITALTKA LVTY-ITNIK ENSTTRP00000015435/1-455 ---------- ---------- ---------L SPDIAALAKA LVTYNISNIE bmy_02322T0/1-296 ---------- ---------- ---------- ---------A LVTYSISNIE BACU003819/1-363 ---------- ---------- ---------L SPDIAALVKA LVTYSISNIE 451 500 ENSP00000414350/1-709 VINCSITEIE TTTSSIPGAS DTDLIPTEGV KASSTSDPPA LPDSTEAKPH ENSBTAP00000015160/1-521 VINCRVMETE -PTAAIPGTS HIDYSSSGG- QALSPTERSA LPDSTEAKSH ENSTTRP00000015435/1-455 VIDCSVTEME -ATASTPETS DTDRSPTRG- KALSTPETSA LPDSTEAKSH bmy_02322T0/1-296 VINCSVIEIE -AAASVPGTS DIDRSPTGG- KALSTPETSA LPDSTEAKSH BACU003819/1-363 VINCSVIEIE -ATASIPGTS DIDHSPTGG- KALSTPETSA LPDSTEVTSH 501 550 ENSP00000414350/1-709 ITEVTASAET LSTAGTTESA APDATVGTPL PTNSATEREV TAPGATTLSG ENSBTAP00000015160/1-521 LTRNTTSAET WTIAHATKLV TPVVT----V ILSSTPEKET TAAKATTPSG ENSTTRP00000015435/1-455 LARTTASAET LSAASATESA APDIT----L TISSTTEMET TAARATAPSG bmy_02322T0/1-296 LARTTTSAET LSTASTTESA TPDIT----L TINSTTEMET TAAKATAPSG BACU003819/1-363 LARTTTSAET LSTASTTESA TPDIT----L TINSTTEMET TAAKATAPSG 551 600 ENSP00000414350/1-709 ALVTVSRNPL EETSALSVET PSYVKVSGAA PVSIEAGSAV GKTTSFAGSS ENSBTAP00000015160/1-521 TLVTVSKNLL EESSALSVET TSDISISGII PVFTEDATIV SKVTSPAGFS ENSTTRP00000015435/1-455 NLVTVSVNLL EENSSLSVET TSHTEVSGAV TISTGTASTV GEVTSPAGFS bmy_02322T0/1-296 NLVTVSMNLL EENSSLSVET TSHTEVSGAV TISTGTASTA GKVTSPVGFS BACU003819/1-363 TLVTVSMNLL EENSSLSVET TSHTEVSGAV TISTGTASTA GKVTSPVRFS 601 650 ENSP00000414350/1-709 ASSYSPSE-A ALKNFTPSET PTMDIATKGP FPT-SRDPLP SVPPTTTNSS ENSBTAP00000015160/1-521 AMVYSFSEET STTSSTSSET SATHTTPSGP IPPISRSSLP SFHLSMVDSI ENSTTRP00000015435/1-455 ATVYSLSEVT TIMSSTPSET STTDITFSAP APN-SRSPLP SVHPATANSS bmy_02322T0/1-296 ATVYSLSEVT TIMSSTPSET STTDITFSVP VPN-SRSPLP SVHLATANSS BACU003819/1-363 ASVYSLSEVT TIMSSTPSET STTDITFSAP VPN-SRSPLP SVHLATANSS 651 700 ENSP00000414350/1-709 RGTNSTLAKI TTSAKTTM-- -----KPPTA TPTTARTRPT TDVSAGENGG ENSBTAP00000015160/1-521 PETSVTSAKT TDSAKTLKTA SAGGGKPSTT SASTARTR-W THITPGADGG ENSTTRP00000015435/1-455 QETNITLAKT TASAKTLR-- -----KPSTA TPTSAQTS-L TDVTAGEDGG bmy_02322T0/1-296 QETNITLAKX TASXKTLKIA STAGGKPSTA MPTSAQXS-L TDVTAGE--- BACU003819/1-363 QETNITLAKT TASAKALKIA STAGGKPSTA TPTSAQTS-L TDVTAGE--- 701 750 ENSP00000414350/1-709 FLLLRLSVAS PEDLTDPRVA ERLMQQLHRE LHAHAPHFQV SLLRVRRG ENSBTAP00000015160/1-521 FLLLRLNVAS PEDLTDPSVA ERLMHQISRK LDMLAFPVQV SLLRVRSG ENSTTRP00000015435/1-455 FFLLRLSVAS SKDLTAPRVA ERLMQQLHRK LHMFMSPIQV SLLRVRRG bmy_02322T0/1-296 ----RLP--- ------PCV- --IFGDLG-- -------FGV CMFKE--- BACU003819/1-363 ----RLT--- ------PCV- --IFGDLG-- -------FGI CMFKE---