KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:50 2014 Check: 00 .. Name: ENSTTRP00000002899/1-726 Len: 747 Check: 531 Weight: 1.00 Name: ENSP00000273783/1-721 Len: 747 Check: 3669 Weight: 1.00 Name: ENSBTAP00000015168/1-728 Len: 747 Check: 4882 Weight: 1.00 Name: bmy_10429T0/1-741 Len: 747 Check: 4169 Weight: 1.00 Name: BACU016578/1-726 Len: 747 Check: 6336 Weight: 1.00 // 1 50 ENSTTRP00000002899/1-726 MAASVVVPPD VVAGRPNKRS GSGP--AGGG SGGGGGGAAR GAEEEQPPPL ENSP00000273783/1-721 MAAPVVAPPG VVVSRANKRS GAGP------ -GGSGGGGAR GAEEEPPPPL ENSBTAP00000015168/1-728 MAATVVAPPG ALASRVNKRS GGGPGGGGGG GGGGGGGAAR GAEEEPPPPL bmy_10429T0/1-741 MAATVVAPPG VVAGRANKRS GGGP--AGGG SGGGGGGAAR GAEEEPPPPL BACU016578/1-726 MAATVVAPPG VVAGRPNKRS GSGP--AGGG SGGGGGGAAR GAEEEPPPPL 51 100 ENSTTRP00000002899/1-726 QAVLVADSFN RRFFPISKDQ PRVLLPLANV ALIDYTLEFL TATGVQETFV ENSP00000273783/1-721 QAVLVADSFD RRFFPISKDQ PRVLLPLANV ALIDYTLEFL TATGVQETFV ENSBTAP00000015168/1-728 QAVLVADSFN RRFFPISKDQ PRVLLPLANV ALIDYTLEFL TATGVQETFV bmy_10429T0/1-741 QAVLVADSFN RRFFPISKDQ PRVLLPLANV ALIDYTLEFL TATGVQETFV BACU016578/1-726 QAVLVADSFN RRFFPISKDQ PRVLLPLANV ALIDYTLEFL TATGVQETFV 101 150 ENSTTRP00000002899/1-726 FCCWKAAQIK EHLLKSKWCR PTSLNVVRII TSELYRSLGD ILRDVDAKAL ENSP00000273783/1-721 FCCWKAAQIK EHLLKSKWCR PTSLNVVRII TSELYRSLGD VLRDVDAKAL ENSBTAP00000015168/1-728 FCCWKAAQIK EHLLKSKWCR PTSLNVVRII TSELYRSLGD VLRDVDAKAL bmy_10429T0/1-741 FCCWKAAQIK EHLLKSKWCR PTSLNVVRII TSELYRSLGD ILRDVDAKAL BACU016578/1-726 FCCWKAAQIK EHLLKSKWCR PTSLNVVRII TSELYRSLGD VLRDVDAKAL 151 200 ENSTTRP00000002899/1-726 VRSDFLLVYG DVISNINITR ALEEHRLRRK LEKNVSVMTM IFKESSPSHP ENSP00000273783/1-721 VRSDFLLVYG DVISNINITR ALEEHRLRRK LEKNVSVMTM IFKESSPSHP ENSBTAP00000015168/1-728 VRSDFLLVYG DVISNINITR ALEEHRLRRK LEKNVSVMTM IFKESSPSHP bmy_10429T0/1-741 VRSDFLLVYG DVISNINITR ALEEHRLRRK LEKNVSVMTM IFKESSPSHP BACU016578/1-726 VRSDFLLVYG DVISNINITR ALEEHRLRRK LEKNVSVMTM IFKESSPSHP 201 250 ENSTTRP00000002899/1-726 TRCHEDNVVV AVDSATNRVL HFQKTQGLRR FSFPLSLFQG SGDGVEIRYD ENSP00000273783/1-721 TRCHEDNVVV AVDSTTNRVL HFQKTQGLRR FAFPLSLFQG SSDGVEVRYD ENSBTAP00000015168/1-728 TRCHEDNVVV AVDSATNQVL HFQKTQGLRR FSFPLSLFQG SGDGVEIRYD bmy_10429T0/1-741 TRCHDDNVVV AVDSATNQVL HFQKTQGLRR FSFPL----G SGDGVEIRYD BACU016578/1-726 TRCHEDNVVV AVDSATNRVL HFQKTQGLRR FPFLLSLFQG SGDGVEIRYD 251 300 ENSTTRP00000002899/1-726 LLDCHISICS PQVAQLFTDN FDYQTRDDFV RGLLVNEEIL GNQIHMHVTT ENSP00000273783/1-721 LLDCHISICS PQVAQLFTDN FDYQTRDDFV RGLLVNEEIL GNQIHMHVTA ENSBTAP00000015168/1-728 LLDCHISICS PQVAQLFTDN FDYQTRDDFV RGLLVNEEIL GNQIHMHVTT bmy_10429T0/1-741 LLDCHISICS PQVAQLFTDN FDYQTRDDFV RGLLVNEEIL GNQIHMHVTT BACU016578/1-726 LLDCHISICS PQVAQLFTDN FDYQTRDDFV RGLLVNEEIL GNQIHMHVTT 301 350 ENSTTRP00000002899/1-726 KEYGARVSNL HMYAAICADV IRRWVYPLTP EANFTDSTTQ SCTHSRHNIY ENSP00000273783/1-721 KEYGARVSNL HMYSAVCADV IRRWVYPLTP EANFTDSTTQ SCTHSRHNIY ENSBTAP00000015168/1-728 KEYGARVSNL HMYAAVCADV IRRWVYPLTP EANFTDSTTQ SCTHSRHNIY bmy_10429T0/1-741 KEYGARVSNL HMYAAVCADV IRRWVYPLTP EANFTDSTTQ SCTHSRHNIY BACU016578/1-726 KEYGARVSNL HMYAAICADV IRRWVYPLTP EANFTDSTTQ SCTHSRHNIY 351 400 ENSTTRP00000002899/1-726 RGPEVSLGHG SILEENVLLG SGTVIGSNCS ITNSVIGPGC HIGDNVVLDE ENSP00000273783/1-721 RGPEVSLGHG SILEENVLLG SGTVIGSNCF ITNSVIGPGC HIGDNVVLDQ ENSBTAP00000015168/1-728 RGPEVSLGHG SILEENVLLG SGTVIGSNCS ITNSVIGPGC HIGDNVVLDQ bmy_10429T0/1-741 RGPEVSLGHG SILEENVLLG SGTVIGSNCS ITNSVIGPGC HIGDNVVLDE BACU016578/1-726 RGPEVSLGHG SILEENVLLG SGTVIGSNCS ITNSVIGPGC HIGDNVVLDE 401 450 ENSTTRP00000002899/1-726 AFLWQGVRVA AGAQIRQSVL CDNAEVKEKV ILKPRCVLTS QVVVGPDITL ENSP00000273783/1-721 TYLWQGVRVA AGAQIHQSLL CDNAEVKERV TLKPRSVLTS QVVVGPNITL ENSBTAP00000015168/1-728 AFLWQGVRVA AGAQIHQSLL CDNAEVKENV TLKPHCVLTS QVVVGPDIML bmy_10429T0/1-741 AFLWQGVRVA AGAQIRQSVL CDNAEVKEKV ILKPRCVLTS QVVVGPDITL BACU016578/1-726 AFLWQGVRVA AGAQIRQSVL CDNAEVKEKV ILKPRCVLTS QVVVGPDITL 451 500 ENSTTRP00000002899/1-726 PEGXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000273783/1-721 PEGSVISLHP PDAEEDEDDG EFSDDSGADQ EKDKVKMKGY NPAEVGAAGK ENSBTAP00000015168/1-728 PEGSVISLHP PDAEDDEDDG QFSDDSGADQ EKEKMKLKGY NPAEVGVAGQ bmy_10429T0/1-741 PEGSVISLHP PDAEDDEDDG QFSDDSGADQ EKEKVKLKGY NRAEVGVAGQ BACU016578/1-726 PEGSVISLHP PDAEDDEDDG QFSDDSGADQ EKEKVKLKGY NPAEVGVAGQ 501 550 ENSTTRP00000002899/1-726 XXXXXXXXXX XXXXXXXXXX XXXLKINMEE ESETESERSM DSEELDSRAG ENSP00000273783/1-721 GYLWKAAGMN MEEEEELQQN LWGLKINMEE ESESESEQSM DSEEPDSRGG ENSBTAP00000015168/1-728 GYLWKAADMN MKEEEELRQN LWGLKINMEE ESETESERSM DSEELDSRAG bmy_10429T0/1-741 GYLWKTADMN MEEEEELRQN LWGLKINMEE ESETESERSM DSEELDSRAG BACU016578/1-726 GYLWKTADMN MEEEEELRQN LWGLKINMEE ESDTESERSM DSEELDSRAG 551 600 ENSTTRP00000002899/1-726 SPQMDDIK-- ---------- -------VFQ NEVLGTLQRG KEENISCDNL ENSP00000273783/1-721 SPQMDDIK-- ---------- -------VFQ NEVLGTLQRG KEENISCDNL ENSBTAP00000015168/1-728 SPQMDDIK-- ---------- -------VFQ NEVLGTLQRG KEENISCDNL bmy_10429T0/1-741 SPQMDDIKGK WPGEQCLGQK RKTSSLVVFQ NEVLGTLQRG KEENISCDNL BACU016578/1-726 SPQMDDIK-- ---------- -------VFQ NEVLGTLQRG KEENISWDNL 601 650 ENSTTRP00000002899/1-726 VLEINSLKYA YNISLKEVMQ VLSHVVLEFP LQHMDSPLDP NRYCALLIPL ENSP00000273783/1-721 VLEINSLKYA YNISLKEVMQ VLSHVVLEFP LQQMDSPLDS SRYCALLLPL ENSBTAP00000015168/1-728 VLEINSLKYA YNISLKEVMQ VLSHVVLEFP LQQMDSPLDP NRYCTLLIPL bmy_10429T0/1-741 VLEINSLKYA YNISLKEVMQ VLSHVVLEFP LQHTDSPLDP NHYCALLIPL BACU016578/1-726 VLEINSLKYA YNISLKEVMQ VLSHVVLEFP LQHTDSPLDP NRYCALLIPL 651 700 ENSTTRP00000002899/1-726 LKTWSPVFRN YIKRAADHLE ALAAIEDFFL EHEALSTSMA KVLMAFYQLE ENSP00000273783/1-721 LKAWSPVFRN YIKRAADHLE ALAAIEDFFL EHEALGISMA KVLMAFYQLE ENSBTAP00000015168/1-728 LKAWSPVFRN YIKRAADHLE SLAAIEDFFL EHEALSTSMA KVLMAFYQLE bmy_10429T0/1-741 LKTWSPVFRN YIKRAADHLE ALAAIEDFFL EHEALSTSMA KVLMAFYQLE BACU016578/1-726 LKTWSPVFRN YIKRAADHLE ALAAIEDFFL EHEALSTSMA KVLMAFYQLE 701 750 ENSTTRP00000002899/1-726 ILAEETILSW FSQMDTTDKG RQLRKNQQLQ RFIQWLKEAE EESSEDD ENSP00000273783/1-721 ILAEETILSW FSQRDTTDKG QQLRKNQQLQ RFIQWLKEAE EESSEDD ENSBTAP00000015168/1-728 ILAEETILSW FSRREVTDKG QQLRKNQQLQ RFIQWLKEAE EESSEDD bmy_10429T0/1-741 ILAEETILSW FSQRDTTDKG RQLRKNQQLQ RFIQWLKEAE EESSEDD BACU016578/1-726 ILAEETILSW FSQRDTTDKG RQLHKNQQLQ RFIQWLKEAE EESSEDD