KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:51 2014 Check: 00 .. Name: ENSP00000297185/1-679 Len: 687 Check: 303 Weight: 1.00 Name: ENSBTAP00000015172/1-679 Len: 687 Check: 9771 Weight: 1.00 Name: ENSTTRP00000005205/1-679 Len: 687 Check: 9183 Weight: 1.00 Name: BACU004110/1-505 Len: 687 Check: 1995 Weight: 1.00 Name: bmy_12142T0/1-673 Len: 687 Check: 7310 Weight: 1.00 // 1 50 ENSP00000297185/1-679 MISASRAAAA RLVGAAASRG PTAARH-QDS WNGLSHEAFR LVSRRDYASE ENSBTAP00000015172/1-679 MISASRAAVS RFVGTAASRG PTAARH-QDG WNGLSHEAFR IVSRRDYASE ENSTTRP00000005205/1-679 MISASRAAVA RLVGAAASRG PPAARH-QDG WNGFSHEAFR IVSRRDYASE BACU004110/1-505 ---MPRSVLA --IG------ PDSGNSVQDG WNGFSHEAFR IVSRRDYASE bmy_12142T0/1-673 MISASRAAVA RLVGAAASRG PTAARH-QDG WNGFSHEAFR IVSRRDYASE 51 100 ENSP00000297185/1-679 AIKGAVVGID LGTTNSCVAV MEGKQAKVLE NAEGARTTPS VVAFTADGER ENSBTAP00000015172/1-679 AIKGAVVGID LGTTNSCVAV MEGKQAKVLE NAEGARTTPS VVAFTADGER ENSTTRP00000005205/1-679 AIKGAVVGID LGTTNSCVAV MEGKQAKVLE NVEGARTTPS VVAFTADGER BACU004110/1-505 AIKGAVVGID LGTTNSCVAV MEGKQAK--- ---------- ---------- bmy_12142T0/1-673 AIKGAVVGID LGTTNSCVAV MEGKQAKVLE NAEGARTTPS VVAFTADGER 101 150 ENSP00000297185/1-679 LVGMPAKRQA VTNPNNTFYA TKRLIGRRYD DPEVQKDIKN VPFKIVRASN ENSBTAP00000015172/1-679 LVGMPAKRQA VTNPNNTFYA TKRLIGRRYD DPEVQKDIKN VPFKIVRASN ENSTTRP00000005205/1-679 LVGMPAKRQA VTNPNNTFYA TKRLIGRRYD DPEVQKDIKN VPFKIVRASN BACU004110/1-505 ---------- ---------- ---------- ---------- ---------- bmy_12142T0/1-673 LVGMPAKRQA VTNPNNTFYA TKRLIGRRYD DPEVQKDIKN VPFKIVRASN 151 200 ENSP00000297185/1-679 GDAWVEAHGK LYSPSQIGAF VLMKMKETAE NYLGHTAKNA VITVPAYFND ENSBTAP00000015172/1-679 GDAWVEAHGK LYSPSQIGAF VLMKMKETAE NYLGHTAKNA VITVPAYFND ENSTTRP00000005205/1-679 GDAWVEAHGK LYSPSQIGAF VLMKMKETAE NYLGHTAKNA VITVPAYFND BACU004110/1-505 ---------- ---------- ---------- ---------- ---------- bmy_12142T0/1-673 GDAWVEAHGK LYSPSQIGAF VLMKMKETAE G----KSKDY TLSFC----- 201 250 ENSP00000297185/1-679 SQRQATKDAG QISGLNVLRV INEPTAAALA YGLDKSEDKV IAVYDLGGGT ENSBTAP00000015172/1-679 SQRQATKDAG QISGLNVLRV INEPTAAALA YGLDKSEDKI IAVYDLGGGT ENSTTRP00000005205/1-679 SQRQATKDAG QISGLNVLRV INEPTAAALA YGLDKSEDKI IAVYDLGGGT BACU004110/1-505 ----ATKDAG QISGLNVLRV INEPTAAALA YGLDKSEDKI IAVYDLGGGT bmy_12142T0/1-673 ----ATKDAG QISGLNVLRV INEPTAAALA YGLDKSEDRI IAVYDLGGGT 251 300 ENSP00000297185/1-679 FDISILEIQK GVFEVKSTNG DTFLGGEDFD QALLRHIVKE FKRETGVDLT ENSBTAP00000015172/1-679 FDISILEIQK GVFEVKSTNG DTFLGGEDFD QALLRHIVKE FKRETGVDLT ENSTTRP00000005205/1-679 FDISILEIQK GVFEVKSTNG DTFLGGEDFD QALLRHIVKE XXXXTGVDLT BACU004110/1-505 FDISILEIQK GVFEVKSTNG DTFLGGEDFD QALLRHIVKE FKRETGVDLT bmy_12142T0/1-673 FDISILEIQK GVFEVKSTNG DTFLGGEDFD QALLRHIVKE FKRETGVDLT 301 350 ENSP00000297185/1-679 KDNMALQRVR EAAEKAKCEL SSSVQTDINL PYLTMDSSGP KHLNMKLTRA ENSBTAP00000015172/1-679 KDNMALQRVR EAAEKAKCEL SSSVQTDINL PYLTMDASGP KHLNMKLTRA ENSTTRP00000005205/1-679 KDNMALQRVR EAAEKAKCEL SSSVQTDINL PYLTMDASGP KHLNMKLTRA BACU004110/1-505 KDNMALQRVR EAAEKAKCEL SSSVQTDINL PYLTMDASGP KHLNMKLTRA bmy_12142T0/1-673 KDNMALQRVR EAAEKAKCEL SSSVQTDINL PYLTMDASGP KHLNMKLTRA 351 400 ENSP00000297185/1-679 QFEGIVTDLI RRTIAPCQKA MQDAEVSKSD IGEVILVGGM TRMPKVQQTV ENSBTAP00000015172/1-679 QFEGIVTDLI RRTIAPCQKA MQDAEVSKSD IGEVILVGGM TRMPKVQQTV ENSTTRP00000005205/1-679 QFEGIVTDLI KRTIAPCQKA MQDAEVSKSD IGEVILVGGM TRMPKVQQTV BACU004110/1-505 QFEGIVTDLI RRTIAPCQKA MQDAEVSKSD IGEVILVGGM TRMPK--QTV bmy_12142T0/1-673 QFEGIVTDLI RRTIAPCQKA MQDAEVSKSD IGEVILVGGM TRMPKVQQTV 401 450 ENSP00000297185/1-679 QDLFGRAPSK AVNPDEAVAI GAAIQGGVLA GDVTDVLLLD VTPLSLGIET ENSBTAP00000015172/1-679 QDLFGRAPSK AVNPDEAVAI GAAIQGGVLA GDVTDVLLLD VTPLSLGIET ENSTTRP00000005205/1-679 QDLFGRAPSK AVNPDEAVAI GAAIQGGVLA GDVTDVLLLD VTPLSLGIET BACU004110/1-505 QDLFGRAPSK AVNPDEAVAI GAAIQGGVLA GDVTDVLLLD VTPLSLGIET bmy_12142T0/1-673 QDLFGRAPSK AVNPDEAVAI GAAIQGGVLA GDVTDVLLLD VTPLSLGIET 451 500 ENSP00000297185/1-679 LGGVFTKLIN RNTTIPTKKS QVFSTAADGQ TQVEIKVCQG EREMAGDNKL ENSBTAP00000015172/1-679 LGGVFTKLIN RNTTIPTKKS QVFSTAADGQ TQVEIKVCQG EREMAGDNKL ENSTTRP00000005205/1-679 LGGVFTKLIN RNTTIPTKKS QVFSTAADGQ TQVEIKVCQG EREMAGDNKL BACU004110/1-505 LGGVFTKLIN RNTTIPTKKS Q--------- ---------- ---------- bmy_12142T0/1-673 LGGVFTKLIN RNTTIPTKKS QVFSTAADGQ TQVEIKVCQG EREMAGDNKL 501 550 ENSP00000297185/1-679 LGQFTLIGIP PAPRGVPQIE VTFDIDANGI VHVSAKDKGT GREQQI---- ENSBTAP00000015172/1-679 LGQFTLIGIP PAPRGVPQIE VTFDIDANGI VHVSAKDKGT GREQQI---- ENSTTRP00000005205/1-679 LGQFTLIGIP PAPRGVPQIE VTFDIDANGI VHVSAKDKGT GREQQI---- BACU004110/1-505 ------IGIP PAPRGVPQIE VTFDIDANGI VHVSAKDKGT GREQQI---- bmy_12142T0/1-673 LGQFTLIGIP PAPRGVPQIE VTFDIDANGI VHVSAKDKGT GREQQIISVT 551 600 ENSP00000297185/1-679 ---VIQSSGG LSKDDIENMV KNAEKYAEED RRKKERVEAV NMAEGIIHDT ENSBTAP00000015172/1-679 ---VIQSSGG LSKDDIENMV KNAEKYAEED RRKKERVEAV NMAEGIIHDT ENSTTRP00000005205/1-679 ---VIQSSGG LSKDDIENMV KNAEKYAEED RRKKERVEAV NMAEGIIHDT BACU004110/1-505 ---VIQSSGG LSKDDIENMV KNAEKYAEED RRKKERVEAV NMAEGIIHDT bmy_12142T0/1-673 LTVVIQSSGG LSKDDIENMV KNAEKYAEED RRKKERVEAV NMAEGIIHDT 601 650 ENSP00000297185/1-679 ETKMEEFKDQ LPADECNKLK EEISKMRELL ARKDSETGEN IRQAASSLQQ ENSBTAP00000015172/1-679 ETKMEEFKDQ LPADECNKLK EEISKMRELL ARKDSETGEN IRQAASSLQQ ENSTTRP00000005205/1-679 ETKMEEFKDQ LPADECHKLK EEISKMRELL ARKDSETGEN IRQAASSLQQ BACU004110/1-505 ETKMEEFKDQ LPADECHKLK EEISKMRELL ARKDSETGQN IRQAASSLQQ bmy_12142T0/1-673 ETKMEEFKDQ LPADECHKLK EEISKMRELL ARKDSETGQN IREAASSLQQ 651 700 ENSP00000297185/1-679 ASLKLFEMAY KKMASEREGS GSSGTGEQKE DQKEEKQ ENSBTAP00000015172/1-679 ASLKLFEMAY KKMASEREGS GSSGTGEQKD NQKEEKQ ENSTTRP00000005205/1-679 ASLKLFEMAY KKMASEREGS GSSGTGEQKE DQKEEKQ BACU004110/1-505 ASLKLFEMAY KKMASEREGS GSSGTGEQKE DQKEEKQ bmy_12142T0/1-673 ASLKLFEMAY KKMASEREGS GSSGTGEQKE DQKEEKQ