KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:53 2014 Check: 00 .. Name: ENSTTRP00000011330/1-799 Len: 818 Check: 761 Weight: 1.00 Name: ENSP00000369756/1-802 Len: 818 Check: 6970 Weight: 1.00 Name: ENSBTAP00000015189/1-803 Len: 818 Check: 2449 Weight: 1.00 Name: BACU016881/1-802 Len: 818 Check: 1606 Weight: 1.00 Name: bmy_07662T0/1-476 Len: 818 Check: 7828 Weight: 1.00 // 1 50 ENSTTRP00000011330/1-799 --MDSWFLLV LLGSGLIHVG ANNTTIVSPS VGVTTSIKAS TAESLKEETK ENSP00000369756/1-802 --MDSWFILV LLGSGLICVS ANNATTVAPS VGITRLINSS TAEPVKEEAK ENSBTAP00000015189/1-803 VSMDSWFLLT LLGSGLIHVG ASNTTTVSPS VGVTRSVKAS TTESLKEETK BACU016881/1-802 --MDSWFLLV LLGSGLIHVG ANNTTIVSPS VGVTRSTKAS TAESLKEETK bmy_07662T0/1-476 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011330/1-799 TSNPTSSVTS PSLAPTSSPS LTLGPTYVTT VNSSDSDNGT TRTVSTNSVV ENSP00000369756/1-802 TSNPTSSLTS LSVAPTFSPN ITLGPTYLTT VNSSDSDNGT TRTASTNSIG ENSBTAP00000015189/1-803 TSNPTPSVTS -SLTPTFSPN LTLGPVYVTT VNSSDSDNGT TRTVSTNSVV BACU016881/1-802 TSNPTSSVTS PSLAPTFSPS LTLGPTYVTT VNSSDSDNGT TRTVSTNSVV bmy_07662T0/1-476 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000011330/1-799 TAVSPNGTWL PDNQFTDTRT EPWEGNASTA ATTPETFPPS ---------D ENSP00000369756/1-802 ITISPNGTWL PDNQFTDART EPWEGNSSTA ATTPETFPPS GNSDSKDRRD ENSBTAP00000015189/1-803 TTISPNGTWL PDNQFTDTRT EPWEGNASTA ATTPETFPPS GNSDSKDRRD BACU016881/1-802 TAVSPNGTWL PDNQFTDTRT EPWEGNASTA ATTPETFPPS GNSDSKDRRD bmy_07662T0/1-476 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000011330/1-799 ETPIIAVMVA LSSLLVIVFI IIVLYMLRIF KAESVSGATK KYKQAGSHSN ENSP00000369756/1-802 ETPIIAVMVA LSSLLVIVFI IIVLYMLRF- ---------K KYKQAGSHSN ENSBTAP00000015189/1-803 ETPIIAVMVA LSSLLVIVFI IIVLYMLRF- ---------K KYKQAGSHSN BACU016881/1-802 ETPIIAVMVA LSSLLVIVFI IIVLYMLRF- ---------K KYKQAGSHSN bmy_07662T0/1-476 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000011330/1-799 SFRLSNGRTE DVEPQSVPLL ARSPSTNRKY PPLPVDKLEE EINRRMADDN ENSP00000369756/1-802 SFRLSNGRTE DVEPQSVPLL ARSPSTNRKY PPLPVDKLEE EINRRMADDN ENSBTAP00000015189/1-803 SFRLSNGRTE DVEPQSVPLL ARSPSTNRKY PPLPVDKLEE EINRRMADDN BACU016881/1-802 SFRLSNGRTE DVEPQSVPLL ARSPSTNRKY PPLPVDKLEE EINRRMADDN bmy_07662T0/1-476 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000011330/1-799 KLFREEFNAL PACPIQATCE AASKEENKEK NRYVNILPYD -SRVHLTPVE ENSP00000369756/1-802 KLFREEFNAL PACPIQATCE AASKEENKEK NRYVNILPYD HSRVHLTPVE ENSBTAP00000015189/1-803 KLFREEFNAL PACPIQATCE AASKEENKEK NRYVNILPYD HSRVHLTPVE BACU016881/1-802 KLFREEFNAL PACPIQATCE AASKEENKEK NRYVNILPYD HSRVHLTPVE bmy_07662T0/1-476 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000011330/1-799 GVPDSDYINA SFINGYQEKN KFIAAQGPKE ETVNDFWRMI WEQNTATIVM ENSP00000369756/1-802 GVPDSDYINA SFINGYQEKN KFIAAQGPKE ETVNDFWRMI WEQNTATIVM ENSBTAP00000015189/1-803 GVPDSDYINA SFINGYQEKN KFIAAQGPKE ETVNDFWRMI WEQNTATIVM BACU016881/1-802 GVPDSDYINA SFINGYQEKN KFIAAQGPKE ETVNDFWRMI WEQNTATIVM bmy_07662T0/1-476 ---------- ---------- ---------- --------MI WEQNTATIVM 351 400 ENSTTRP00000011330/1-799 VTNLKERKEX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV ENSP00000369756/1-802 VTNLKERKEC KCAQYWPDQG CWTYGNIRVS VEDVTVLVDY TVRKFCIQQV ENSBTAP00000015189/1-803 VTNLKERKEC KCAQYWPDQG CWTYGNIRVS VEDVTVLVDY TVRKFCIQQV BACU016881/1-802 VTNLKERKEC KCAQYWPDQG CWTYGNIRVS VEDVTVLVDY TVRKFCIQQV bmy_07662T0/1-476 VTNLKERKEC KCAQYWPDQG CWTYGNIRVS VEDVTVLVDY TVRKFCIQQV 401 450 ENSTTRP00000011330/1-799 GDVTNRKPQR LITQFHFTSW PDFGVPFTPI GMLKFLKKVK ACNPQYAGAI ENSP00000369756/1-802 GDMTNRKPQR LITQFHFTSW PDFGVPFTPI GMLKFLKKVK ACNPQYAGAI ENSBTAP00000015189/1-803 GDVTNRKPQR LITQFHFTSW PDFGVPFTPI GMLKFLKKVK ACNPQYAGAI BACU016881/1-802 GDVTNRKPQR LITQFHFTSW PDFGVPFTPI GMLKFLKKVK ACNPQYAGAI bmy_07662T0/1-476 GDVTNRKPQR LITQFHFTSW PDFGVPFTPI GMLKFLKKVK ACNPQYAGAI 451 500 ENSTTRP00000011330/1-799 VVHCSAGVGR TGTFVVIDAM LDMMHTERKV DVYGFVSRIR AQRCQMVQTD ENSP00000369756/1-802 VVHCSAGVGR TGTFVVIDAM LDMMHTERKV DVYGFVSRIR AQRCQMVQTD ENSBTAP00000015189/1-803 VVHCSAGVGR TGTFVVIDAM LDMMHTERKV DVYGFVSRIR AQRCQMVQTD BACU016881/1-802 VVHCSAGVGR TGTFVVIDAM LDMMHTERKV DVYGFVSRIR AQRCQMVQTD bmy_07662T0/1-476 VVHCSAGVGR TGTFVVIDAM LDMMHTERKV DVYGFVSRIR AQRCQMVQTD 501 550 ENSTTRP00000011330/1-799 MQYVFIYQAL LEHYLYGDTE LEVTSLETHL QKIYNKIPGS SNNGLEEEFK ENSP00000369756/1-802 MQYVFIYQAL LEHYLYGDTE LEVTSLETHL QKIYNKIPGT SNNGLEEEFK ENSBTAP00000015189/1-803 MQYVFIYQAL LEHYLYGDTE LEVTSLETHL QKIYNKIPGT SNNGLEEEFK BACU016881/1-802 MQYVFIYQAL LEHYLYGDTE LEVTSLETHL QKIYNKIPGS SNNGLEEEFK bmy_07662T0/1-476 MQYVFIYQAL LEHYLYGDTE LEVTSLETHL QKIYNKIPGS SNNGLEEEFK 551 600 ENSTTRP00000011330/1-799 KLTSIKIQND KMRTGNLPAN MKKNRVLQII PYEFNRVIIP VKRGEENTDY ENSP00000369756/1-802 KLTSIKIQND KMRTGNLPAN MKKNRVLQII PYEFNRVIIP VKRGEENTDY ENSBTAP00000015189/1-803 KLTSIKIQND KMRTGNLPAN MKKNRVLQII PYEFNRVIIP VKRGEENTDY BACU016881/1-802 KLTSIKIQND KMRTGNLPAN MKKNRVLQII PYEFNRVIIP VKRGEENTDY bmy_07662T0/1-476 KLTSIKIQND KMRTGNLPAN MKKNRVLQII PYEFNRVIIP VKRGEENTDY 601 650 ENSTTRP00000011330/1-799 VNASFIDGYR QKDSYIASQG PLLHTIEDFW RMIWEWKSCS IVMLTELEER ENSP00000369756/1-802 VNASFIDGYR QKDSYIASQG PLLHTIEDFW RMIWEWKSCS IVMLTELEER ENSBTAP00000015189/1-803 VNASFIDGYR QKDSYIASQG PLFHTIEDFW RMIWEWKSCS IVMLTELEER BACU016881/1-802 VNASFIDGYR QKDSYIASQG PLLHTIEDFW RMIWEWKSCS IVMLTELEER bmy_07662T0/1-476 VNASFIDGYR QKDSYIASQG PLLHTIEDFW RMIWEWKSCS IVMLTELEER 651 700 ENSTTRP00000011330/1-799 GQEKCAQYWP SDGLVSYGDI TVELKKEEEC ESYTVRDLLV TNTRENKSRQ ENSP00000369756/1-802 GQEKCAQYWP SDGLVSYGDI TVELKKEEEC ESYTVRDLLV TNTRENKSRQ ENSBTAP00000015189/1-803 GQEKCAQYWP SDGLVSYGDI TVELKKEEEC ESYTVRDLLV TNTRENKSRQ BACU016881/1-802 GQEKCAQYWP SDGLVSYGDI TVELKKEEEC ESYTVRDLLV TNTRENKSRQ bmy_07662T0/1-476 GQEKCAQYWP SDGLVSYGDI TVELKKEEEC ESYTVRDLLV TNTRENKSRQ 701 750 ENSTTRP00000011330/1-799 IRQFHFHGWP EVGIPSDGKG MISIIAAVQK QQQQSGNHPI TVHCSAGAGR ENSP00000369756/1-802 IRQFHFHGWP EVGIPSDGKG MISIIAAVQK QQQQSGNHPI TVHCSAGAGR ENSBTAP00000015189/1-803 IRQFHFHGWP EVGIPSDGKG MISIIAAVQK QQQQSGNHPI TVHCSAGAGR BACU016881/1-802 IRQFHFHGWP EVGIPSDGKG MISIIAAVQK QQQQSGNHPI TVHCSAGAGR bmy_07662T0/1-476 IRQFHFHGWP EVGIPSDGKG MISIIAAVQK QQQQSGNHPI TVHCSAGAGR 751 800 ENSTTRP00000011330/1-799 TGTFCALSTV L-----EGIL DVFQTVKS-R LQRPHMVQTL EQYEFCYKEI ENSP00000369756/1-802 TGTFCALSTV LERVKAEGIL DVFQTVKSLR LQRPHMVQTL EQYEFCYKVV ENSBTAP00000015189/1-803 TGTFCALSTV LERVKAEGIL DVFQTVKSLR LQRPHMVQTL EQYEFCYKVV BACU016881/1-802 TGTFCALSTV LERVKAEGIL DVFQTVKSLR LQRPHMVQTL EQYEFCYKVV bmy_07662T0/1-476 TGTFCALSTV LERVKAEGIL DVFQTVKSLR LQRPHMVQTL EQYEFCYKVV 801 850 ENSTTRP00000011330/1-799 LEKECLDCYN N-VNFSHK ENSP00000369756/1-802 --QEYIDAFS DYANFK-- ENSBTAP00000015189/1-803 --QEYIDAFS DYANFK-- BACU016881/1-802 --QEYIDAFS DYANFK-- bmy_07662T0/1-476 --QEYIDAFS DYANFK--