KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:53 2014 Check: 00 .. Name: ENSP00000342136/1-371 Len: 425 Check: 5755 Weight: 1.00 Name: bmy_09966T0/1-406 Len: 425 Check: 5473 Weight: 1.00 Name: ENSBTAP00000015193/1-368 Len: 425 Check: 4656 Weight: 1.00 Name: BACU019877/1-365 Len: 425 Check: 9198 Weight: 1.00 Name: ENSTTRP00000011312/1-365 Len: 425 Check: 9092 Weight: 1.00 // 1 50 ENSP00000342136/1-371 ---MELELDA GDQDLLAFLL EESGDLGTAP DEAVRAPLDW ALPLSE---- bmy_09966T0/1-406 MSHMELALDP GDHDLLGFLL EESGGLGAGP DEALEAPLGW ELPLFEVGRG ENSBTAP00000015193/1-368 MSHMELALDP GDHDLLGFLL EESGGLGAAP DEALTSPPDW ELPLSE---- BACU019877/1-365 ---MELALDP GDHDLLGFLL EESGGLGAAP DEALEAPLGW ELPLFE---- ENSTTRP00000011312/1-365 ---MELALDP GDHDLLGFLL EESGGLVAAP DEALEAPLGW ELPLFE---- 51 100 ENSP00000342136/1-371 ---------- ---------- ---------- -VPSDWEVDD LLCSLLSPPA bmy_09966T0/1-406 LSRGGPGPVV GCVPEAVGGD RLKPVNLNPV QALSNWDVED FLSCLPSPPA ENSBTAP00000015193/1-368 ---------- ---------- ---------- -SLSDWDVED FLSCLPSPPA BACU019877/1-365 ---------- ---------- ---------- -ALSNWDVED FLSCLPSPPA ENSTTRP00000011312/1-365 ---------- ---------- ---------- -ALSNWDVED FLSCLPSPPA 101 150 ENSP00000342136/1-371 SLNILSSSNP CLVHHDHTYS LPRETVSMDL ESESCRKEGT QMTPQHMEEL bmy_09966T0/1-406 SLNVFSNSNP CLVHHDHTYS LSQEHVSIDL DNERYGEEGA QMTPLHVEEP ENSBTAP00000015193/1-368 VLNVFSNSDP CLVQHDHTYS LSQEHVSIDL DNESYEKERA QMTPLRVEEP BACU019877/1-365 SLNVFSNSNP CLVHHDHTYS LSQEHVSIDL DNERYGEEGA QMTPLHVQEP ENSTTRP00000011312/1-365 SLTVFSNSNP CLVHHDHTYS LSREHVSIDL DTERYGEEGA QMTPLHVEEP 151 200 ENSP00000342136/1-371 AE---QEIAR LVLTDEEKSL LEKEGLILPE TLPLTKTEEQ ILKRVRRKIR bmy_09966T0/1-406 AEQEPQEIAR LILTEEEKRL LEKEGLTLPG TLPLT----- -------KIR ENSBTAP00000015193/1-368 AD---QEIAR LILTEEEKRL LEKEGLTLPG MLPLTKMEEQ VLKRVRRKIR BACU019877/1-365 AE---QETAR LILTEEEKRL LEKEGLTLPG TLPLTKMEEQ VLKRVRRKIR ENSTTRP00000011312/1-365 AE---QEIAR LILTEEEKRL LEKEGLTLPG TLPLTKMEEQ VLKRVRRKIR 201 250 ENSP00000342136/1-371 NKRSAQESRR KKKVYVGGLE SRVLKY---- --TAQNMELQ NKVQLLEEQN bmy_09966T0/1-406 NKKSAQESRR KKKVYVGRLE SRYKRERDSA VGRTEGPEIH SPESGATEQS ENSBTAP00000015193/1-368 NKKSAQESRR KKKVYVGGLE SRVLKY---- --TAQNLELQ NKVQLLEEQN BACU019877/1-365 NKKSAQESRR KKKVYVGRLE SRVLKY---- --TAQNLELQ NKVQLLEEEN ENSTTRP00000011312/1-365 NKKSAQESRR KKKVYVGRLE SRVLKY---- --TAQNLELQ NKVQLLEEEN 251 300 ENSP00000342136/1-371 LSLLDQLRKL QAMVIEIS-- ----NKTSSS STCILVLLVS FCLLLVPAMY bmy_09966T0/1-406 TAPGGRESVP FGSVEETPGH HDSDSKQSQQ RQHLCVLLFS FCLLFVPVMY ENSBTAP00000015193/1-368 LSLLDQLRRL QAMVIQTA-- ----NKASSS STCVLVLLFS FCLLLVPAMY BACU019877/1-365 LSLLDQLRRL QAIMIQTA-- ----NKASSG STCVLVLLFS FCLLFVPVMY ENSTTRP00000011312/1-365 LSLLDQLRRL QAMMIQTA-- ----NKASSG STCVLVLLFS FCLLFVPVMY 301 350 ENSP00000342136/1-371 SSDTRGSLPA EHGVLSRQLR ALPSEDPYQL ELPALQSEVP KDSTHQWLDG bmy_09966T0/1-406 SSDTRGSLPA EHGVLSRQLR ALPSEDPPQL ELPALQSEVP KDSL------ ENSBTAP00000015193/1-368 SSDTRGSLPA EHRVLSRQLR ALPSEDPPQL EPPALQSEVP KDSL------ BACU019877/1-365 SSDTRGSLPA EHGVLSRQLR ALPSEDPPQL ELPALQSEVP KDSL------ ENSTTRP00000011312/1-365 SSDTRGSLPA ERGVLSRQLR ALPSEDPPQL ELPALQSEVP KDSL------ 351 400 ENSP00000342136/1-371 SDCVLQAPGN TSCLLHYMPQ APSAEPPLEW PFPDLFSEPL CRGPILPLQA bmy_09966T0/1-406 -DHELQAPSN SCCVFYHMPR APSAQPPLKL PLPDSFSTSS CPGPISLLHA ENSBTAP00000015193/1-368 -NPELQAASN SCCLFHLMPQ APRAEPPLQL PLPDGFSGCS CPDSISPLHA BACU019877/1-365 -DHELQAPSN SCCLFYHMPQ APSAQPPLKL PQPDSFSTSS CPGPISPLHA ENSTTRP00000011312/1-365 -DHELQAPSN SCCLFYHMPQ APSTEPPLKL TLPDSFSASS CPGPISPLHA 401 450 ENSP00000342136/1-371 NLTRKGGWLP TGSP-SVILQ DRYSG bmy_09966T0/1-406 NLTSEGGWLS THSSTSVILP GRYSG ENSBTAP00000015193/1-368 NLTREEGWLP TPSPTSVILQ GRYSG BACU019877/1-365 NLTSEGGWLS THSSTSVILL GRYSG ENSTTRP00000011312/1-365 NLTSEGGWLS THSSTSVILP GRYSG