KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:54:58 2014 Check: 00 .. Name: ENSP00000261918/1-666 Len: 674 Check: 6253 Weight: 1.00 Name: ENSBTAP00000015210/1-666 Len: 674 Check: 1201 Weight: 1.00 Name: bmy_11974T0/1-632 Len: 674 Check: 293 Weight: 1.00 Name: ENSTTRP00000007545/1-663 Len: 674 Check: 1328 Weight: 1.00 Name: BACU017916/1-663 Len: 674 Check: 2266 Weight: 1.00 // 1 50 ENSP00000261918/1-666 MTPPPPGRAA PSAPRARVPG PPARLGLPLR LRLLLLLWAA AASAQGHLRS ENSBTAP00000015210/1-666 MTPPPSRCTA LGAPRARVSS SLARSRFPLW L-LLQLVWTA AAS-QGHSKS bmy_11974T0/1-632 ---------- ---------- ---------- -------MHG GAG-QDLPAQ ENSTTRP00000007545/1-663 MTPPPPGCAS LGAPRARVPS PLARSGLPLR --LLLLLWTV AAS-QGHPRN BACU017916/1-663 MTPPPPGCAS LGAPRARVPS PLARSELPLR --LLLLLWTA AAS-QGHPKN 51 100 ENSP00000261918/1-666 GPR------I FAVWKGHVGQ DRVDFGQTEP HTVLFHEPGS SSVWVGGRGK ENSBTAP00000015210/1-666 GPR------I SAVWKGRAGQ DHVDFGSTEP HTVLFHEPGS SSVWVGGRNR bmy_11974T0/1-632 GPASTFLPIV SSL--GHAGQ DHVDFGPAEP HTVLFHEPGS SSVWVGGRSK ENSTTRP00000007545/1-663 GPR------I SAVWKGHAGQ DHVDFGLAEP HTVLFHEPGS SSVWVGGRSK BACU017916/1-663 GPR------I SAVWKGHAGQ DHVDFGPAEP HTVLFHEPGS SSVWVGGRSK 101 150 ENSP00000261918/1-666 VYLFDFPEGK NASVRTVNIG STKGSCLDKR DCENYITLLE RRSEGLLACG ENSBTAP00000015210/1-666 IYVFAFSKGR NASVRTVNIG STKGSCRDKQ DCGNYITLLE KQNEGLLACG bmy_11974T0/1-632 VYVFNFSKDR NASMRTVNIG STKGSCRDKQ GCENYITLLE KQGEGLLVCG ENSTTRP00000007545/1-663 VYVFDFSKGR NASMRTVNIG STNGSCRDXX DCKNYITLLE KQGEGLLVCG BACU017916/1-663 VYVFDFSKDR NTSMRTVNIG STKGSCRDKQ GCENYITLLE KQGEGLLVCG 151 200 ENSP00000261918/1-666 TNARHPSCWN LVNGTVVPLG EMRGYAPFSP DENSLVLFEG DEVYSTIRKQ ENSBTAP00000015210/1-666 TNARRPSCWI LVNDSVEFLG ERKGYAPFSP DENSLVLFDG DEVYSTIRKQ bmy_11974T0/1-632 TNARRPSCWT LVNDTAELLG ERRGYAPFSP DENSLVLFDG SEVYSTIRKQ ENSTTRP00000007545/1-663 TNARRPSCWT LVNDTAELLG ERRGYAPFSP DENSLVLFDG SEVYSTIRKQ BACU017916/1-663 TNARRPSCWT LVNDTAELLG ERRGYAPFSP DENSLVLFDG SEVYSTIRKQ 201 250 ENSP00000261918/1-666 EYNGKIPRFR RIRGESELYT SDTVMQNPQF IKATIVHQDQ AYDDKIYYFF ENSBTAP00000015210/1-666 EYNGKIPRFR RIKGEIELYT SDTVMQNPQF IKATIVHQDQ AYDDKIYYFF bmy_11974T0/1-632 EYNGKIPRFR RIKGEIELYT SDTVMQNPQF IKATIVHQDQ AYDDKIYYFF ENSTTRP00000007545/1-663 EYNGKIPRFR RIKGEIELYT SDTVMQNPQF IKATIVHQDQ AYDDKIYYFF BACU017916/1-663 EYNGKIPRFR RIKGEIELYT SDTVMQNPQF IKATIVHQDQ AYDDKIYYFF 251 300 ENSP00000261918/1-666 REDNPDKNPE APLNVSRVAQ LCRGDQGGES SLSVSKWNTF LKAMLVCSDA ENSBTAP00000015210/1-666 REDNPDKNPE APLNVSRVAQ LCRGDQGGES SLSVSKWNTF LKAMLVCSDA bmy_11974T0/1-632 REDNPDKNPE APLNVSRVAQ LCRGDQGGES SLSVSKWNTF LKAMLVCSDA ENSTTRP00000007545/1-663 REDNPDKNPE APLNVSRVAQ LCRGDQGGES SLSVSKWNTF LKAMLVCSDA BACU017916/1-663 REDNPDKNPE APLNVSRVAQ LCRGDQGGES SLSVSKWNTF LKAMLVCSDA 301 350 ENSP00000261918/1-666 ATNKNFNRLQ DVFLLPDPSG QWRDTRVYGV FSNPWNYSAV CVYSLGDIDK ENSBTAP00000015210/1-666 TTNKNFNRLQ DVFLLPDPNG QWKDTRVYGV FSNPWNYSAV CVYSLGDIDK bmy_11974T0/1-632 TSNKNFNRLQ DVFLLPDPNG QWRDTRVYGV FSNPWNYSAV CVYSLGDIDR ENSTTRP00000007545/1-663 TSNKNFNRLQ DVFLLPDPNG QWRDTRVYGV FSNPWNYSAV CVYSLGDIDK BACU017916/1-663 TSNKNFNRLQ DVFLLPDPNG QWRDTRVYGV FSNPWNYSAV CVYSLGDIDK 351 400 ENSP00000261918/1-666 VFRTSSLKGY HSSLPNPRPG KCLPDQQPIP TETFQVADRH PEVAQRVEPM ENSBTAP00000015210/1-666 VFCTSSLKGY HSSLPNPRPG KCLPDRQPIP TETFQVADSH PEVVQRVEPM bmy_11974T0/1-632 VFRTSSLKGY HSDLPNPRPG KCLPDRQPIP TETFQVADSH PEVVQRVEPV ENSTTRP00000007545/1-663 VFRTSSLKGY HSDLPNPRPG KCLPDRQPIP TETFQVADSH PEVVQRVEPM BACU017916/1-663 VFRTSSLKGY HSDLPNPRPG KCLPDRQPIP TETFQVADSH PEVVQRVEPV 401 450 ENSP00000261918/1-666 GPLKTPLFHS KYHYQKVAVH RMQASHGETF HVLYLTTDRG TIHKVVEPGE ENSBTAP00000015210/1-666 GPLKAPLFHS KYHYQKVVVH RMHASNGETF HVLYLTTDKG TIHKVLEPGE bmy_11974T0/1-632 GPLKTPLFHS KYHYQKVVVH RMHASNGETF HVLYLTTDKG TIHKVVESGK ENSTTRP00000007545/1-663 GPLKAPLFHS KYHYQKVVVH RMHASNGETF HVLYLTTDKG TIHKVVESGE BACU017916/1-663 GPLKTPLFHS KYHYQKVVVH RMHASNGETF HVLYLTTDKG TIHKVVESGK 451 500 ENSP00000261918/1-666 QEHSFAFNIM EIQPFRRAAA IQTMSLDAER RKLYVSSQWE VSQVPLDLCE ENSBTAP00000015210/1-666 WEHGLVFNIL EIQPFRRAAA IQAMSLDADR RKLYVNSQWE VSQVPLDLCE bmy_11974T0/1-632 REHSLVFSIL EIQPFRRLAT IQAMSLDADR RKLYVNSQWE VSQVPLDLCE ENSTTRP00000007545/1-663 REHSLVFSIL EIQPFRRPAT IQAMSLDSDR RKLYVNSQWE VSQVPLDLCE BACU017916/1-663 REHSLVFSIL EIQPFRHPAT IQAMSLDADR RKLYVNSQWE VSQVPLDLCE 501 550 ENSP00000261918/1-666 VYGGGCHGCL MSRDPYCGWD QGRCISIYSS --ERSVLQSI NPAEPHKECP ENSBTAP00000015210/1-666 LYTGGCHGCL MARDPYCGWY QDRCVSIYSS QDSRPVLQSI SPVDPHKGCP bmy_11974T0/1-632 VYSGGCHGCL MARDPYCGWN QDRCVSIYSS --PEPVLQSI NPAEPHKGCP ENSTTRP00000007545/1-663 VYSGGCHGCL MARDPYCGWN QDRCVSIYSS --SEPMLQSI NPAEPHKGCP BACU017916/1-663 VYSGGCHGCL MARDPYCGWN QDRCVSIYSS --PEPVLQSI NPAEPHKGCP 551 600 ENSP00000261918/1-666 NPKPDKAPLQ KVSLAPNSRY YLSCPMESRH ATYSWRHKEN VEQSCEPGHQ ENSBTAP00000015210/1-666 NPKPEQAPLQ KVSLAQNSRY YLSCPMESRH ATYSWRHENS VEQSCEPGHQ bmy_11974T0/1-632 NPKPEQAPLQ KVSLAQNSRY YLSCPMESRH ATYSWRHENS VEQSCEPGHQ ENSTTRP00000007545/1-663 NPKPEQAPLQ KVSLAQNSRY YLSCPMESRH ATYSWRHENS VEQSCEPGHQ BACU017916/1-663 NPKPEQAPLQ KVSLAQNSRY YLSCPMESRH ATYSWRHENS VEQSCEPGHQ 601 650 ENSP00000261918/1-666 SPNCILFIEN LTAQQYGHYF CEAQEGSYFR EAQHWQLLPE DGIMAEHLLG ENSBTAP00000015210/1-666 SPNCILFIEN LTDLHYGHYY CEAQEDSYLR EAQHWELLRE DSAMTSQLLG bmy_11974T0/1-632 SPNCILFIEN LTDLQYGHYY CEAQEGAYLR EAQHWELLRD DGAMTSHLLG ENSTTRP00000007545/1-663 SPNCILFIEN LTDLQYGHYY CEAQEGSYLH EAQHWQLLRE DGAMTSHLLG BACU017916/1-663 SPNCILFIEN LTDLQYGHYY CEAQEGSYLR EAQHWELLRE DGAVTSHLLG 651 700 ENSP00000261918/1-666 HACALAASLW LGVLPTLTLG LLVH ENSBTAP00000015210/1-666 HACTLATSLW LGVLPTLILG LLVH bmy_11974T0/1-632 RARALAASLW LGVLPTLTLG LLVH ENSTTRP00000007545/1-663 RACALAASLW LGVLPTLTLG LLVH BACU017916/1-663 RARALAASLW LGVLPTLTLG LLVH