KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:01 2014 Check: 00 .. Name: ENSBTAP00000015230/1-326 Len: 326 Check: 6649 Weight: 1.00 Name: ENSP00000356205/1-326 Len: 326 Check: 5343 Weight: 1.00 Name: BACU018561/1-301 Len: 326 Check: 7040 Weight: 1.00 Name: bmy_19972T0/1-234 Len: 326 Check: 521 Weight: 1.00 Name: ENSTTRP00000009016/1-212 Len: 326 Check: 9001 Weight: 1.00 // 1 50 ENSBTAP00000015230/1-326 MPPSISAFQA AYIGIEVLIA LVSVPGNVLV IWAVKVNQAL RDATFCFIVS ENSP00000356205/1-326 MPPSISAFQA AYIGIEVLIA LVSVPGNVLV IWAVKVNQAL RDATFCFIVS BACU018561/1-301 ---------A AYIGIEVLIA LVSVPGNVLV IWAVKVNQAL RDATFCFIVS bmy_19972T0/1-234 ---------- ---------- -------MPQ IPQAREENGV RG-------- ENSTTRP00000009016/1-212 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000015230/1-326 LAVADVAVGA LVIPLAILIN IGPRTYFHTC LKVACPVLIL TQSSILALLA ENSP00000356205/1-326 LAVADVAVGA LVIPLAILIN IGPQTYFHTC LMVACPVLIL TQSSILALLA BACU018561/1-301 LAVADVAVGA LVIPLAILIN IGPQTYFHTC LMVACPVLIL TQSSILALLA bmy_19972T0/1-234 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009016/1-212 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000015230/1-326 IAVDRYLRVK IPLRYKTVVT PRRAVVAITG CWILSFVVGL TPMFGWNNLS ENSP00000356205/1-326 IAVDRYLRVK IPLRYKMVVT PRRAAVAIAG CWILSFVVGL TPMFGWNNLS BACU018561/1-301 IAVDRYLRVK IPLRYKTVVT PRRAVVAIIG CWILSFVVGL TPMFGWNNLS bmy_19972T0/1-234 -------RPP PSHPYKTVVT PRRAVVAIVG CWILSFVVGL TPMFGWNNLS ENSTTRP00000009016/1-212 ---------- ----YKTVVT PRRAVVAIVG CWILSFVVGL TPMFGWNNLS 151 200 ENSBTAP00000015230/1-326 AVERDWLANG SVGEPVIECQ FEKVISMEYM VYFNFFVWVL PPLLLMVLIY ENSP00000356205/1-326 AVERAWAANG SMGEPVIKCE FEKVISMEYM VYFNFFVWVL PPLLLMVLIY BACU018561/1-301 AVERAWLANG SVGEPVIKCQ FEKVISMEYM VYFNFFVWVL PPLLLMVLIY bmy_19972T0/1-234 AVERAWVANG SVGEPVIKCQ FEKVISMEYM VYFNFFVWVL PPLLLMVLIY ENSTTRP00000009016/1-212 AVERAWVANG SVGEPVIKCQ FEKVISMEYM VYFNFFVWVL PPLLLMVFIY 201 250 ENSBTAP00000015230/1-326 MEVFYLIRKQ LNKKVSASSG DPQKYYGKEL KIAKSLALIL FLFALSWLPL ENSP00000356205/1-326 LEVFYLIRKQ LNKKVSASSG DPQKYYGKEL KIAKSLALIL FLFALSWLPL BACU018561/1-301 LEVFYLIRKQ LNKKVSASSG DPQKYYGKEL KIAKSLALIL FLFALSWLPL bmy_19972T0/1-234 LEVFYLIRKQ LNKKVSASSG DPQKYYGKEL KIAKSLALIL FLFALSWLPL ENSTTRP00000009016/1-212 LEVFYLIRKQ LNRKVSASSG DPQKYYGKEL KIAKSLALIL FLFALSWLPL 251 300 ENSBTAP00000015230/1-326 HILNCITLFC PSCHMPRILI YIAIFLSHGN SAMNPIVYAF RIQKFRVTFL ENSP00000356205/1-326 HILNCITLFC PSCHKPSILT YIAIFLTHGN SAMNPIVYAF RIQKFRVTFL BACU018561/1-301 HILNCITLFC PSCHKPRLLM YIAIFLTHGN SAMNPIVYAF RIQKFRVTFL bmy_19972T0/1-234 HILNCITLFC PSCHKPRLLM YIAIFLTHGN SAMNPIVYAF RIQKFRVTFL ENSTTRP00000009016/1-212 HILNCITLFC PSCHKPRLLM YIAIFLTHGN SAMNPIVYAF RIQKFRVTFL 301 350 ENSBTAP00000015230/1-326 KIWNDHFRCQ PAPPVDEDAP AERPDD ENSP00000356205/1-326 KIWNDHFRCQ PAPPIDEDLP EERPDD BACU018561/1-301 KIWNDHFRCQ ---------- ------ bmy_19972T0/1-234 KIWNDHFRCQ PAPPIDEDPP EERPDD ENSTTRP00000009016/1-212 KIWNDHFRCQ PAPPIDEDPP EERPDD