KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:01 2014 Check: 00 .. Name: ENSP00000255416/1-477 Len: 908 Check: 8532 Weight: 1.00 Name: BACU011685/1-836 Len: 908 Check: 2837 Weight: 1.00 Name: ENSTTRP00000009015/1-481 Len: 908 Check: 1829 Weight: 1.00 Name: ENSBTAP00000015235/1-491 Len: 908 Check: 7155 Weight: 1.00 Name: bmy_19973T0/1-553 Len: 908 Check: 9949 Weight: 1.00 // 1 50 ENSP00000255416/1-477 MMEKN----- ---------- ---------- ---------- ---------- BACU011685/1-836 MVGGAGSRKK GRRYLQGGLT LDFPSGFVVL VLLQSCAAYK LICYYTSWSQ ENSTTRP00000009015/1-481 MRGKA----- ---------- ---------- ---------- ---------- ENSBTAP00000015235/1-491 MTEKA----- ---------- ---------- ---------- ---------- bmy_19973T0/1-553 MRGKA----- ---------- ---------- ---------- ---------- 51 100 ENSP00000255416/1-477 ---------- ---------- ---------- ---------- ---------- BACU011685/1-836 YQEGDGSCFP DAIDHFLCTH IIYSFANISN NEIDTWEWND VTLYDTLNTL ENSTTRP00000009015/1-481 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015235/1-491 ---------- ---------- ---------- ---------- ---------- bmy_19973T0/1-553 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000255416/1-477 ---------- ---------- ---------- ---------- ---------- BACU011685/1-836 KNRNPNLKTL LSVGGWNFGS QRFSKIASNT WSRRTFIKSV PPFLRTHGFD ENSTTRP00000009015/1-481 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015235/1-491 ---------- ---------- ---------- ---------- ---------- bmy_19973T0/1-553 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000255416/1-477 ----TSEGPA ---------- ---------- ---------- ---------- BACU011685/1-836 GLDLTWLYPG RRDKQHLTTL VKEMKAEFAR EAQAGAEQLL LSAAVSAGKI ENSTTRP00000009015/1-481 ----TRESPA ---------- ---------- ---------- ---------- ENSBTAP00000015235/1-491 ----TSEAPA ---------- ---------- ---------- ---------- bmy_19973T0/1-553 ----TWEALA ---------- ---------- ---------- ---------- 201 250 ENSP00000255416/1-477 ---------- ---------- ---------- ---------- CSPEETASES BACU011685/1-836 AIDRGYDIAQ ISRHLDFISL LTYDFRGAWR QTIAHHSPLF RGQEDTSSDR ENSTTRP00000009015/1-481 ---------- ---------- ---------- ---------- CGPEETASES ENSBTAP00000015235/1-491 ---------- ---------- ---------- ---------- CGLEETTSES bmy_19973T0/1-553 ---------- ---------- ---------- ---------- CGPEETASES 251 300 ENSP00000255416/1-477 ---------- ---------- --AKVPT--- --------AE PPGEVAVSES BACU011685/1-836 FSNADYAVSY VLRLGAQANK LVMGIPTFGR SFTLASSKTD VGTPTSGPGI ENSTTRP00000009015/1-481 ---------- ---------- --ANVPT--- --------TE PSGEMAAPKS ENSBTAP00000015235/1-491 ---------- ---------- --AHVPL--- --------TE PSGDTAAPQA bmy_19973T0/1-553 ---------- ---------- --ANVPT--- --------TE PSGEVAAPKS 301 350 ENSP00000255416/1-477 TR-------- ---------- ---------E EQVPK----- ------PQAP BACU011685/1-836 PGRFTKEKGT LAYYEICDFL RGATVHRLLG QQVPYATKGN QWVGYDDQES ENSTTRP00000009015/1-481 TG-------- ---------- ---------E EQAPK----- ------PQEP ENSBTAP00000015235/1-491 PG-------- ---------- ---------G EQAPRGQQAS -----DPQES bmy_19973T0/1-553 TG-------- ---------- ---------E EPAPK----- ------PQEP 351 400 ENSP00000255416/1-477 APQAPT---- ---------- ---------- ---------- -----ASTAT BACU011685/1-836 VKNKVQYLRN RQLASTMVWA LDLDDFQGTF CRQNLHFPLT STIKDVLAER ENSTTRP00000009015/1-481 APQAPA---- ---------- ---------- -------PAA P----APAAS ENSBTAP00000015235/1-491 ARQPPD---- ---------- ---------- -------PAA SAAPAGPAAT bmy_19973T0/1-553 APQAPA---- ---------- ---------- ---------- ------PAAS 401 450 ENSP00000255416/1-477 KPAPPSE--- ----DVPSAP LLLTLDDVSS SSVTVSWEPP ERLGRLGLQG BACU011685/1-836 ATALPSELSS GGQADVPSAP LLLAVEDVSD SSVTVSWEPP ERLGKLGLQG ENSTTRP00000009015/1-481 KPAPPSE--- ----DVPSAP LLLAVEDVSD SSVTVSWEPP ERLGKLGLQG ENSBTAP00000015235/1-491 DPALPRE--- ----DVPSAP LLLAVEDVSD SSVTVSWEPP ERLGRLGLQG bmy_19973T0/1-553 KPTPPSE--- ----DVPSAP LLLAVEDVSD SSVTVSWEPP ERLGKLGLQG 451 500 ENSP00000255416/1-477 YVLELCREGA SEWVPVSARP MMVTQQTVRN LALGDKFLLR VSAVSSAGAG BACU011685/1-836 YVLELRREGA LEWVPVNSRP MMVTQQTVRN LVLGDKFFVR VAAVSSAGAG ENSTTRP00000009015/1-481 YVLELRREGA LEWVPVNSRP MMVTQQTVRN LALGDKFFIR VAAVSSAGAG ENSBTAP00000015235/1-491 YVLELRREGA LDWVPVNARP MMVTQQTLRN LAVGDKFFVR VAAVSSAGAG bmy_19973T0/1-553 YVLELRREGA XEWVPVNSRP MMVTQQTVRN LALGDKFFLR VAAVSSAGAG 501 550 ENSP00000255416/1-477 PPAMLDQPIH IRENI----- ---------- EAPKIRVPRH LRQTYIRQVG BACU011685/1-836 PPAVLDQPVH IQEII----- ---------- EAPKIRVPRH LRQTYVRQVG ENSTTRP00000009015/1-481 PPAVLDQPVH IQEII----- ---------- EAPKIRVPRH LRQTYVRQVG ENSBTAP00000015235/1-491 PPAVLERLIH IQETI----- ---------- EAPKIRVPRH LRQTYIRQVG bmy_19973T0/1-553 PPAVVDQPVH IQEIIEASNQ QPPCCARFNA EAPKIRVPRH LRQTYVRQVG 551 600 ENSP00000255416/1-477 ETVNLQIPFQ GKPKPQATWT HNGHALDSQR VSMRTGDQDS ILFIRSAQRS BACU011685/1-836 EMINLQIPFQ GNPKPQASWT HNGHALDSQR VSVRTRDQDS ILFIRSAQRS ENSTTRP00000009015/1-481 EMINLQIPFQ XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000015235/1-491 ESINLQIPFQ GNPKPQALWT HNGHALDSQR VSVRTGDQDS ILFIRSAQRS bmy_19973T0/1-553 EMINLQIPFQ GNPKPQASWT HNGHALDSQR VSVRTRDQDS ILFIRSAQRS 601 650 ENSP00000255416/1-477 DSGRYELTVR VEDLEAKAVI DILVIEKPGP PSSIRLLDVW GCNAALQWTP BACU011685/1-836 DSGCYELTVQ LEGLEAKAAI DILVIEKPGS PSSIRLLDVW GCNAALEWTP ENSTTRP00000009015/1-481 XXGCYELTVQ LEGLEAKAAI DILVIDKPGS PSSIRLLDVW GCNAALEWTP ENSBTAP00000015235/1-491 DSGCYELTVQ LKDLEAKAAI NILVIEKPGP PRSIRLLDVW NCNATLEWTP bmy_19973T0/1-553 DSGCYELTVQ LEGLEAKAAI DILVIEKPGS PSSIRLLDVW GCNAALEWTP 651 700 ENSP00000255416/1-477 PQDTGNTELL GYMVQKADKK TGQWFT---- ----VLERYH PTTCTISDLI BACU011685/1-836 PQDTGNTELL GYTVQKADKK TGVRPARAEY GEEEVLERYH PTTCAISDLI ENSTTRP00000009015/1-481 PQDTGNTEIL GYTVQKADKK TGQWFT---- ----VLERYH PTTCTISDLI ENSBTAP00000015235/1-491 PQDTGNTELL GYTVQKADKK TGQWFT---- ----VLERCH PTSCTVSDLI bmy_19973T0/1-553 PQDTGNTELL GYTVQKADKK TGQWFT---- ----VLERYH PTTCAISDLI 701 750 ENSP00000255416/1-477 IGNSYSFRVF SENLCGLSTS ATVTKELAHI QKADIAAKPK GFIERDFSEA BACU011685/1-836 VGNSYSFRVF SENLCGLSDS AAVTKELAHI QKTDIVAKPK SFVEQDFSEA ENSTTRP00000009015/1-481 VGNSYSFRVF SENRCGLSAS AAVTKELAHI QKTDIVAKPK SFVERDFSEA ENSBTAP00000015235/1-491 VGNSYSFRVF SENLCGLSAS AAVTKELAHI VKTDIVAKPK SFVERDFSEA bmy_19973T0/1-553 VGNSYSFRVF SENLCGLSAS AAVTKELAHI QKTDIVAKPK SFVEQDFSEA 751 800 ENSP00000255416/1-477 PSFTQPLADH TSTPGYSTQL FCSVRASPKP KIIWMKNKME IQGNPKYRAL BACU011685/1-836 PSFTQPLADH TSTPGYSTQL FCSVRASPKP RIIWMKNKMD IQGDPKYRAL ENSTTRP00000009015/1-481 PSFTQPLADH TSTPGYSTQL FCSVRASPKP RIIWMKNKMD IQGDPKYRAL ENSBTAP00000015235/1-491 PSFTQPLADH TSTPGYSTQL SCSVRASPKP KIIWMKNKMD IQGDPKYRAL bmy_19973T0/1-553 PSFTQPLADH TSTPGYSTQL FCSVRASPKP RIIWMKNKMD IQGDPKYRAL 801 850 ENSP00000255416/1-477 SEQGVCTLEI RKPSPFDSGV YTCKAINVLG EASVDCRLEV KASAAH---- BACU011685/1-836 SEQGVCTLEI RKPSPFDSGV YTCKAINVLG EASVDCRLEV KEQERKQGQD ENSTTRP00000009015/1-481 SEQGVCTLEI RKPSPFDSGV YTCKAINVLG EASVDCRLEV KASATH---- ENSBTAP00000015235/1-491 SEQGVCTLEI RKPSPFDSGV YTCKAINVLG EASVDCRLEV KASATH---- bmy_19973T0/1-553 SEQGVCTLEI RKPSPFDSGV YTCKAINVLG EASVDCRLEV KGAAGLRVQG 851 900 ENSP00000255416/1-477 ---------- ---------- ---------- ---------- ---------- BACU011685/1-836 I--------- ---------- ---------- ---------- ---------- ENSTTRP00000009015/1-481 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015235/1-491 ---------- ---------- ---------- ---------- ---------- bmy_19973T0/1-553 SQAQNQDPRR PEVPISIVMT DGFAPWYLPS RPQARLPGYK GPWKVQRLER 901 950 ENSP00000255416/1-477 -------- BACU011685/1-836 -------- ENSTTRP00000009015/1-481 -------- ENSBTAP00000015235/1-491 -------- bmy_19973T0/1-553 SCRELYTG