KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:02 2014 Check: 00 .. Name: BACU005313/1-266 Len: 279 Check: 2507 Weight: 1.00 Name: ENSP00000301887/1-274 Len: 279 Check: 7102 Weight: 1.00 Name: ENSBTAP00000015237/1-275 Len: 279 Check: 9573 Weight: 1.00 Name: bmy_10197T0/1-269 Len: 279 Check: 4267 Weight: 1.00 Name: ENSTTRP00000008443/1-255 Len: 279 Check: 6271 Weight: 1.00 // 1 50 BACU005313/1-266 MHLCGGDEPL TRMDPEEHQR QLKKKQNNRA AAQRSRQKHT NKADALHQQH ENSP00000301887/1-274 MHLCGGNGLL TQTDPKEQQR QL-KKQKNRA AAQRSRQKHT DKADALHQQH ENSBTAP00000015237/1-275 MHLCGGDGPL TRTDAEEHQR QLRKKQKNRA AAQRSRQKHT NKADALHQQH bmy_10197T0/1-269 MHLCGGDGPL TRMDPEEHQR QLKKKQNNRA AAQRSRQKHT NKADALHQQH ENSTTRP00000008443/1-255 ---------- ---DPDEHQR QLKKKQNNRA AAQRSRQKHT NKADALHQQH 51 100 BACU005313/1-266 ESLEKRNHTL RKEIQALQAE LAWWSRTLHM HERLCPMDCA SCLAPVPPGH ENSP00000301887/1-274 ESLEKDNLAL RKEIQSLQAE LAWWSRTLHV HERLCPMDCA SCSAPGLLGC ENSBTAP00000015237/1-275 ESLEKQNHAL RKEIQALQAE LAWWTQALHV HERLCLLDCA SCLAPGAAGC bmy_10197T0/1-269 ESLEKCNHTL RKEIQALQAE LAWWSRTLHV HERLCPMDYA SCLAPVPPGR ENSTTRP00000008443/1-255 ESLEKHNHTL RKEIQALQAE LAWWSRTLHM HERLCPMDCA SCLAPVSPGC 101 150 BACU005313/1-266 WGQAEWPPGP VRPGPHGCQE QPGPFRTPVS SPMALQLSPD PQPHDKSKWE ENSP00000301887/1-274 WDQAEGLLGP GPQGQHGCRE QLELFQTPGS CYPAQPLSPG PQPHDSPSLL ENSBTAP00000015237/1-275 WGQAERPPGS VPHGQHGCQE QLGLFRTPVS SPSAPQPSPD PQPHGSLSLL bmy_10197T0/1-269 WGQAEWPPGP VRPGPHGCQE QPGPFRTPVS SPMALQLSPD PQPHGSLGLL ENSTTRP00000008443/1-255 WGQAEWPPGP VCPGQHGCQE QPGPFQTPVS SPMALQLSPD PQPHGSLGLL 151 200 BACU005313/1-266 RVSHLKFKHG EIVLVPYPFV FTLYVEMKWF HENLSTGKPV NSSPLGLDTG ENSP00000301887/1-274 QCPLPSLSLG PAVVAEPPVQ LSPSP----L LFASHTGSSL QGSSSKLSAL ENSBTAP00000015237/1-275 LSPLPSLSLG PTAVTASPAQ LSPSP----A QSTSPAGSGL LKPSSKLNIV bmy_10197T0/1-269 LSPLPSLSLG PAPVTASSGQ PSPSP----V QSASPTGSGL LRSSSKLSTL ENSTTRP00000008443/1-255 LSPLPSLSLG PAPVTASSAQ PSPSP----V QSASPTGSGL LRSSSKLSTL 201 250 BACU005313/1-266 LTPFPCLSVF LADSKWGDSR AGKITPPLQQ NDPPPPEGRM E-------LG ENSP00000301887/1-274 QPSLTAQTAP PQPLELEHPT RGKLGSSPDN PSSALGLARL QSREHKPALS ENSBTAP00000015237/1-275 LPSPTAQPAP LEFLRLEHPN GGKPGSTPHS PSAATGLGSL QGREHKPASS bmy_10197T0/1-269 LPSPPAQPPP LQSLGLEHPT RGKLASSTHS PSAALGLGFL QGREHK---- ENSTTRP00000008443/1-255 LPSPPAQPPP LQSLGLEHPT RGKLASSTHS PSAPLGLGFL QGREHKPASP 251 300 BACU005313/1-266 TSGFFGFLSS LFP---FRYF FRKSSQ--- ENSP00000301887/1-274 AATWQGLVVD PSPHPLLAFP LLSSAQVHF ENSBTAP00000015237/1-275 AADWQGLGVD PSPHPLLDFP LLSSAQVHF bmy_10197T0/1-269 -ACFLSNRSA RAPPP-LAFP LLSSAQVHF ENSTTRP00000008443/1-255 ATDQQG---- --PHP-LAFP LLSSAQVYF