KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:55:03 2014 Check: 00 ..
Name: ENSTTRP00000002151/1-267 Len: 323 Check: 6063 Weight: 1.00
Name: ENSP00000296149/1-266 Len: 323 Check: 8585 Weight: 1.00
Name: bmy_05611T0/1-322 Len: 323 Check: 9367 Weight: 1.00
Name: ENSBTAP00000015255/1-266 Len: 323 Check: 9695 Weight: 1.00
//
1 50
ENSTTRP00000002151/1-267 ---------- ---------- ---------- ---------- ----------
ENSP00000296149/1-266 ---------- ---------- ---------- ---------- ----------
bmy_05611T0/1-322 PGSRRPSDWL RPAPRSGVAR ARSFCAVLCR GFCSSASAVS VAPPSSRLGC
ENSBTAP00000015255/1-266 ---------- ---------- ---------- ---------- ----------
51 100
ENSTTRP00000002151/1-267 ------MFPE LNNLLNTTPD QAEQGKLTLL CDAKTDGSFL VHHFLSFYLK
ENSP00000296149/1-266 ------MFVE LNNLLNTTPD RAEQGKLTLL CDAKTDGSFL VHHFLSFYLK
bmy_05611T0/1-322 SFPLLGMFPE LNNLLNTTPD QAEQGKLTLL CDAKTDGSFL VHHFLSFYLK
ENSBTAP00000015255/1-266 ------MFPE LNNLLNTTPE GAEQGKLTLL CDAKTDGSFL VHHFLSFYLK
101 150
ENSTTRP00000002151/1-267 ANCKVCFVAL IQSFSHYNIV GQKLGVSLTT ARECGQLVFL EGLKSAVDVF
ENSP00000296149/1-266 ANCKVCFVAL IQSFSHYSIV GQKLGVSLTM ARERGQLVFL EGLKSAVDVV
bmy_05611T0/1-322 ANCKVCFVAL IQSFSHYNIV GQKLGVSLTT ARECGQLVFL EGLKSAVDVF
ENSBTAP00000015255/1-266 ANCKVCFVAL VQSFSHYNMV GQKLGVSLTT ARERGQLVVL EGLKSAVDIF
151 200
ENSTTRP00000002151/1-267 FRPQEEPHPL QFLXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000296149/1-266 FQAQKEPHPL QFLREANAGN LKPLFEFVRE ALKPVDSGEA RWTYPVLLVD
bmy_05611T0/1-322 FRPQEEPHPL QFLREANSGN LQPLYEFVQE ALKPMDSGEA AWRCPVLLVD
ENSBTAP00000015255/1-266 FRPQEEPHPL QFLREANAGD LQPLYAFVRD ALEPVDCGEA AWRCPVLLVD
201 250
ENSTTRP00000002151/1-267 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XGNVVALVHD SGDAEDEEND
ENSP00000296149/1-266 DLSVLLSLGM GAVAVLDFIH YCRATVCWEL KGNMVVLVHD SGDAEDEEND
bmy_05611T0/1-322 DLSVLLSLGV GAVAVLDFVH YCRATVCRER KGNVVALVHD SGDAEDEEND
ENSBTAP00000015255/1-266 DLSVLLSLGV GPVAVLDFVH YCRATVCREW KGNVVALVHD SGDAEDEESD
251 300
ENSTTRP00000002151/1-267 ILLNGLGHQS HLILRAEGLA TGFCKDVHGQ LRILWRRPSE PTAQRDRSLT
ENSP00000296149/1-266 ILLNGLSHQS HLILRAEGLA TGFCRDVHGQ LRILWRRPSQ PAVHRDQSFT
bmy_05611T0/1-322 ILLNGLGHQS HLILRAEGLA TGFCKDVHGQ LRILWRRPSQ PTAQRDRSLT
ENSBTAP00000015255/1-266 VLLNGLSHQS HLILRAEGLA TGFCKDVHGQ LRILWRRPLQ PTTPRDRSLT
301 350
ENSTTRP00000002151/1-267 YQYKIQDKNV SFCQRNVSCC SVT
ENSP00000296149/1-266 YQYKIQDKSV SFFAKGMSPA VL-
bmy_05611T0/1-322 YQYKIQDKNV SFFAKGMSPA VL-
ENSBTAP00000015255/1-266 YQYKIQDKSV SFFAKGMSPA VL-