KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:03 2014 Check: 00 .. Name: ENSTTRP00000006488/1-447 Len: 738 Check: 7302 Weight: 1.00 Name: ENSP00000413937/1-448 Len: 738 Check: 8642 Weight: 1.00 Name: ENSBTAP00000015257/1-416 Len: 738 Check: 629 Weight: 1.00 Name: bmy_00169T0/1-476 Len: 738 Check: 7584 Weight: 1.00 Name: BACU010462/1-738 Len: 738 Check: 5589 Weight: 1.00 // 1 50 ENSTTRP00000006488/1-447 ---------- ---------- ---------- ---------- ---------- ENSP00000413937/1-448 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015257/1-416 ---------- ---------- ---------- ---------- ---------- bmy_00169T0/1-476 ---------- -MQKHTFPI- ---------- ---------- ---------- BACU010462/1-738 MGLLLKSTGL DDSRVILPVS VEEYQVGQLY SVAEASKNET GGGEGVEVLV 51 100 ENSTTRP00000006488/1-447 ---------- ---------- ---------- ---------- ---------- ENSP00000413937/1-448 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015257/1-416 ---------- ---------- ---------- ---------- ---------- bmy_00169T0/1-476 ---------- ---------- ---------- ---------- ---------- BACU010462/1-738 NEPYEKDGEK GQYTHKIYHL QSKVPTFVRM LAPEGALNIH EKAWNAYPYC 101 150 ENSTTRP00000006488/1-447 ---------- ---------- ---------- ---------- ---------- ENSP00000413937/1-448 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015257/1-416 ---------- ---------- ---------- ---------- ---------- bmy_00169T0/1-476 ---------- ---------- ---------- ---------- ------LTTA BACU010462/1-738 RTVITNEYMK EDFLIKIETW HKPDLGTQEN VHKLEPEAWK HVEAVYIDIA 151 200 ENSTTRP00000006488/1-447 ---------- ---------- ---------- ---------- ---------- ENSP00000413937/1-448 MSSRKLS--- ---------- ---------- ---------- ---------- ENSBTAP00000015257/1-416 --MEAMS--- ---------- ---------- ---------- ---------- bmy_00169T0/1-476 DCGATVSRRS ---------- ------PLSV TW-------- ---------- BACU010462/1-738 DRSQVLSKQE LVNQKDCPYM CAYKLVTVKF KWWGLQNKVE NFIHKQERRL 201 250 ENSTTRP00000006488/1-447 ---------- ---------- ---------- ---------- ---------- ENSP00000413937/1-448 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015257/1-416 ---------- ---------- ---------- ---------- ---------- bmy_00169T0/1-476 ---------- ---------- ---------- ---------- ---------- BACU010462/1-738 FTNFHRQLFC WLDKWVDLTM DDIRRMEEET KRQLDEPCFG SSPSVSSTSA 251 300 ENSTTRP00000006488/1-447 -----MNPQT ELRVRTL--- ----SIHVVT WNVASAAPPP DLSDLLQLNN ENSP00000413937/1-448 ---------- GPKGRRL--- ----SIHVVT WNVASAAPPL DLSDLLQLNN ENSBTAP00000015257/1-416 -------PRT EPRCRTL--- ----SIHVVT WNVASAAPPP DLSDLLQLNN bmy_00169T0/1-476 -------TRT HPPSSMASLL ----SIHVVT WNVASAAPPP DLSDLLQLNN BACU010462/1-738 ARCRELYACT EEPVQGGNFL LRGQSIHVVT WNVASAAPPP DLSDLLQLNN 301 350 ENSTTRP00000006488/1-447 LNLNLDVYVI GLQEMNCGIM SLLSDTAFED PWSSFFMDVL SPLSFVKXXX ENSP00000413937/1-448 RNLNLDIYVI GLQELNSGII SLLSDAAFND SWSSFLMDVL SPLSFIKVSH ENSBTAP00000015257/1-416 LDLDLDIYVI GLQELNCGIM SLLSDTAFED PWSSYFMDVL SPLSFVKVSS bmy_00169T0/1-476 LNLNLDVYVI GLQEMNCGIM SLLSDTAFED PWSSFFMDVL SPLSFVKVSS BACU010462/1-738 LNLNLDVYVI GLQEMNCGIM SLLSDTAFED PWSSFFMDVL SPLSFVKVSS 351 400 ENSTTRP00000006488/1-447 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000413937/1-448 VRMQGILLLV FAKYQHLPYI QILSTKSTPT GLFGYWGNKG GVNICLKLYG ENSBTAP00000015257/1-416 VRMQGLLLLI FAKYQHLPFI QVLSTKSTPT GLFGYW---- ---------- bmy_00169T0/1-476 VRMQGLLLLI FAKYQHLPFI QILSTKSTPT GLFGYWGNKG GVNIFLKFYG BACU010462/1-738 VRMQGLLLLI FAKYQHLPFI QILSTKSTPT GLFGYWGNKG GINIFLKFYG 401 450 ENSTTRP00000006488/1-447 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXX----- ENSP00000413937/1-448 YYVSIINCHL PPHISNNYQR LEHFDRILEM QNCEGRDIPN ILDHD----- ENSBTAP00000015257/1-416 ---------- ---------R LEHFDRILEM QNFEAQDTPN ILDHD----- bmy_00169T0/1-476 YYVSIINCHL PPHMANNDQR LEHFDRILEM QNFEAQDIPN ILDHD----- BACU010462/1-738 YYVSIINCHL PPHMANNDQR LEHFDRILEM QNFEAQDIPN ILDHDFAYLR 451 500 ENSTTRP00000006488/1-447 ---------- ---------- ----LILWFG DMNFRIEDFG LHFVRESIKN ENSP00000413937/1-448 ---------- ---------- ----LIIWFG DMNFRIEDFG LHFVRESIKN ENSBTAP00000015257/1-416 ---------- ---------- ----LILWFG DMNFRIEDFG LHFVRESIKN bmy_00169T0/1-476 ---------- ---------- ----LVLWFG DMNFRIEDFG LHFVRESIKN BACU010462/1-738 SATPSLSLAA LPCLETLGTS EHPSLILWFG DMNFRIEDFG LHFVRESIKN 501 550 ENSTTRP00000006488/1-447 RCYSDLWEKD QLSIAKRHDP LLREFQEGPL LFPPTYKFDK NSSNYDTSEK ENSP00000413937/1-448 RCYGGLWEKD QLSIAKKHDP LLREFQEGRL LFPPTYKFDR NSNDYDTSEK ENSBTAP00000015257/1-416 QRYSDLWEKD QLSIAKRHDP LLREFQEGSL LFPPTYKFDK NSNNYDTSEK bmy_00169T0/1-476 QCYSDLWEKD QLSIAKRHDP LLREFQEGPL LFPPTYKFDK NSNNYDTSEK BACU010462/1-738 QCYSDLWEKD QLSIAKRHDL LLREFQEGPL LFPPTYKFDK NSNNYDTSEK 551 600 ENSTTRP00000006488/1-447 KRKPAWTDRI LWRLKRQPQA AIHTPTLSAP HFTLFLRSYV SHMLYSVSDH ENSP00000413937/1-448 KRKPAWTDRI LWRLKRQPCA GPDTPIPPAS HFSLSLRGYS SHMTYGISDH ENSBTAP00000015257/1-416 KRKPAWTDRI LWRLKRQSQT DFQTPELSAP -FALFLRSYV SHMVYTISDH bmy_00169T0/1-476 KRKPAWTDRI LWRLKRQPQA TIHTPTLSAP HFTLFLRSYV SHMLYSISDH BACU010462/1-738 KRKPAWTDRI LWRLKRQPQA AVHTPRLSAP HFTLFPRSYV SHMLYSISDH 601 650 ENSTTRP00000006488/1-447 KPVTSTFDLE LKPLVSAPLI TLLPESPCTA ESDMLISYSL TADFLSSPWD ENSP00000413937/1-448 KPVSGTFDLE LKPLVSAPLI VLMPEDLWTV ENDMMVSYSS TSDFPSSPWD ENSBTAP00000015257/1-416 KPVTCTFDLE LKPLVSAPLI TLLPKGPCTM ENDLLISYCL AADFLSSPWD bmy_00169T0/1-476 KPVTSTFDLE LKPLVSAPLI TLLPESLCTE ESDLLISYSL TADFLSSPWD BACU010462/1-738 KPVTSTFDLE LKPLVSAPLI TLLPESPCTE ESDLLISYSL TADFLSSPWD 651 700 ENSTTRP00000006488/1-447 WIGLYKVGLR HINDYVSYVW VRDNQVSFSD GLNQVYIDIS DIRETEDQFL ENSP00000413937/1-448 WIGLYKVGLR DVNDYVSYAW VGDSKVSCSD NLNQVYIDIS NIPTTEDEFL ENSBTAP00000015257/1-416 WIGLYKVGLR HINDYVSYVW VKDNQVSFSD RLNQVYIDIS DIPETEDQFL bmy_00169T0/1-476 WIGLYKVGLR HINDYVSYVW VRDNQVSFSD GLNQVYIDIS DIPETEDQFL BACU010462/1-738 WIGLYKVGLR HINDYVSYVW VRDNQVSFSD GLNQVYIDIS DIPETEDQFL 701 750 ENSTTRP00000006488/1-447 LFYYSNNLHS VVGISTPFKI QPRSFLAEGP LDEAQPQI ENSP00000413937/1-448 LCYYSNSLRS VVGISRPFQI PPGS-LREDP LGEAQPQI ENSBTAP00000015257/1-416 LFYYSNNLHS VVGISKPFKI QPFSFLEEDP LDEAQPQI bmy_00169T0/1-476 LFYYSNNLHS VVGISKPFKI QPRSFLAEGP LDEAQPQI BACU010462/1-738 LFYYSNNLHS VVGISKPFKI QPRSFLAEGP LDEAQPQI