KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:55:04 2014 Check: 00 .. Name: ENSP00000358316/1-465 Len: 674 Check: 8115 Weight: 1.00 Name: ENSBTAP00000015267/1-467 Len: 674 Check: 5832 Weight: 1.00 Name: bmy_03049T0/1-437 Len: 674 Check: 6885 Weight: 1.00 Name: ENSTTRP00000011368/1-464 Len: 674 Check: 6176 Weight: 1.00 // 1 50 ENSP00000358316/1-465 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015267/1-467 ---------- ---------- ---------- ---------- ---------- bmy_03049T0/1-437 MKDGYSITIE VEVQIKRAAV KSRAAGKPHC GTMEGSKKHR ASTPRMPRAV ENSTTRP00000011368/1-464 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000358316/1-465 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015267/1-467 ---------- ---------- ---------- ---------- ---------- bmy_03049T0/1-437 LCQTARRMKA QDFPWVTSFL QLGARVKSSR RQKFGNFPLT HISDKAGRVV ENSTTRP00000011368/1-464 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000358316/1-465 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015267/1-467 ---------- ---------- ---------- ---------- ---------- bmy_03049T0/1-437 PTRDWGPSQT LEGQKRPPEL SLPSTVHRAH GCGWERGAAW GSAQVTSLVL ENSTTRP00000011368/1-464 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000358316/1-465 ---------- ---------- ---------- -MAGGKQFTF SYENEVCKQD ENSBTAP00000015267/1-467 ---------- ---------- ---------- ----GKQFTF YYEKEVCKQD bmy_03049T0/1-437 SQKQFSGGSI PFPCTEMLFQ GTEGFGLNGL VPSPSKQLTL YYENEVCKQD ENSTTRP00000011368/1-464 ---------- ---------- ---------- -----KQFTL YYENEVCKQD 201 250 ENSP00000358316/1-465 YFIKSPPSQL FSSVTSWKKR FFILSKAGEK SFSLSYYKDH HHRGSIEIDQ ENSBTAP00000015267/1-467 YFIKSPPPQL FFSATSWKKR FFILSKSGEK DFSLSYYKDH HHRGSIEIDR bmy_03049T0/1-437 YFIKSPPPQL FFSSASWKKR LFILSKSGEK GFSLSYYKDH HHRGSVEIDR ENSTTRP00000011368/1-464 YFIKSPPPQL FFSATSWKKR LFILSKSGEK GFSLSYYKDH HHRGSIELDQ 251 300 ENSP00000358316/1-465 NSSVEVGISS QEKMQSVQKM FKCHPDEVMS IRTTNREYFL IGHD-REKIK ENSBTAP00000015267/1-467 NSSVEVGIRN HEKMQSVQKM FKCHPDEVMS IKTTNREYFL IGSDSREKIK bmy_03049T0/1-437 NSSVEVGISN HEKMQSVQKM FNCHPEEVMS IRTTNREYFL IGYD-REKIK ENSTTRP00000011368/1-464 SSSIEVGISN HEKMQSVQKM FNCHHDEVMS IRATNREYFL IGYD-REKIK 301 350 ENSP00000358316/1-465 DWVSFMSSFR QDIKATQQNT E-EELSLGNK RTLFYSSPLL GPSSTSEAVG ENSBTAP00000015267/1-467 DWVSFLSSLC QDIKAAHQNT EQEKLSSGDK RPSSD--PLL GPFRMPEAVS bmy_03049T0/1-437 DWVSFLSSLC RNMKAAHQNT E--------- ---------- ---------- ENSTTRP00000011368/1-464 DWVSFLSSLC RNRKAARQNT G-EKLSFGDT RPSSDPIPLL GLSYTLEAVS 351 400 ENSP00000358316/1-465 SSSPRNGLQD KHLMEQSSPG FRQTHLQD-- LSEATQDVKE ENHYLTPRSV ENSBTAP00000015267/1-467 ATIARNSLPD MRLVKEQSPG LREARLSHDF SSEISEDSEE DSHYISPRSI bmy_03049T0/1-437 ---------- ---------- ---------- ---------- ------QLAL ENSTTRP00000011368/1-464 TTTARKSLLD MHLMEKRSSG LREAHPPHAF LPETAQDTEE ESHYIYPRSI 401 450 ENSP00000358316/1-465 LLELDNIIAS SDSGESIETD G---PDQVSG RIECHYEPME SYF-----FK ENSBTAP00000015267/1-467 LLELGN-IAP NDSGELTDPI GPHSPDKVSK TAECHYLSMK SCFLCCSLLK bmy_03049T0/1-437 IQGINN---- ---------- ---------- ---------- --V-----SK ENSTTRP00000011368/1-464 RRELENDIAA NDSGEPVEPI GPGSPDQVSE AVECHYMSMK SCV-----SK 451 500 ENSP00000358316/1-465 ETSHESVDSS KEEPQTLPET QDGDLHLQEQ GSGIDWCLSP ADVEAQTTND ENSBTAP00000015267/1-467 ELSLESVD-G KEEFQPLAEI QNGELHQQEQ ASGTHFYLPP DNSEAQTTND bmy_03049T0/1-437 ETSHKSAD-G KEESQTLADM LNGELHPQEQ GSGTGSCLSP ANTEAQITND ENSTTRP00000011368/1-464 ESSHKSAD-G KEESQTLADI LNGELHPQEQ GSGTGSCLSP ANTEAQITND 501 550 ENSP00000358316/1-465 QK-------- ------GNIP DESQVEKLNV FLSPPDVINY LALTEATGRI ENSBTAP00000015267/1-467 ATQSASLTVV QLSILINNIP DESQVQKLNV FLSLPDIKTY LVLKEAAGRI bmy_03049T0/1-437 KK-------- ------GSAS --LSVVQLSI LINQESV--- ---------- ENSTTRP00000011368/1-464 KK-------- ------GNTP DEIQVEKLNM FLSPPDIINH LALREAAGRI 551 600 ENSP00000358316/1-465 CVSQWEGPPR LGCIFCHGDH LLAVNDLKPQ SLEEVSLFLT RSIQKEDSFR ENSBTAP00000015267/1-467 CVAQWDAPPR LGCLFFHGDH LLAVNDLKPQ SLEEVSLFLS RSIRREK--- bmy_03049T0/1-437 ---------- ---------- ---------- ---QLALL-- ---------- ENSTTRP00000011368/1-464 CVAQWDGPPH LGCLFFHGDH LLAVNDLKPQ SLEEVSLFLS RSIQGEDPFK 601 650 ENSP00000358316/1-465 ILSYQVAFGE GTELRDRAPG FRTSDRHDVA KRACMESDWC RDSKTAPSTN ENSBTAP00000015267/1-467 ---VKLTIG- ---------- -RIPNSEKFH TIACTCSLQD QGVKPSQLVT bmy_03049T0/1-437 ---------- ---------- ------TDVV TKDSEYQSWK RSKQSPGL-- ENSTTRP00000011368/1-464 ILLCQVVFGG STGLGDTA-G FKTSGQHDMA KRACMESGRL SVYIQPPLTK 651 700 ENSP00000358316/1-465 LCLSFLFCKI MTNDGAGCWI IK-- ENSBTAP00000015267/1-467 SVLESTLKRT RAIKRGQRKR SGE- bmy_03049T0/1-437 ---------- -------FWN LGSP ENSTTRP00000011368/1-464 WCLNLLFCKI RDNDNASYWR IK--