KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:05 2014 Check: 00 .. Name: ENSP00000216392/1-847 Len: 898 Check: 6656 Weight: 1.00 Name: ENSTTRP00000001202/1-768 Len: 898 Check: 4678 Weight: 1.00 Name: ENSBTAP00000015277/1-851 Len: 898 Check: 8315 Weight: 1.00 Name: bmy_06181T0/1-837 Len: 898 Check: 2102 Weight: 1.00 Name: BACU015333/1-864 Len: 898 Check: 5902 Weight: 1.00 // 1 50 ENSP00000216392/1-847 MAKPLTDQEK RRQISIRGIV GVENVAELKK SFNRHLHFTL VKDRNVATTR ENSTTRP00000001202/1-768 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015277/1-851 MAKPLTDQEK RRQISIRGIV GVENVAELKK GFNRHLHFTL VKDRNVATPR bmy_06181T0/1-837 MAKPLTDQEK RRQISIRGIV GVENVXELKK GFNRHLHFTL VKDRNVATPR BACU015333/1-864 MAKPLTDQEK RRQISIRGIV GVENVAELKK GFNRHLHFTL VKDRNVATPR 51 100 ENSP00000216392/1-847 DYYFALAHTV RDHLVGRWIR TQQHYYDKCP KRVYYLSLEF YMGRTLQNTM ENSTTRP00000001202/1-768 ---------- ---------- ---------- -RVYYLSLEF YMGRTLQNTM ENSBTAP00000015277/1-851 DYFFALAHTV RDHLVGRWIR TQQYYYEKCP KRVYYLSLEF YMGRTLQNTM bmy_06181T0/1-837 DYFFALAHTV RDHLVGRWIR TQQYYYETCP KRVYYLSLEF YMGRTLQNTM BACU015333/1-864 DYFFALAHTV RDHLVGRWIR TQQHYYETCP KRVYYLSLEF YMGRTLQNTM 101 150 ENSP00000216392/1-847 INLGLQNACD EAIYQLGLDI EELEEIEEDA GLGNGGLGRL AACFLDSMAT ENSTTRP00000001202/1-768 INLGLQNACD EAIYQLGLDM EELEEIEEDA GLGNGGLGRL AACFLDSMAT ENSBTAP00000015277/1-851 INLGLQNACD EAIYQLGLDM EELEEIEEDA GLGNGGLGRL AACFLDSMAT bmy_06181T0/1-837 INLGLQNACD EAIYQLGLDM EELEEVEEDA GLGNGGLGRL AACFLDSMAT BACU015333/1-864 INLGLQNACD EAIYQLGLDM EELEEVEEDA GLGNGGLGRL AACFLDSMAT 151 200 ENSP00000216392/1-847 LGLAAYGYGI RYEYGIFNQK IRDGWQVEEA DDWLRYGNPW EKSRPEFMLP ENSTTRP00000001202/1-768 LGLAAYGYGI RYEYGIFNQK IRDGWQIEEA DDWLRHGNPW EKARPEFMLP ENSBTAP00000015277/1-851 LGLAAYGYGI RYEYGIFNQK IRDGWQIEEA DDWLRHGNPW EKARPEFMLP bmy_06181T0/1-837 LGLAAYGYGI RYEYGIFNQK IRDGWQIEEA DDWLRHGNPW EKARPEFMLP BACU015333/1-864 LGLAAYGYGI RYEYGIFNQK IREGWQIEEA DDWLRHGNPW EKARPEFMLP 201 250 ENSP00000216392/1-847 VHFYGKVEHT NTGTKWIDTQ VVLALPYDTP VPGYMNNTVN TMRLWSARAP ENSTTRP00000001202/1-768 VHFYGNVEHT EAGTKWINTQ VVLALPYDTP VPGYLNNTVN TMRLWSARAP ENSBTAP00000015277/1-851 VHFYGRVEHT EAGTKWTDTQ VVLALPYDTP VPGYLNNTVN TMRLWSARAP bmy_06181T0/1-837 VHFYGKVEHT EAGAKWINTQ VVLALPYDTP VPGYLNNTVN TMRLWSARAP BACU015333/1-864 VHFYGKVEHT EAGAKWINTQ VVLALPYDTP VPGYLNNTVN TMRLWSARAP 251 300 ENSP00000216392/1-847 NDFNLRDFNV GDYIQAVLDR NLAENISRVL YPNDNFFEGK ELRLKQEYFV ENSTTRP00000001202/1-768 NDFNLRDFNV GDYIQAVLXX XXXXXXXXXX XXXXXFFEGK ELRLKQEYFV ENSBTAP00000015277/1-851 NDFNLRDFNV GDYIQAVLDR NLAENISRVL YPNDNFFEGK ELRLKQEYFV bmy_06181T0/1-837 NDFNLRDFNV GDYIQAVLDR NLAENISRVL YPNDN----- ---------- BACU015333/1-864 NDFNLRDFNV GDYIQAVLDR NLAENISRVL YPNDNFFEGK ELRLKQEYFA 301 350 ENSP00000216392/1-847 VAATLQDIIR RFKASKFGST RGAGTVFDAF PDQ------- ------VAIQ ENSTTRP00000001202/1-768 VAATLQDVIR RFKASKLGSS RSAGTAFDAF PDQ------- -------VIQ ENSBTAP00000015277/1-851 VAATLQDVIR RFKASKFDSS NSTKTAFDAF PDQ------- ------VAIQ bmy_06181T0/1-837 ---------- ---------- ---------- ---------- ------VAIQ BACU015333/1-864 VAATLQDVIR RFKASKLGSS GSAATAFDAF PDQASIQPER RREQLRVAIQ 351 400 ENSP00000216392/1-847 LNDTHPALAI PELMRIFVDI EKLPWSKAWE LTQKTFAYTN HTVLPEALER ENSTTRP00000001202/1-768 LNDTHPALAI PELMRIF-DI EKLPXXXAWE ITQKTFAYTN HTVLPEALER ENSBTAP00000015277/1-851 LNDTHPSLAI PELMRIFVDI EKLPWSKAWE ITQKTFAYTN HTVLPEALER bmy_06181T0/1-837 LNDTHPALAI PELMRIFVDI EKLPWSKAWD ITQKTFAYTN HTVLPEALER BACU015333/1-864 LNDTHPALAI PELMRIFVDI EKLPWSKAWD ITQKTFAYTN HTVLPEALER 401 450 ENSP00000216392/1-847 WPVDLVEKLL PRHLEIIYEI NQKHLDRIVA LFPKDVDRLR RMSLIEEEGS ENSTTRP00000001202/1-768 WPVQLVEKLL PRHLQIIYEM NQKHLDKIAA LFPKDVDRLR RMSLIEEEGG ENSBTAP00000015277/1-851 WPVELVEKLL PRHLQIIYEI NQKHLDKIAA LFPKDVDRLR RMSLIEEEGG bmy_06181T0/1-837 WPVELVEKLL PRHLQIIYEM NQKHLDKIAA LFPKDVDRLR RMSLIEEEGG BACU015333/1-864 WPVELVEKLL PRHLQIIYEM NQKHLDKIAA LFPKDVDRLR RMSLIEEEGG 451 500 ENSP00000216392/1-847 KRINMAHLCI VGSHAVNGVA KIHSDIVKTK VFKDFSELEP DKFQNKTNGI ENSTTRP00000001202/1-768 KRINMAHLCI VGSHAVNGVA KIHSDIVKNQ VFKDFSELEP DKFQNKTNGI ENSBTAP00000015277/1-851 KRINMAHLCI VGSHAVNGVA KIHSDIVKTQ VFKDFSELEP DKFQNKTNGI bmy_06181T0/1-837 KRINMAHLCI VGSHAVNGVA KIHSDILKNQ VFKDFSELEP DKFQNKTNGI BACU015333/1-864 KRINMAHLCI VGSHAVNGVA KIHSDIVKNQ VFKDFSELEP DKFQNKTNGI 501 550 ENSP00000216392/1-847 TPRRWLLLCN PGLAELIAEK IGEDYVKDLS QLTKLHSFLG DDVFLRELAK ENSTTRP00000001202/1-768 TPRRWLLLCN PGLAELIAEK IGEDYVKDLN QLTKLNSFLG DDVFLREISN ENSBTAP00000015277/1-851 TPRRWLLLCN PGLAELIAEK IGEDYVKDLS QLTKLNSFLG DDIFLREISN bmy_06181T0/1-837 TPRRWLLLCN PGLAELIAEK IGEDYVKDLS QLTKLNGFLG DDIFLREISN BACU015333/1-864 TPRRWLLLCN PGLAELIAEK IGEDYVKDLS QLTKLNGFLG DDIFLREISS 551 600 ENSP00000216392/1-847 VKQENKLKFS QFLETEYKVK INPSSMFDVQ VKRIHEYKRQ LLNCLHVITM ENSTTRP00000001202/1-768 VKQENKLKFS QFLEKEYKVK INPSSMFDVQ VKRIHEYKRQ LLNCLHVVTM ENSBTAP00000015277/1-851 VKQENKLKFS QFLEKEYKVK INPSSMFDVQ VKRIHEYKRQ LLNCLHVVTM bmy_06181T0/1-837 VKQENKMKFS QFLEMEYKVK INPSSMFDVQ VKRIHEYKRQ LLNCLHVVTM BACU015333/1-864 VKQENKMKFS QFLETEYKVK INPSSMFDVQ VKRIHEYKRQ LLNCLHVVTM 601 650 ENSP00000216392/1-847 YNR------- ---------- ---------- -------IKK DPKKLFVPRT ENSTTRP00000001202/1-768 YNR------- ---------- ---------- -------FTK DPMKLFVPRT ENSBTAP00000015277/1-851 YNR------- ---------- ---------- -------IKK DPKKLFVPRT bmy_06181T0/1-837 YNRESALQPP TSPQRWSSHH PGHPPSSIPS PSPSFAGIKK DPKKLFVPRT BACU015333/1-864 YNR------- ---------- ---------- -------IKK DPKKLFVPRT 651 700 ENSP00000216392/1-847 VIIGGKAAPG YHMAKMIIKL ITSVADVVNN DPMVGSKLKV IFLENYRVSL ENSTTRP00000001202/1-768 VILRENAAPG YHMAKLIIKL ITSVAEVVNN DPMVGSKLKL IFLENYKVSL ENSBTAP00000015277/1-851 VIIGGKAAPG YYMAKLIIKL ITSVAEVVNN DPVVGSKLKL IFLENYRVSL bmy_06181T0/1-837 VIIGGKAAPG YHMAKLIIKL ITSVAEVVNN DPMVGSKLKL IFLENYRVSL BACU015333/1-864 VIIGGKAAPG YHMAKLIIKL ITSVAEVVNN DPMVGSKLKL IFLENYRVSL 701 750 ENSP00000216392/1-847 AEKVIPATDL SEQISTAGTE ASGTGNMKFM LNGALTIGTM DGANVEMAEE ENSTTRP00000001202/1-768 AEKVIPATDL SEQISTAGTE ASGTGNMKFM LNGALTIGTM DGANVEMAEE ENSBTAP00000015277/1-851 AEKVIPATDL SEQISTAGTE ASGTGNMKFM LNGALTIGTM DGANVEMAEE bmy_06181T0/1-837 AEKVIPATDL SEQISTAGTE ASGTGNMKFM LNGALTIGTM DGANVEMAEE BACU015333/1-864 AEKVIPATDL SEQISTAGTE ASGTGNMKFM LNGALTIGTM DGANVEMAEE 751 800 ENSP00000216392/1-847 AGEENLFIFG MRIDDVAALD KKGYEAKEYY EALPELKLVI DQIDNGFFSP ENSTTRP00000001202/1-768 AGEENLFIFG MRIEDVAALD KKGYKAKEYY EALPELKLAI DQIDKGFFSP ENSBTAP00000015277/1-851 AGEENLFIFG MRIEDVAALD KKGYEAKEYY EALPELKLAI DQIDKGFFSP bmy_06181T0/1-837 AGEENLFIFG MRVEDVAALD KKGYKAKEYY EALPELKLAI DQIDKGFFSP BACU015333/1-864 AGEENLFIFG MRVEDVAALD KKGYKAKEYY EALPELKLAI DQIDKGFFSP 801 850 ENSP00000216392/1-847 KQPDLFKDII NMLFYHDRFK VFADYEAYVK CQDKVSQLYM NPKAWNTMVL ENSTTRP00000001202/1-768 KQPDLFKDLV NMLFYHDRFK VFADYEAYVK CQEKVSQLYM NPKAWNIMVL ENSBTAP00000015277/1-851 KQPDLFKDLV NMLFYHDRFK VFADYEAYVK CQEKVSQLYM NPKAWNIMVL bmy_06181T0/1-837 KQPDLFKDLV NMLFYHDRFK VFADYEAYVK CQEKVSQLYM NPKAWNITVL BACU015333/1-864 KQPDLFKDLV NMLFYHDRFK VFADYEAYVK CQEKVSQLYM NPKAWNITVL 851 900 ENSP00000216392/1-847 KNIAASGKFS SDRTIKEYAQ NIWNVEPSDL KISLSNES-- --NKVNGN ENSTTRP00000001202/1-768 RNIAASGKFS SDRTIKEYAR DIWNMEPSDL KISLSSEPSS GVDKANGK ENSBTAP00000015277/1-851 KNIAASGKFS SDRTIKEYAR DIWNMEPSDI KISLSSDPSG GANKANGK bmy_06181T0/1-837 RNIAASGKFS SDRTIKEYAR DIWNMEPSDL KISLSSEPSS GVNKANGK BACU015333/1-864 RNIAASGKFS SDRTIKEYAR DIWNVEPSDL KIPLSSEPSS GANKANGK