KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:07 2014 Check: 00 .. Name: ENSTTRP00000013981/1-860 Len: 885 Check: 7744 Weight: 1.00 Name: ENSP00000262477/1-862 Len: 885 Check: 5353 Weight: 1.00 Name: bmy_08630T0/1-825 Len: 885 Check: 9885 Weight: 1.00 Name: BACU001301/1-872 Len: 885 Check: 9231 Weight: 1.00 Name: ENSBTAP00000015290/1-862 Len: 885 Check: 7417 Weight: 1.00 // 1 50 ENSTTRP00000013981/1-860 MAQPGPAPQP DVSLQQRVA- LEKINAEFLR AKQXXXXXXX XXXXXXXXXX ENSP00000262477/1-862 MAQPGPASQP DVSLQQRVAE LEKINAEFLR AQQQLEQEFN QKRAKFKELY bmy_08630T0/1-825 ---------- ---------- --MDNVSLIK VNFSL----- -----MESLL BACU001301/1-872 ---------- ---LQQRVAE LEKINAEFLR AKQQLEQEFN QKRAKFKELY ENSBTAP00000015290/1-862 MAQPGPAPQP DVSLQQRVAE LEKINAEFLR AKQQLEQEFN QKRAKFKELY 51 100 ENSTTRP00000013981/1-860 XXXXXDLKRQ NAVLQAAQDD LGHLRTQLWE AQAEMENIKA IATVSENTKQ ENSP00000262477/1-862 LAKEEDLKRQ NAVLQAAQDD LGHLRTQLWE AQAEMENIKA IATVSENTKQ bmy_08630T0/1-825 LFFLEDLKRQ NAVLQAAQDD LGHLRTQLWE AQAEMENIKA IATVSENTKQ BACU001301/1-872 LAKEEDLKRQ NAVLQAAQDD LGHLRTQLWE AQAEMENIKA IATVSENTKQ ENSBTAP00000015290/1-862 LAKEEDLKRQ NAVLQAAQDD LGHLRTQLWE AQAEMENIKA IATVSENTKQ 101 150 ENSTTRP00000013981/1-860 EAIDEVKRQW REEVASLQAV MKETVRDYEH QFHLRLEQER TQWAQYRESA ENSP00000262477/1-862 EAIDEVKRQW REEVASLQAV MKETVRDYEH QFHLRLEQER TQWAQYRESA bmy_08630T0/1-825 EAIDEVKRQW REEVASLQAV MKETVRDYEH QFHLRLEQER TQWAQYRESA BACU001301/1-872 EAIDEVKRQW REEVASLQAV MKETVRDYEH QFHLRLEQER TQWAQYRESA ENSBTAP00000015290/1-862 EAIDEVKRQW REEVASLQAV MKETVRDYEH QFHLRLEQER TQWAQYRESA 151 200 ENSTTRP00000013981/1-860 EREIADLRRR LSEGQEEENL ENEMKKAQED AEKLRSVVMP -EKEIAALKD ENSP00000262477/1-862 EREIADLRRR LSEGQEEENL ENEMKKAQED AEKLRSVVMP MEKEIAALKD bmy_08630T0/1-825 EREIADLRRR LSEGQEEENL ENEMKKAQED AEKLRSVVMP MEKEIAALKD BACU001301/1-872 EREIADLRRR LSEGQEEENL ENEMKKAQED AEKLRSVVMP MEKEIAALKD ENSBTAP00000015290/1-862 EREIADLRRR LSEGQEEENL ENEMKKAQED AEKLRSVVMP MEKEIAALKD 201 250 ENSTTRP00000013981/1-860 KLTEAEDKIK ELEASKVKEL NHYLEAEKSC RTDLEMYVAV LNTQKSVLQE ENSP00000262477/1-862 KLTEAEDKIK ELEASKVKEL NHYLEAEKSC RTDLEMYVAV LNTQKSVLQE bmy_08630T0/1-825 KLTEAEDKIK ELEASKVKEL NHYLEAEKSC RTDLEMYVAV LNTQKSVLQE BACU001301/1-872 KLTEAEDKIK ELEASKVKEL NHYLEAEKSC RTDLEMYVAV LNTQKSVLQE ENSBTAP00000015290/1-862 KLTEAEDKIK ELEASKVKEL NHYLEAEKSC RTDLEMYVAV LNTQKSVLQE 251 300 ENSTTRP00000013981/1-860 DAEKLRKELH E--------- ---------- ----VCHLLE QERQQHNQLK ENSP00000262477/1-862 DAEKLRKELH E--------- ---------- ----VCHLLE QERQQHNQLK bmy_08630T0/1-825 DAEKLRKELH E--------- ---------- ----VCHLLE QERQQHNQLK BACU001301/1-872 DAEKLRKELH EEIVQDYQTF LIYLEKYLRS FIKMICHLLE QERQQHNQLK ENSBTAP00000015290/1-862 DAEKLRKELH E--------- ---------- ----VCHLLE QERQQHNQLK 301 350 ENSTTRP00000013981/1-860 HTWQKANDQF LESQRLLMRD MQRMEIVLTS EQLRQVEELK KKDQEEDEQQ ENSP00000262477/1-862 HTWQKANDQF LESQRLLMRD MQRMEIVLTS EQLRQVEELK KKDQEDDEQQ bmy_08630T0/1-825 HTWQKANDQF LESQRLLMRD MQRMEIVLTS EQLRQVEELK KKDQEEDEQQ BACU001301/1-872 HTWQKANDQF LESQRLLMRD MQRMEIVLTS EQLRQVEELK KKDQEEDEQQ ENSBTAP00000015290/1-862 HTWQKANDQF LESQRLLMRD MQRMEIVLTS EQLRQVEELK KKDQEEDEQQ 351 400 ENSTTRP00000013981/1-860 RLSKRKDHKK TNVEEEVKIP VVCALTHEES SAQLSNEEEH LDSTHGSVHS ENSP00000262477/1-862 RLNKRKDHKK ADVEEEIKIP VVCALTQEES SAQLSNEEEH LDSTRGSVHS bmy_08630T0/1-825 RLSKRKDHKK TNVEEEVKIP VVCALTHEES SAQLSNEEEH LDSNHGSVHS BACU001301/1-872 RLSKRKDHKK TNVEEEVKIP VVCALTHEES SAQLSNEEEH LDSNHGSVHS ENSBTAP00000015290/1-862 RLSKRKDHKK TDVEEEVKIP VVCALTHEES SAQLSNEEEH LDSTHGSVHS 401 450 ENSTTRP00000013981/1-860 LDADLLLPSG DPFSKSDNDM FKDGLRRAQS TDSLGTSGSL QSKALGYNYK ENSP00000262477/1-862 LDAGLLLPSG DPFSKSDNDM FKDGLRRAQS TDSLGTSGSL QSKALGYNYK bmy_08630T0/1-825 LDADLLLPSG DPFSKSDNDV FKDGLRRAQS TDSLGTSGSL QSKALGYNYK BACU001301/1-872 LDADLLLPSG DPFSKSDNDM FKDGLRRAQS TDSLGTSGSL QSKALGYNYK ENSBTAP00000015290/1-862 LDADLLLPSG DPFSKPDNDV FKDGLRRAQS TDSLGTSGSL QSKALGYNYK 451 500 ENSTTRP00000013981/1-860 AKSAGNLDES DFGPLVGADS VTENFDTASL GSLQMPSGFM LTKDQERAIK ENSP00000262477/1-862 AKSAGNLDES DFGPLVGADS VSENFDTASL GSLQMPSGFM LTKDQERAIK bmy_08630T0/1-825 AKSAGNLDES DFGPLVGADS VTENFDTASL GSLQMPSGFM LTKDQERAIK BACU001301/1-872 AKSAGNLDES DFGPLVGADS VTENFDTASL GSLQMPSGFM LTKDQERAIK ENSBTAP00000015290/1-862 AKSAGNLDES DFGPLVGADS VTENFDTASL GSLQMPSGFM LTKDQERAIK 501 550 ENSTTRP00000013981/1-860 AMTPEQEETA SLLSSVTQGM ESAYVSPSGY RLVSETEWNL LQKEVHNAGN ENSP00000262477/1-862 AMTPEQEETA SLLSSVTQGM ESAYVSPSGY RLVSETEWNL LQKEVHNAGN bmy_08630T0/1-825 AMTPEQEETA SLLSSVTQGM ESAYVSPSGY RLVSETEWNL LQKEVHNAGN BACU001301/1-872 AMTPEQEETA SLLSSVTQGM ESAYVSPSGY RLVSETEWNL LQKEVHNAGN ENSBTAP00000015290/1-862 AMTPEQEETA SLLSSVTQGM ESAYVSPSGY RLVSETEWNL LQKEIHNAGN 551 600 ENSTTRP00000013981/1-860 KLGRRCDMCS NYEKQLQGIQ IQEAETRDQV KKLQVMLRQA NDQLEKTMRD ENSP00000262477/1-862 KLGRRCDMCS NYEKQLQGIQ IQEAETRDQV KKLQLMLRQA NDQLEKTMKD bmy_08630T0/1-825 KLGRRCDMCS NYEKQLQGIQ IQEAETRDQV KKLQVMLRQA NDQLEKTMRD BACU001301/1-872 KLGRRCDMCS NYEKQLQGIQ IQEAETRDQV KKLQVMLRQA NDQLEKTMRD ENSBTAP00000015290/1-862 KLGRRCDMCS NYEKQLQGIQ IQEAETRDQV KKLQVMLRQA NDQLEKTMKD 601 650 ENSTTRP00000013981/1-860 KQELEDFIKQ STEDSSHQIS ALVLRAQASE ILLEELQQGF SQAKRDVQEQ ENSP00000262477/1-862 KQELEDFIKQ SSEDSSHQIS ALVLRAQASE ILLEELQQGL SQAKRDVQEQ bmy_08630T0/1-825 KQELEDFXKQ STEDSSHQXS ALVLRAQASE ILLEELQQGF SQAKRDVQEQ BACU001301/1-872 KQELEDFIKQ STEDSSHQIS ALVLRAQASE ILLEELQQGF SQAKRDVQEQ ENSBTAP00000015290/1-862 KQELEDFIKQ STEDSSHQIS ALVLRAQASE ILLEELQQGF SQAKRDVQEQ 651 700 ENSTTRP00000013981/1-860 MAVLMQSREQ VSEELVRLQK DNDSLQGKHS LHVSLQQAED FILPDTIEAL ENSP00000262477/1-862 MAVLMQSREQ VSEELVRLQK DNDSLQGKHS LHVSLQQAED FILPDTTEAL bmy_08630T0/1-825 MAVLMQSREQ VSEELVRLQK DNDSLQGKHS LHVSLQQAED FILPDTIEAL BACU001301/1-872 VAVLMQSREQ VSEELVRLQK DNDSLQGKHS LHVSLQQAED FILPDTIEAL ENSBTAP00000015290/1-862 MAVLMQSREQ VSEELVRLQK DNDSLQGKHS LHVSLQQAED FILPDTMEAL 701 750 ENSTTRP00000013981/1-860 RELVLKYREN IINVRTAADH VEEKLKAEIL FLKEQIQAEQ CLKENLEETL ENSP00000262477/1-862 RELVLKYRED IINVRTAADH VEEKLKAEIL FLKEQIQAEQ CLKENLEETL bmy_08630T0/1-825 RELVLKYREN IINVRTAADH MEEKLKAEIL FLKEQIQAEQ CLKENLEETL BACU001301/1-872 RELVLKYREN IINVRTAADH MEEKLKAEIL FLKEQIQAEQ CLKENLEETL ENSBTAP00000015290/1-862 RELVLKYREN IVNVRTAADH MEEKLKAEIL FLKEQIQAEQ CLKENLEETL 751 800 ENSTTRP00000013981/1-860 QLEIENCKEE IASISSLKAE LERIKVEKGQ LESTLREKSQ QLESLQEMKI ENSP00000262477/1-862 QLEIENCKEE IASISSLKAE LERIKVEKGQ LESTLREKSQ QLESLQEIKI bmy_08630T0/1-825 QLEIENCKEE IASISSLKAE LERIK----- LESTLREKSQ QLESLQEMKI BACU001301/1-872 QLEIENCKEE IASISSLKAE LERIKVEKGQ LESTLREKSQ QLESLQEMKI ENSBTAP00000015290/1-862 QLEIENCKEE IASISSLKAE LERIKVEKGQ LESTLREKSQ QLESLQEMKM 801 850 ENSTTRP00000013981/1-860 TLEEQLKKET AAKVTVEQLM FEEKNKAQRL QTELDVSEQV QRDFVKLSQT ENSP00000262477/1-862 SLEEQLKKET AAKATVEQLM FEEKNKAQRL QTELDVSEQV QRDFVKLSQT bmy_08630T0/1-825 TLEEQLKKET AAKVTVEQLM FEEKNKAQRL QTELDVSEQV QRDFVKLSQT BACU001301/1-872 TLEEQLKKET AAKVTVEQLM FEEKNKAQRL QTELDVSEQV QRDFVKLSQT ENSBTAP00000015290/1-862 TLEEQLKKET AAKVTVEQLM FEEKNKAQRL QTELDVSEQV QRDFVKLSQT 851 900 ENSTTRP00000013981/1-860 LQVQLERIRQ ADSLERIRAI LNDTKLTDIN QLPET ENSP00000262477/1-862 LQVQLERIRQ ADSLERIRAI LNDTKLTDIN QLPET bmy_08630T0/1-825 LQVQLERIRQ ADSLERIRAI LNDTKLTDIN QLPET BACU001301/1-872 LQVQLERIRQ ADSLERIRAI LNDTKLTDIN QLPET ENSBTAP00000015290/1-862 LQVQLERIRQ ADSLERIRAI LNDTKLTDIN QLPET