KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:08 2014 Check: 00 .. Name: ENSTTRP00000009222/1-654 Len: 663 Check: 660 Weight: 1.00 Name: ENSP00000356071/1-654 Len: 663 Check: 9020 Weight: 1.00 Name: ENSBTAP00000015295/1-654 Len: 663 Check: 9280 Weight: 1.00 Name: bmy_21573T0/1-639 Len: 663 Check: 840 Weight: 1.00 Name: BACU011763/1-575 Len: 663 Check: 912 Weight: 1.00 // 1 50 ENSTTRP00000009222/1-654 MSLAAYCIIC CRRMGTSTPP PKSNTYWRDV RNIIKFTGSL ILGGSLFITY ENSP00000356071/1-654 MSLAAYCVIC CRRIGTSTSP PKSGTHWRDI RNIIKFTGSL ILGGSLFLTY ENSBTAP00000015295/1-654 MSLAAYCVIC CRRMGTSTPP PKSSTYWRDI RNIIKFTGSL ILGGSLFITY bmy_21573T0/1-639 ---------- -------MAA VKGG------ -NIIKFTGSL ILGGSLFITY BACU011763/1-575 ---------- ---------- ---------- ---------- FLRGSLFITY 51 100 ENSTTRP00000009222/1-654 EVLALKKSLT LDTQVVEKEK MKSYIYVHTV SLDKRENHGI TYQARKELHK ENSP00000356071/1-654 EVLALKKAVT LDTQVVEREK MKSYIYVHTV SLDKGENHGI AWQARKELHK ENSBTAP00000015295/1-654 EVLALKKSLT LDTQVIEREK MKSYIYVHTV SLDKTENHGI TYQARKELHK bmy_21573T0/1-639 EVLALKKSLT LDTQVVEREK MKSYIYVHTV SLDKRENHGI TYQARKELHK BACU011763/1-575 EVLALKKSLT LDTQVVEREK MKSYIYVHTV SLDKRENHGI TYQARKELHK 101 150 ENSTTRP00000009222/1-654 AVRKVLATSA RILRGPFADT FSTIDIEDHE CAVWLLLRKS KSDDRAARLQ ENSP00000356071/1-654 AVRKVLATSA KILRNPFADP FSTVDIEDHE CAVWLLLRKS KSDDKTTRLE ENSBTAP00000015295/1-654 AVRKVLATSA RIFRGPFADT FSTVDIEDHD CAVWLLLRKS RSDDRAARLQ bmy_21573T0/1-639 AVRKVLATSA RILQGPFADT FSTIDVEDHE CAVWLLLRKS KSDDRAARLQ BACU011763/1-575 AVRKVLATSA RILQGPFADT FSTIDIEDHE CAVWLLLRKS KSDDRAARLQ 151 200 ENSTTRP00000009222/1-654 AVQEMAETRH WHDYQYRIIA QACDLRTLIG LARSKDSDLR FFLCPPPLPS ENSP00000356071/1-654 AVREMSETHH WHDYQYRIIA QACDPKTLIG LARSEESDLR FFLLPPPLPS ENSBTAP00000015295/1-654 AVQEMSEARH WHDYQYRIIA QACDMRTLTG LARSKDSDLR FFLRPPPLPS bmy_21573T0/1-639 AVQEMSETHH WHDYQYRIIA QACDLRTLIG LARSKDSDLR FFLRPPPLPS BACU011763/1-575 AVQEMSEARH WHDYQYRIIA QACDLRTLIG LARSKDSDLR FFLRPPPLPS 201 250 ENSTTRP00000009222/1-654 LKEXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXX---- -----XXXXX ENSP00000356071/1-654 LKEDSSTEEE LRQLLASLPQ TELDECIQYF TSLALS---- -----ESSQS ENSBTAP00000015295/1-654 LKEDSSTEEE LRHLLASLPQ TDLDECIQCF TALALS---- -----ESSQS bmy_21573T0/1-639 LKEDSSIEEE LRQLLASLPQ TDLDECIHLA TVCIMKVPCK FPEYFESYIL BACU011763/1-575 LKEDSSIEEE LRQLLASLPQ TDLDECIQYF TSLALS---- -----ESSQS 251 300 ENSTTRP00000009222/1-654 XXXXXGGLWC FGGNGLPYAE SFGEVPSATV EMFCLEALVK HSEIPTHCDK ENSP00000356071/1-654 LAAQKGGLWC FGGNGLPYAE SFGEVPSATV EMFCLEAIVK HSEISTHCDK ENSBTAP00000015295/1-654 LAAQKGGLWC FGGNGLPYAE SFGEVPSATV EMFCLEALVK HSEIPTHCDK bmy_21573T0/1-639 VLSNTGGLWC FGGNGLPYAE SFGEVPSATV EMFCLEALVK HSEIPTHCDK BACU011763/1-575 LAAQ------ ---------- ---------- ---------- ---IPTHCDK 301 350 ENSTTRP00000009222/1-654 IEANGGLQLL QRLYQLHKDC PKVQRNIMRI LGNMALNEHL HSTIVRSGWV ENSP00000356071/1-654 IEANGGLQLL QRLYRLHKDC PKVQRNIMRV IGNMALNEHL HSSIVRSGWV ENSBTAP00000015295/1-654 IEANGGLQLL QRLYQLHKDC PKVQRNIMRI LGNMALNEHL HSTIVRSGWV bmy_21573T0/1-639 IEANGGLQLL QKLYQLHKDC PNVQRNIMRI LGNMALNEHL HSTIVRSGWV BACU011763/1-575 IEANGGLQLL QKLYQLHKDC PNVQRNIMRI LGNMALNEHL HSTIVRSGWV 351 400 ENSTTRP00000009222/1-654 SILVEAIKSH HIMEASHAAR TLANLDRETV QDKYQDGVYV LHPQYRTSQP ENSP00000356071/1-654 SIMAEAMKSP HIMESSHAAR ILANLDRETV QEKYQDGVYV LHPQYRTSQP ENSBTAP00000015295/1-654 SILAEAIKSQ HIMEASHAAR TLANLDRETV PDKYHDGVYV LHPQYRTSQP bmy_21573T0/1-639 SILVEAIKSH DIMEASHAAR TLANLDRETV QDKYQDGVYV LHPQYRTSQP BACU011763/1-575 SILVEAIKSH DIMEASHAAR TLANLDRETV QDKYQDGVYV LHPQYRTSQP 401 450 ENSTTRP00000009222/1-654 IKADVLFIHG LMGAAFKTWR QQDNDQNLTG KVSEDETKYT TCWPKSWLAR ENSP00000356071/1-654 IKADVLFIHG LMGAAFKTWR QQDSEQAVIE KPMEDEDRYT TCWPKTWLAK ENSBTAP00000015295/1-654 IKADVLFIHG LMGAAFKTWR QQDNDQDLTE KVSEDETKYT TCWPKSWLAR bmy_21573T0/1-639 IKADVLFIHG LMGAAFKTWR QQDSDEDLTE KVSEDESKYT TCWPKSWLAR BACU011763/1-575 IKADVLFIHG LMGAAFKTWR QQDSDENLTE KVSEDESKYT TCWPKSWLAR 451 500 ENSTTRP00000009222/1-654 DCPALRIISV EYDTSLSDWR ARCPMERKSI AFRSNELLRK LRAAGVGDRP ENSP00000356071/1-654 DCPALRIISV EYDTSLSDWR ARCPMERKSI AFRSNELLRK LRAAGVGDRP ENSBTAP00000015295/1-654 DCPALRIISV EYDTSLSDWR ARCPTERKSI AFRSNELLRK LRAAGVGDRP bmy_21573T0/1-639 DCPALRIISV EYDTSLSDWR ARCPMERKSI AFRSNELLRK LRAAGVGDRP BACU011763/1-575 DCPALRIISV EYDTSLSDWR ARCPVERKSI AFRSNELLRK LRAAGVGDRP 501 550 ENSTTRP00000009222/1-654 MIWVSHSMGG LLVKKMLLEA SKKPEMSTII NNTRGIIFYS VPHHGSHLAE ENSP00000356071/1-654 VVWISHSMGG LLVKKMLLEA STKPEMSTVI NNTRGIIFYS VPHHGSRLAE ENSBTAP00000015295/1-654 VVWVSHSMGG LLVKKMLLEA SKRPEMNTII NNTRGIIFYS VPHHGSHLAE bmy_21573T0/1-639 MIWVSHSMGG LLVKKMLLEA SKKPEMSTII NNTRGIIFYS VPHHGSHLAE BACU011763/1-575 VIWVSHSMGG LLVKKMLLEA SKKPEMSTII NNTRGIIFYS VPHHGSHLAE 551 600 ENSTTRP00000009222/1-654 YSVNIRYLLF PSLEVKELSK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000356071/1-654 YSVNIRYLLF PSLEVKELSK DSPALKTLQD DFLEFAKDKN FQVLNFVETL ENSBTAP00000015295/1-654 YSVNIRYLLF PSLEVKELSK DSPALKTLQD DFLEFAKDKN FQVLSFVETL bmy_21573T0/1-639 YSVNIRYLLF PSLEVKELSK DSPALKTLQD DFLEFAKDKN FQVLSFVETL BACU011763/1-575 YSVNIRYLLF PSLEVKELSK DSPALKTLQD DFLEFAKDKN FQVLSFVETL 601 650 ENSTTRP00000009222/1-654 XXXXXXXXXX XXXXXXXXXL GIGDLIPVDV NHLNICKPKK KDAFLYQRTL ENSP00000356071/1-654 PTYIGSMIKL HVVPVESADL GIGDLIPVDV NHLNICKPKK KDAFLYQRTL ENSBTAP00000015295/1-654 PTYIGSMIKL HVVPLDSADL GLGDLIPVDV NHLNICKPKK KDAFLYQRTL bmy_21573T0/1-639 PTYIGSMIKL HVVPLESADL GIGDLIPVDV NHLNICKPKK KDAFLYQRTL BACU011763/1-575 PTYIGSMIKL HVVPLESADL GIGDLIPVDV NHLNICKPKK KDAFLYQRTL 651 700 ENSTTRP00000009222/1-654 QFIRDTLAKD LEN ENSP00000356071/1-654 QFIREALAKD LEN ENSBTAP00000015295/1-654 QFIRDALAKD LEN bmy_21573T0/1-639 QFIRDTLAKD LEN BACU011763/1-575 QFICDTLAKD LEN