KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:10 2014 Check: 00 .. Name: ENSP00000276654/1-859 Len: 930 Check: 5690 Weight: 1.00 Name: ENSBTAP00000015304/1-859 Len: 930 Check: 9545 Weight: 1.00 Name: bmy_00492T0/1-930 Len: 930 Check: 2305 Weight: 1.00 Name: ENSTTRP00000004069/1-832 Len: 930 Check: 223 Weight: 1.00 Name: BACU013166/1-669 Len: 930 Check: 1760 Weight: 1.00 // 1 50 ENSP00000276654/1-859 ---MACRWST KESPRWRSAL LLLFLAGVY- ---------G NGALAEHSEN ENSBTAP00000015304/1-859 ---MARRWNT KESPRWRSAL VLLFLAGVY- ---------G NRALAEHSEN bmy_00492T0/1-930 MFLRVRRYTY NNTPFKIDFS GQEQCKKIYC SSCDYFAFSG NGALAEHSEN ENSTTRP00000004069/1-832 ---------- ---------- ---------- ---------- NGALAEHSEN BACU013166/1-669 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000276654/1-859 VHISGVST-- -----ACGET PEQIRAPSGI ITSPGWPSEY PAKINCSWFI ENSBTAP00000015304/1-859 VHISGVST-- -----ACGET PEQIRAPSGI ITSPGWPSEY PARINCSWFI bmy_00492T0/1-930 VHISGVSTDC FDYLPACGET PEQIRVPSGI ITSPGWPSEY PARINCSWFI ENSTTRP00000004069/1-832 VHISGVST-- -----ACGET PEQIQVPSGI ITSPGWPSEY PAKINCSWFI BACU013166/1-669 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000276654/1-859 RANPGEIITI SFQDFDIQGS RRCNLDWLTI ETYKNIESYR ACGSTIPPPY ENSBTAP00000015304/1-859 RANPGEIITI SFQDFDIQGS RRCSLDWLTI ETYKNIESYR ACGSTIPPPY bmy_00492T0/1-930 RANPGEIITI SFQDFDIQGS RRCSLDWLTI ETYKNIESYR ACGSTIPPPY ENSTTRP00000004069/1-832 RANPGEIITI SFQDFDIQGS RRCSLDWLTI ETYKNIESYR ACGSTIPPPY BACU013166/1-669 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000276654/1-859 ISSQDHIWIR FHSDDNISRK GFRLAYF--- ---------- ---------- ENSBTAP00000015304/1-859 ISSQDHVWIR FHSDDSISRK GFRLAYF--- ---------- ---------- bmy_00492T0/1-930 ISSQDHVWIR FHSDDSISRK GFRLAYFSGV FLNKKKDMEQ NSIVFTAQSL ENSTTRP00000004069/1-832 ISSQDHVWIR FHSDDSISRK GFRLAYF--- ---------- ---------- BACU013166/1-669 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000276654/1-859 ---------- ---------- --------SG KSEEPNCACD QFRCGNGKCI ENSBTAP00000015304/1-859 ---------- ---------- --------SG KSEEPNCACD QFRCGNGKCI bmy_00492T0/1-930 RDSPSKQCPF NCDSILKAAE IEELEAKGSG KSEEPNCACD QFRCGNGKCI ENSTTRP00000004069/1-832 ---------- ---------- --------SG KSEEPNCACD QFRCGNGKCI BACU013166/1-669 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000276654/1-859 PEAWKCNNMD ECGDSSDEEI CAKEANPPTA AAFQPCAYNQ FQCLSRFTKV ENSBTAP00000015304/1-859 PAAWKCNNMD ECGDSSDEEI CAREANPPTS ASFQPCAYNQ FQCLSRFTKV bmy_00492T0/1-930 PAAWKCNNMD ECGDSSDEEI CAKEVNPPTS AAFQPCAYNQ FQCLSRFTKV ENSTTRP00000004069/1-832 PAAWKCNNMD ECGDSSDEEI CAKEVNPPTS ASFQPCAYNQ FQCLSRFTKV BACU013166/1-669 --------MD ECGDSSDEEI CAKEVNPPTS AAFQPCAYNQ FQGLSRFTKV 301 350 ENSP00000276654/1-859 YTCLPESLKC DGNIDCLDLG DEIDCDVPTC GQWLKYFYGT FNSPNYPDFY ENSBTAP00000015304/1-859 YTCLPESLKC DGNIDCLDLG DEIDCDVPTC GQWLKYFYGT FNSPNYPDFY bmy_00492T0/1-930 YTCLPESLKC DGNIDCLDLG DEIDCDVPTC GQWLKYFYGT FNSPNYPDFY ENSTTRP00000004069/1-832 YTCLPESLKC DGNIDCLDLG DEIDCDVPTC GQWLKYFYGT FNSPNYPDFY BACU013166/1-669 YTCLPESLQC DGNIDCLDLG DEIDCDVPTC GQWLKYFYGT FNSPNYPDFY 351 400 ENSP00000276654/1-859 PPGSNCTWLI DTGDHRKVIL RFTDFKLDGT GYGDYVKIYD GLEENPHKLL ENSBTAP00000015304/1-859 PPGSNCTWLI DTGDHRKVIL RFTDFKLDGT GYGDYVKIYD GLEENPHKLL bmy_00492T0/1-930 PPGSNCTWLI DTGDHRKVIL RFTDFKLDGT GYGDYVKIYD GLEENPHKLL ENSTTRP00000004069/1-832 PPGSNCTWLI DTGDHRKVIL RFTDFKLDGT GYGDYVKIYD GLEENPHKLL BACU013166/1-669 PPGSNCTWLI DTGDHRKVIL RFTDFKLDGT GYGDYVKIYD GLEENPHKLL 401 450 ENSP00000276654/1-859 RVLTAFDSHA PLTVVSSSGQ IRVHFCADKV NAARGFNATY QVDGFCLPWE ENSBTAP00000015304/1-859 RVLTAFDSHA PLTVVSSSGQ IRVHFCADKV NAARGFNATY QVDGFCLPWE bmy_00492T0/1-930 RVLTAFDSHA PLTVVSSSGQ IRVHFCADKV NAARGFNATY QVDGFCLPWE ENSTTRP00000004069/1-832 RVLTAFDSHA PLTVVSSSGQ IRVHFCADKV NAARGFNATY QVDGFCLPWE BACU013166/1-669 RVLTAFDSHA PLTVVSSSGQ IRVHFCADKV NAARGFNATY QVDGFCLPWE 451 500 ENSP00000276654/1-859 IPCGGNWGCY TEQQRCDGYW HCPNGRDETN CTMCQKEEFP CSRNGVCYPR ENSBTAP00000015304/1-859 IPCGGNWGCY TEQQRCDGYW HCPNGRDEIN CTVCQKEEFP CSRNGVCYPR bmy_00492T0/1-930 IPCGGNWGCY TEQQRCDGYW HCPNGRDEIN CTMCQKEEFP CSRNGVCYPR ENSTTRP00000004069/1-832 IPCGGNWGCY TEQQRCDGYW HCPNGRDEIN CTMCQKEEFP CSRNGVCYPR BACU013166/1-669 IPCGGNWGCY TGQQRCDGYW HCPNGRDEIN CTMCQKEEFP CSRNGVCYPR 501 550 ENSP00000276654/1-859 SDRCNYQNHC PNGSDEKNCF FCQPGNFHCK NNRCVFESWV CDSQDDCGDG ENSBTAP00000015304/1-859 SDRCNYQNHC PNGSDEKNCF FCQPGNFHCK NNRCVFESWV CDSQDDCGDG bmy_00492T0/1-930 SDRCNYQNHC PNGSDEKNCF FCQPGNFHCK NNRCVFESWV CDSQDDCGDG ENSTTRP00000004069/1-832 SDRCNYQNHC PNGSDEKNCF FCQPGNFHCK NNRCVFESWV CDSQDDCGDG BACU013166/1-669 SDRCNYQNHC PNGSDEKNCF FCQPGNFHCK NNRCVFESWV CDSQDDCGDG 551 600 ENSP00000276654/1-859 SDEENCPVIV PTRVITAAVI GSLICGLLLV IALGCTCKLY SLRMFERRSF ENSBTAP00000015304/1-859 SDEENCPVIV PTRVITAAVI GSLICGLLLV IALGCTCKLY SLRMFERRSF bmy_00492T0/1-930 SDEENCPVIV PTRVITAAVI GSLICGLLLV IALGCTCKLY SLRMFERRSF ENSTTRP00000004069/1-832 SDEENCPVIV PTRVITAAVI GSLICGLLLV IALGCTCKLY SLRMFERRSF BACU013166/1-669 SDEENCPVIV PTRVITAAVI GSLICGLLLV IALGCTCKLY SLRMFERRSF 601 650 ENSP00000276654/1-859 ETQLSRVEAE LLRREAPPSY GQLIAQGLIP PVEDFPVCSP NQASVLENLR ENSBTAP00000015304/1-859 ETQLSRVEAE LLRREAPPSY GQLIAQGLIP PVEDFPVCSP NQASVLENLR bmy_00492T0/1-930 ETQLSRVEAE LLRREAPPSY GQLIAQGLIP PVEDFPVCPP NQASVLENLR ENSTTRP00000004069/1-832 ETQLSRVEAE LLRREAPPSY GQLIAQGLIP PVEDFPVCPP NQASVLENLR BACU013166/1-669 ETQLSRVEAE LLRREAPPSY GQLIAQGLIP PVEDFPVCPP NQASVLENLR 651 700 ENSP00000276654/1-859 LAVRSQLGFT SVRLPMAGRS SNIWNRIFNF ARSRHSGSLA LVSADGDEVV ENSBTAP00000015304/1-859 LAVRSQLGFT SIRLPMAGRS SNIWNRIFNF ARSRHSGSLA LVSADGDEVV bmy_00492T0/1-930 LAVRSQLGFT SIRLPMAGRS SNIWNRIFNF ARSRHSGSLA LVSADGDEVA ENSTTRP00000004069/1-832 LAVRSQLGFT SIRLPMAGRS SNIWNRIFNF ARSRHSGSLA LVSADGDEVA BACU013166/1-669 LAVRSQPGFT SIRLPMAGRS SNIWNRIFNF ARSRHSGSLA LVSADGDEVA 701 750 ENSP00000276654/1-859 PSQSTSREPE RNHTHRSLFS VESDDTDTEN ERRDMAGASG GVAAPLPQKV ENSBTAP00000015304/1-859 PSQSTSREPE RNHTHRSLFS VESDDTDTEN ERRDTAGASG GVTAPLPQKV bmy_00492T0/1-930 PSQSTSREPE RNHTHRSLFS VESDDTDTEN ERRDTVGASG GVAAPLPQKV ENSTTRP00000004069/1-832 PSQSTSREPE RNHTHRSLFS VESDDTDTEN ERRDTVGASG GVAAPLPQKV BACU013166/1-669 PSQSTNREPE RNHTHRSLFS VQSDDTDTEN ERRDTVGASG GVAAPLPQKI 751 800 ENSP00000276654/1-859 PPTTAVEATV GACASSSTQS TRGGHADNGR DVTSVEPPSV SPARHQLTSA ENSBTAP00000015304/1-859 PPTTAVEATV GASGSSSTQS TRGGHTETGR DVTSVEPPSV SPARHQLTSA bmy_00492T0/1-930 PPTTAVEATV GASGSSSTQN PRGGHTETGR DVTSAEPPSV SPARHQLTSA ENSTTRP00000004069/1-832 PPTTAVEATV GASGSSSTQN TRGGHTETGR DVTSAEPPSV SPARHQLTSA BACU013166/1-669 PATTAVEATV GASGSSSTQN TRGGHTETGR DVTSAEPPSV SPARHQLTSA 801 850 ENSP00000276654/1-859 LSRMTQGLRW VRFTLGRSSS LSQNQSPLRQ LDNGVSGRED DDDVEMLIPI ENSBTAP00000015304/1-859 LSRMTQGLRW VRFTLGRSSS SNQNQSPLRQ LDNGVNGREE DDDVEMLIPV bmy_00492T0/1-930 LSRMTQGLRW VRFTLGRSSS VSQNQSPLRQ LDNGVNGREE DDDVEMLIPV ENSTTRP00000004069/1-832 LSRMTQGLRW VRFTLGRSSS VSQNQSPLRQ LDNGVSGREE DDDVEMLIPV BACU013166/1-669 LSRMTQGLRW VRFTLGQSRS VSQNQSPLRQ LDNGVNGREE DDDVEMLIPV 851 900 ENSP00000276654/1-859 SDGSSDFDVN DCSRPLLDLA SDQGQGLRQP YNATNPGVRP SNRDGPCERC ENSBTAP00000015304/1-859 SEGASDFDVN DCSRPLLDLA SDQGQGFRQP YSGTNPGVRP SSRDGPCERC bmy_00492T0/1-930 SEGASDFDVN DCSRPLLDLA SDQGQRFRQP YNAADPGVRP SNRDGPCERC ENSTTRP00000004069/1-832 SEGASDFDVN DCSRPLLDLA SDQGQRFRQP YSAADPGVRP SNRDGPCERC BACU013166/1-669 SEGASDFDAN DCSRPLLDLA SDQGQRFRQP YSAADPGVRP SNRDGPCERC 901 950 ENSP00000276654/1-859 GIVHTAQIPD TCLEVTLKNE TSDDEALLLC ENSBTAP00000015304/1-859 GIVHTAQIPD SCLEATLKTE TSDDEALLLC bmy_00492T0/1-930 GIVHTAQIPD SCLEATLKNE TSDDEALLLC ENSTTRP00000004069/1-832 GIVHTAQIPD SCLEATLKNE TSDDEALLLC BACU013166/1-669 GIVHTAQIPD SCLEATLKNE TGDDEAL---