KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:19 2014 Check: 00 .. Name: ENSTTRP00000006956/1-418 Len: 505 Check: 1865 Weight: 1.00 Name: BACU017851/1-400 Len: 505 Check: 632 Weight: 1.00 Name: bmy_19369T0/1-467 Len: 505 Check: 8080 Weight: 1.00 Name: ENSP00000414516/1-418 Len: 505 Check: 357 Weight: 1.00 Name: ENSBTAP00000015327/1-386 Len: 505 Check: 4965 Weight: 1.00 // 1 50 ENSTTRP00000006956/1-418 ---------- ---------- ---------- ------MSVA FAAPRQRGKG BACU017851/1-400 ---------- ---------- ---------- ------MSVA FAAPRQRGKG bmy_19369T0/1-467 PPRVLDVVRP ERPASFPQFA VHPERSGLAD SGDGGNMSVA FAAPRQRGKG ENSP00000414516/1-418 ---------- ---------- ---------- ------MSVA FAAPRQRGKG ENSBTAP00000015327/1-386 ---------- ---------- ---------- ------MSVA FAAPRQRGKG 51 100 ENSTTRP00000006956/1-418 EITPAAIQKM LDENNHLIQC IMDYQNKGKT SECSQYQQML HTNLVYLATI BACU017851/1-400 EITPAAIQKM LDENNHLIQC IMDYQNKGKT SECSQYQQML HTNLVYLATI bmy_19369T0/1-467 EITPAAIQKM LDENNHLIQC IMDYQNKGKT SECSQYQQML HTNLVYLATI ENSP00000414516/1-418 EITPAAIQKM LDDNNHLIQC IMDSQNKGKT SECSQYQQML HTNLVYLATI ENSBTAP00000015327/1-386 EITPAAIQKM LDENNHLIQC IMDYQNKGKT SECSQYQQML HTNLVYLATI 101 150 ENSTTRP00000006956/1-418 ADSNQNMQSL LPAPPTQNMP MGPGGMNQSG PPPPPRSHNM PSDGMVAGGP BACU017851/1-400 ADSNQNMQSL LPAPPTQNMP MGPGGMNQSG PPPPPRSHNM PSDGMVAGGP bmy_19369T0/1-467 ADSNQNMQSL LPAPPTQNMP MGPGGMNQSG PPPPPRSHNM PSDGMVAGGP ENSP00000414516/1-418 ADSNQNMQSL LPAPPTQNMP MGPGGMNQSG PPPPPRSHNM PSDGMVGGGP ENSBTAP00000015327/1-386 ADSNQNMQSL LPAPPTQNMP MGPGGMSPSG PPPPPRAHNM PSDGMVGGGP 151 200 ENSTTRP00000006956/1-418 PAPHMQNQMN GQMPGPNHMP MQGPGPNQLN MTNSSMNMPS SSHGSMGGYS BACU017851/1-400 PAPHMQNQMN GQMPGPNHMP MQGPGPNQLN MTNSSMNMPS SSHGSMGGYS bmy_19369T0/1-467 PAPHMQNQMN GQMPGPNHMP MQGPGPNQLN MTNSSMNMPS SSHGSMGGYS ENSP00000414516/1-418 PAPHMQNQMN GQMPGPNHMP MQGPGPNQLN MTNSSMNMPS SSHGSMGGYN ENSBTAP00000015327/1-386 PAPHMQNQMN GQMPGPNHIP MQGPGPNQLN MTNSSMNMPS SSHGSMGGYN 201 250 ENSTTRP00000006956/1-418 HSVPSSQSMP VQNQMTMSQG QPMGNYGPRP NMNIQPNQGP MMHQQPPSQQ BACU017851/1-400 HSVPSSQSMP VQNQMTMSQG QPMGNYGPRP NMNIQPNQGP MMHQQPPSQQ bmy_19369T0/1-467 HSVPSSQSMP VQNQMTMSQG QPMGNYGPRP NMNIQPNQGP MMHQQPPSQQ ENSP00000414516/1-418 HSVPSSQSMP VQNQMTMSQG QPMGNYGPRP NMSMQPNQGP MMHQQPPSQQ ENSBTAP00000015327/1-386 HSVPSSQSMP VQNQMTMSQG QPMGNYGPRP NMSMQPNQGP VMHQQPPSQQ 251 300 ENSTTRP00000006956/1-418 YNMPQGGGQH YQGQQPPMGM MGQVNQGNHM MAQRQIPPYR PPQQXXXXXX BACU017851/1-400 YSMPQGGGQH YQGQQPPMGM MGQVNQGNHM IAQRQIPPYR PPQQGPPQQY bmy_19369T0/1-467 YNMPQG---- ---------- ---------- ---------- ----GPPQQY ENSP00000414516/1-418 YNMPQGGGQH YQGQQPPMGM MGQVNQGNHM MGQRQIPPYR PPQQGPPQQY ENSBTAP00000015327/1-386 YNMPQGGGQH YQGQQPPMGM MSQVNQGNHM LGQRQIPPYR PPQQGPPQQY 301 350 ENSTTRP00000006956/1-418 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX HNDYGYQQPS YPEQGYDRPY BACU017851/1-400 SGQEDYYGDQ YSHGGQGPPE GMNQQYYPDG HNDYGYQQPS YPEQGYDRPY bmy_19369T0/1-467 SGQEDYYGDQ YSHGGQGPPE GMNQQYYPDG HNDYGYQQPS YPEQGYDRPY ENSP00000414516/1-418 SGQEDYYGDQ YSHGGQGPPE GMNQQYYPDG HNDYGYQQPS YPEQGYDRPY ENSBTAP00000015327/1-386 SGQEDYYGEQ YSHGGQGPPE GMNQQYYPD- ---------- ---------- 351 400 ENSTTRP00000006956/1-418 EDSSQHYYEG GNSQYGQQQD AYQGPPPQQG YPAQQQQYPG QQGYPGQQQG BACU017851/1-400 EDSSQHYYEG GNSQYGQQQD AYQGPPPQQG YPPQQQQYPG QQGYPGQQQG bmy_19369T0/1-467 EDSSQHYYEG GNSQYGQQQD AYQGPPPQQG YPPQQQQYPG QQGYPGQQQG ENSP00000414516/1-418 EDSSQHYYEG GNSQYGQQQD AYQGPPPQQG YPPQQQQYPG QQGYPGQQQG ENSBTAP00000015327/1-386 ---------- GNSQYGQQQD AYQGPPPQQG YPP-QQQYPG QQGYPGQQQG 401 450 ENSTTRP00000006956/1-418 YGPSQGGPGP QYPNYPQGQG QQYGGYRPAQ PGPPQPPQQR PYGYDQGQ-- BACU017851/1-400 Y-----GNGL LQFILVTKKC DDY------- -----SFIIR KWIFNVYF-- bmy_19369T0/1-467 YGPSQGGPGP QYPNYPQGQG QQYGGYRPAQ PGPPQPPQQR PYGYDQDVSE ENSP00000414516/1-418 YGPSQGGPGP QYPNYPQGQG QQYGGYRPTQ PGPPQPPQQR PYGYDQGQ-- ENSBTAP00000015327/1-386 YGPSQGGPGP QYPNYPQGQG QQYGGYRPAQ PGPPQPPQQR PYGYDQGQ-- 451 500 ENSTTRP00000006956/1-418 ---------- ---------- ---------- ---------- ---------Y BACU017851/1-400 ---------- ---------- ---------- ---------- ---------S bmy_19369T0/1-467 LFMVDNREPQ LIMTKLSLSL QIVYLPENLI TEQKTCSLLA DMDFYLYVGF ENSP00000414516/1-418 ---------- ---------- ---------- ---------- ---------Y ENSBTAP00000015327/1-386 ---------- ---------- ---------- ---------- ---------Y 501 550 ENSTTRP00000006956/1-418 GNYQQ BACU017851/1-400 KNYF- bmy_19369T0/1-467 MNFDD ENSP00000414516/1-418 GNYQQ ENSBTAP00000015327/1-386 GNYQQ