KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:21 2014 Check: 00 .. Name: ENSP00000362768/1-1068 Len: 1122 Check: 6851 Weight: 1.00 Name: ENSBTAP00000015333/1-1068 Len: 1122 Check: 3931 Weight: 1.00 Name: ENSTTRP00000001816/1-1067 Len: 1122 Check: 8836 Weight: 1.00 Name: bmy_09296T0/1-835 Len: 1122 Check: 895 Weight: 1.00 Name: BACU015515/1-1068 Len: 1122 Check: 6708 Weight: 1.00 // 1 50 ENSP00000362768/1-1068 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015333/1-1068 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001816/1-1067 ---------- ---------- ---------- ---------- ---------- bmy_09296T0/1-835 DLFEEKRGCR PSKRRRAAAP DFRALLARVV VGSAPRREKG AGGSVTAPPA BACU015515/1-1068 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362768/1-1068 ----MFEDKP HAEGAAVVAA AGEALQALCQ ELNLDEGSAA EALDDFTAIR ENSBTAP00000015333/1-1068 ----MDEDDP HAEGAAVVAA AGEALQALCQ ELNLDEGSAA EALDDFTAIR ENSTTRP00000001816/1-1067 ----MDEDDP HSEGAAVVAA AGEALQALCQ ELNLDEGSAA EALDDFTAIR bmy_09296T0/1-835 APEGMDEDDP HAEGAAVVAA AGEALQALCQ ELNLDEGSAA EALDDFTAIR BACU015515/1-1068 ----MDEDDP HAEGAAVVAA AGEALQALCQ ELNLDEGSAA EALDDFTAIR 101 150 ENSP00000362768/1-1068 GNYSLEGEVT HWLACSLYVA CRKSIIPTVG KGIMEGNCVS LTRILRSAKL ENSBTAP00000015333/1-1068 GNYSLEGEVI HWLACSLYVA CRKSIIPTVG KGIMEGNCVS LTRILRSAKL ENSTTRP00000001816/1-1067 GNYSLEGEVI HWLACSLYVA CRKSIIPTVG KGIMEGNCVS LTRILRSAKL bmy_09296T0/1-835 GNYSLE---- ---------- ---------- ---------- ---------- BACU015515/1-1068 GNYSLEGEVI HWLACSLYVA CRKSIIPTVG KGIMEGNCVS LTRILRSAKL 151 200 ENSP00000362768/1-1068 SLIQFFSKMK KWMDMSNLPQ EFRERIERLE RNFEVSTVIF KKYEPIFLDI ENSBTAP00000015333/1-1068 SLIQFFSKMK KWMDMSNLPQ EFRERIERLE RNFEVSTVIF KKFEPIFLDI ENSTTRP00000001816/1-1067 SLIQFFSKMK KWMDMSNLPQ EFRERIERLE RNFEVSTVIF KKFEPIFLDI bmy_09296T0/1-835 ----FFSKMK KWMDMSNLPQ EFRERIERLE RNFEVSTVIF KKFEPIFLDI BACU015515/1-1068 SLIQFFSKMK KWMDMSNLPQ EFRERIERLE RNFEVSTVIF KKFEPIFLDI 201 250 ENSP00000362768/1-1068 FQNPYEEPPK LPRSRKQRRI PCSVKDLFNF CWTLFVYTKG NFRMIGDDLV ENSBTAP00000015333/1-1068 FQNPYEEPPK LPRSRKQRRI PCSVKELFNF CWTLFVYTKG NFRMIGDDLV ENSTTRP00000001816/1-1067 FQNPYEEPPK LPRSRKQRRI PCSVKELFNF CWTLFVYTKG NFRMIGDDLV bmy_09296T0/1-835 FQNPYEEPPK LPRSRKQRRI PCSVKELFNF CWTLFVYTKG NFRMIGDDLV BACU015515/1-1068 FQNPYEEPPK IPRSRKQRRI PCSVKELFNF CWTLFVYTKG NFRMIGDDLV 251 300 ENSP00000362768/1-1068 NSYHLLLCCL DLIFANAIMC PNRQDLLNPS FKGLPSDFHT ADFTASEEPP ENSBTAP00000015333/1-1068 NSYHLLLCCL DLIFANAIMC PNRQELLNPS FKGLPSNFQT ADFRASEEPP ENSTTRP00000001816/1-1067 NSYHLLLCCL DLIFANAIMC PNRRDLLNPS FKGLPSDFHT ADFRASEEPP bmy_09296T0/1-835 NSYHLLLCCL DLIFANAIMC PNRRDLLNPS FKGLPSDFHT ADFRASEEPP BACU015515/1-1068 NSYHLLLCCL DLIFANAIMC PNRRDLLNPS FKGLPSDFHT ADFRASEEPP 301 350 ENSP00000362768/1-1068 CIIAVLCELH DGLLVEAKGI KEHYFKPYIS KLFDRKILKG ECLLDLSSFT ENSBTAP00000015333/1-1068 CIIPVLCELH DGLLVEAKGI KEHYFKPYIS KLFDRKILKG ECLLDLCSFT ENSTTRP00000001816/1-1067 CIIPVLCELH DGLLVEAKGI KEHYFKPYIS KLFDRKILKG ECLLDLSSFT bmy_09296T0/1-835 CIIPVLCELH DGLLVEAKGI KEHYFKPYIS KLFDRKILKG ECLLDLSSFT BACU015515/1-1068 CIIPVLCELH DGLLVEAKGI KEHYFKPYIS KLFDRKILKG ECLLDLSSFT 351 400 ENSP00000362768/1-1068 DNSKAVNKEY EEYVLTVGDF DERIFLGADA EEEIGTPRKF TRDTPLGKLT ENSBTAP00000015333/1-1068 DNSKAVNKEY EEYVLTVGDF DERIFLGADA EEEIGTPRKF TGDGPLGKLT ENSTTRP00000001816/1-1067 DNSKAVNKEY EEYVLTVGDF DERIFLGADA EEEIGTPRKF TGDAPLGKLT bmy_09296T0/1-835 DNSKAVNKEY EEYVLTVGDF DERIFLGADA EEEIGTPRKF TGDAPLGKLT BACU015515/1-1068 DNSKAVNKEY EEYVLTVGDF DERIFLGADA EEEIGTPRKF TGDAPLGKLT 401 450 ENSP00000362768/1-1068 AQANVEYNLQ QHFEKKRSFA PSTPLTGRRY LREKEAVITP VASATQSVSR ENSBTAP00000015333/1-1068 AQANVECNLQ HHFEKKTSFA PSTPLTGRRY LREKEAVITP VASATQSVSR ENSTTRP00000001816/1-1067 AQANVECNLQ QHFEKKTSFA PSTPLTGRRY LREKEAVITP VASATQSVSR bmy_09296T0/1-835 AQANVECNLQ QHFEKKTSFA PSTPLTGRRY LREKEAVITP VASATQSVSR BACU015515/1-1068 AQANVECNLQ QHFEKKTSFA PSTPLTGRRY LREKEAVITP VASATQSVSR 451 500 ENSP00000362768/1-1068 LQSIVAGLKN APSDQLINIF ESCVRNPVEN IMKILKGIGE TFCQHYTQST ENSBTAP00000015333/1-1068 LQSIVAGLKN APSEQLINIF ESCMRNPMEN IMKIVKGIGE TFCQHYTQST ENSTTRP00000001816/1-1067 LQSIVAGLKN APSEQLINIF ESCMRNPMEN IMKTVKLIGE TFCQHYTQST bmy_09296T0/1-835 LQSIVAGLKN APSEQLVNIF ESCMRNPMEN IMKTVKVIGE TFCQHYTQST BACU015515/1-1068 LQSIVAGLKN APSEQLVNIF ESCMRNPMEN IMKTVKVIGE TFCQHYTQST 501 550 ENSP00000362768/1-1068 DEQPGSHIDF AVNRLKLAEI LYYKILETVM VQETRRLHGM DMSVLLEQDI ENSBTAP00000015333/1-1068 DEQPGSHIDF AVNRLKLAEI LYYKILETVM VQETRRLHGM DMSVLLEQDI ENSTTRP00000001816/1-1067 DEQPGSHIDF AVNRLKLAEI LYYKILETVM VQETRRLHGM DMSVLLEQDI bmy_09296T0/1-835 DEQPGSHIDF AVNRLKLAEI LYYKILETVM VQETRRLHGM DMSVLLEQDI BACU015515/1-1068 DEQPGSHIDF AVNRLKLAEI LYYKILETVM VQETRRLHGM DMSVLLEQDI 551 600 ENSP00000362768/1-1068 FHRSLMACCL EIVLFAYSSP RTFPWIIEVL NLQPFYFYKV IEVVIRSEEG ENSBTAP00000015333/1-1068 FHHSLMACCL EIVLFAYSSP RTFPWIIEVL NLRPFYFYKV IEVVIRSEEG ENSTTRP00000001816/1-1067 FHHSLMACCL EIVLFAYSSP RTFPWIIQVL NLRPFYFYKV IEVVIRSEEG bmy_09296T0/1-835 FHHSLMACCL EIVLFAYSSP RTFPWIIQVL NLRPFYFYK- ---------- BACU015515/1-1068 FHHSLMACCL EIVLFAYSSP RTFPWIIQVL NLRPFYFYKV IEVVIRSEEG 601 650 ENSP00000362768/1-1068 LSRDMVKHLN SIEEQILESL AWSHDSALWE ALQVSANKVP TCEEVIFPNN ENSBTAP00000015333/1-1068 LSRDMVKHLN SIEEQILESL AWSHDSALWE ALQASENRVP TCEEVIFPNN ENSTTRP00000001816/1-1067 LSRDMVKHLN SIEEQILESL AWSHDSALWE ALQASANRVP TCEEVIFPNN bmy_09296T0/1-835 ---------- ---------- ---------- ---------- ----VIFPNN BACU015515/1-1068 LSRDMVKHLN SIEEQILESL AWSHDSALWE ALQASANRVP TCEEVIFPNN 651 700 ENSP00000362768/1-1068 FETGNGGNVQ GHLPLMPMSP LMHPRVKEVR TDSGSLRRDM QPLSPISVHE ENSBTAP00000015333/1-1068 FETGSGGNVQ GHLPMMPMSP LMHPRVKEVR TDSGSLRKDM QPLSPISVHE ENSTTRP00000001816/1-1067 FETGNGGNVQ GHLPMMPMSP LMHPRVKEVR TDSGSLRKDT QPLSPISVHE bmy_09296T0/1-835 FETGNGGNVQ GHLPMMPVSP LMHPRVKEVR TDSGXLRKDT QPLSPISVHE BACU015515/1-1068 FETGNGGNVQ GHLPMMPMSP LMHPRVKEVR TDSGSLRKDT QPLSPISVHE 701 750 ENSP00000362768/1-1068 RYSSPTAGSA KRRLFGEDPP KEMLMDKIIT EGTKLKIAPS SSITAENVSI ENSBTAP00000015333/1-1068 RYSSPTAGSA KRRLFGEDPP KEILMDRIIT EGTKLKIAPS SSITAENISI ENSTTRP00000001816/1-1067 RYSSPTAGSA KRRLFGEDPP KEMLMDRIIT EGTKLKIAPS SSITAENISI bmy_09296T0/1-835 RYSSPTAGSA KRRLFGEDPP KEMLMDRIIT EGTKLKIAPS SSITAENISI BACU015515/1-1068 RYSSPTAGSA KRRLFGEDPP KEMLMDRIIT EGTKLKIAPS SSITAENISI 751 800 ENSP00000362768/1-1068 LPGQTLLTMA TAPVTGTTGH KVTIPLHGVA NDAGEITLIP LSMNTNQESK ENSBTAP00000015333/1-1068 SPGHSLLTMA TAIVAGTTGH KVTIPLHGIA NDAGEITLIP ISMNTTQESK ENSTTRP00000001816/1-1067 SPGQSLLTMA TAIVTGTTGH KVTIPLHGIA NDAGEITLIP ISMNTTQESK bmy_09296T0/1-835 SPGQSLLTMA TAIVTGTTGH KVTIPLHGIA NDAGEITLIP ISMNTTQESK BACU015515/1-1068 SPGQSLLTMA TAIVTGTTGH KVTIPLHGIA NDAGEITLIP ISMNTTQESK 801 850 ENSP00000362768/1-1068 VKSPVSLTAH SLIGASPKQT NLTKAQEVHS TGINRPKRTG SLALFYRKVY ENSBTAP00000015333/1-1068 VESPVSLTAQ SLIGASPKQT HLTKAQEVHP IGISKPKRTG SLALFYRKVY ENSTTRP00000001816/1-1067 VESPVSLTAQ SLIGASPKQT HLTKAQEVHS VGISKPKRTG SLALFYRKVY bmy_09296T0/1-835 VKSPVSLTAQ SLIGASPKQT HLTKAQE--- ---------- ---------- BACU015515/1-1068 VESPVSLTAQ SLIGASPKQT HLTKAQEVHS VGISKPKRTG SLALFYRKVY 851 900 ENSP00000362768/1-1068 HLASVRLRDL CLKLDVSNEL RRKIWTCFEF TLVHCPDLMK DRHLDQLLLC ENSBTAP00000015333/1-1068 HLASVRLRDL CLKLDVSNEL RRKIWTCFEF TLVHCPDLMK DRHLDQLLLC ENSTTRP00000001816/1-1067 HLASVRLRDL CLKLDVSNEL RRKIWTCFEF TLVHCPDLMK DRHLDQLLLC bmy_09296T0/1-835 ---------- ---------- ---------- ---------- ---------- BACU015515/1-1068 HLASVRLRDL CLKLDVSNEL RRKIWTCFEF TLVHCPDLMK DRHLDQLLLC 901 950 ENSP00000362768/1-1068 AFYIMAKVTK EERTFQEIMK SYRNQPQANS HVYRSVLLKS IPREVVAYNK ENSBTAP00000015333/1-1068 AFYIMAKVTK EERTFQEIMK SYRNQPQANS HVYRSVLLKS IPREVVAYSK ENSTTRP00000001816/1-1067 AFYIMAKVTK EERTFQEIMK SYRNQPQANS HVYRSVLLKS IPREVVTYNK bmy_09296T0/1-835 ---------- ---------- ---------- ---------- ---------- BACU015515/1-1068 AFYIMAKVTK EERTFQEIMK SYRNQPQANS HVYRSVLLKS IPREVVTYSK 951 1000 ENSP00000362768/1-1068 NINDDFEMID CDLEDATKTP DCSSGPVKEE RGDLIKFYNT IYVGRVKSFA ENSBTAP00000015333/1-1068 NLNGDFEMTD CDLEDATKTP DCSSGPVKEE RGDLIKFYNT IYVGRVKSFA ENSTTRP00000001816/1-1067 NLNGDFEMTD CXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09296T0/1-835 ---------- ---------- ---------- ---------- ---------- BACU015515/1-1068 NLNGDFEMTD CDLEDATKTP DCSSGPVKEE RGDLIKFYNT IYVGRVKSFA 1001 1050 ENSP00000362768/1-1068 LKYDLANQDH MMDAPPLSPF PHIKQQPGSP RRISQQHSIY ISPHKNGSGL ENSBTAP00000015333/1-1068 LKYDLSNQDH VMEAPPLSPF PHIKQQPGSP RRISQQHSIY VSPHKNGSGL ENSTTRP00000001816/1-1067 XXXXXXXXXX XMEAPPLSPF PHIKQQPGSP RRISQQHSIY VSPHKNGSCL bmy_09296T0/1-835 ---------- -MEAPPLSPF PHIKQQPGSP RRISQQHSIY VSPHKNGSGL BACU015515/1-1068 LKYDLSNQDH VMEAPPLSPF PHIKQQPGSP RRISQQHSIY VSPHKNGSGL 1051 1100 ENSP00000362768/1-1068 TPRSALLYKF NGSPSKSLKD INNMIRQGEQ RTKKRVIAID SDAESPAKRV ENSBTAP00000015333/1-1068 TPRSALLYKF NGSPSKSLKD INNMIRQGEQ RTKKRAITID GDAESPAKRL ENSTTRP00000001816/1-1067 TPRSALLYKF NGSPS-SLKD INNMIRQGEQ RTKKRAIAID GDAESPAKRL bmy_09296T0/1-835 TPRSALLYRF NGSPSKSLKD INNMIRQGEQ RTKKRAIAID GDAESPAKRL BACU015515/1-1068 TPRSALLYKF NGSPSKSLKD INNMIRQGEQ RTKKRAIAID GDAESPAKRL 1101 1150 ENSP00000362768/1-1068 CQENDDVLLK RLQDVVSERA NH ENSBTAP00000015333/1-1068 CQENDDVLLK RLQDVVSERA NH ENSTTRP00000001816/1-1067 CQENDDVLLK RLQDVVSERA NH bmy_09296T0/1-835 CQENDDVLLK RLQDVVSERA NH BACU015515/1-1068 CQENDDVLLK RLQDVVSERA NH