KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:24 2014 Check: 00 .. Name: ENSBTAP00000015345/1-623 Len: 1210 Check: 8287 Weight: 1.00 Name: ENSP00000385957/1-623 Len: 1210 Check: 1077 Weight: 1.00 Name: ENSTTRP00000000543/1-623 Len: 1210 Check: 8451 Weight: 1.00 Name: bmy_20193T0/1-475 Len: 1210 Check: 7823 Weight: 1.00 Name: BACU007929/1-1210 Len: 1210 Check: 2656 Weight: 1.00 // 1 50 ENSBTAP00000015345/1-623 MEYKSEGKEK YQHSLNLLNK IKSMKDLAEM IDVVIIAEGE AFPCHRLVLA ENSP00000385957/1-623 MECKIEGKEK YQHSLNLLNK IQNMKELAEM IDVVLTAEGE KFPCHRLVLA ENSTTRP00000000543/1-623 MECKTEGKEK YQHSLNLLNK IKNMKELAEM IDVVLIAEGE KFPCHRLVLA bmy_20193T0/1-475 MECKTEGKEK YQHSLNLLNK IKNMKELAEM IDVVLIAEGE KFPCHRLVLA BACU007929/1-1210 MECKTEGKEK YQHSLNLLNK IKNMKELAEM IDVVLIAEGE KFPCHRLVLA 51 100 ENSBTAP00000015345/1-623 AFSPYFKAMF TCGLLECTQR EVVLHDITAE SVAVLLRYMY HAALEVSNAN ENSP00000385957/1-623 AFSPYFKAMF TCGLLECNQR EVILYDITAE SVSVLLNYMY NAALEINNAN ENSTTRP00000000543/1-623 AFSPYFKAMF TCGLLECTQR EVVLYDITAE SVSVILNYMY HAALEISNAN bmy_20193T0/1-475 AFSPYFKAMF TCGLLECTQR EVVLYDITAE SVSVILNYMY HAALEISNAN BACU007929/1-1210 AFSPYFKAMF TCGLLECTQR EVILYDITAE SVSVILNYMY HAALEISNAN 101 150 ENSBTAP00000015345/1-623 VQTVAMAAYF MQMEDVFQAC QKHMMAHMDA SNCVGIYYFA KQIGAEDLAD ENSP00000385957/1-623 VQTVAMAAYF MQMEEVFSVC QKYMMDHMDA SNCLGIYYFA KQIGAEDLSD ENSTTRP00000000543/1-623 VQTVAMAAYF MQMEEVFSVC QKYMMDHMDA SNCLGIYHFA KQIGAEDLAD bmy_20193T0/1-475 VQTVAMAAYF MQMEEVFSVC QKYMMDHMDA SNCVGIYHFA KQIGAEDLAD BACU007929/1-1210 VQTVAMAAYF MQMEEVFSVC QKYMMDHMDA SNCVGIYHFA KQIGAEDLAD 151 200 ENSBTAP00000015345/1-623 QSRKYLYRHF AEVSLHEEIL EVEVHQLLTL IQSDDLNVSR EESILDLVLR ENSP00000385957/1-623 RSKKYLYQHF AEVSLHEEIL EIEVHQFLTL IKSDDLNISR EESILDLVLR ENSTTRP00000000543/1-623 QSKKYLYQHF AEVSLHEEIL EIEVHQLLTL IKSDDLNISR EESILDLVLR bmy_20193T0/1-475 QSKKYLYQHF AEVSLHEEIL EIEVHQFLTL IKSDDLNISR EESILDLVLR BACU007929/1-1210 QSKRYLYQHF AEVSLHEEIL EIEVHQFLTL IKSDDLNISR EESILDLVLR 201 250 ENSBTAP00000015345/1-623 WVNHRPDRRT EHLVELLKQV RLQLVSPSFL RQALRRNTVL LCDANCIDLI ENSP00000385957/1-623 WVNHNKELRT VHLVELLKQV RLELVNPSFL RQALRRNTML LCDADCVDII ENSTTRP00000000543/1-623 WVNHNRELRT EHLVELLKQV RLQLVNPSFL RQALKRNTML LCDANCIDII bmy_20193T0/1-475 WVNHNRELRT EHLAELLKQV RLQLVNPSSL RQALKRNTML LCDANCIDII BACU007929/1-1210 WVNHNRELRT EHLAELLKQV RLQLVNPSSL RQALKRNTML LCDANCIDII 251 300 ENSBTAP00000015345/1-623 QNAFKAIKTP QPHALSLRYG METTSLLLCI GTNASGIRSR HRNYGDASFC ENSP00000385957/1-623 QNAFKAIKTP QQHSLNLRYG METTSLLLCI GNNSSGIRSR HRSYGDASFC ENSTTRP00000000543/1-623 QNAFKAIKTP QQHSLNLRYG METTSLLLCI GTNSSGIRSR HRNYGDASFC bmy_20193T0/1-475 QNAFKAIKTP QQHSLNLRYG METTSLLLCI GNNSSGIRSR RRNYGDASFC BACU007929/1-1210 QNAFKAIKTR QEHSLNLRYG METTSLLLCI GNNSSGIRSR RRNYGDASFC 301 350 ENSBTAP00000015345/1-623 YDPVSRKTCF ISSPKYGEGL GTVCTGVVME DNSVIVAGEA SASKLSRQKS ENSP00000385957/1-623 YDPVSRKTYF ISSPKYGEGL GTVCTGVVME NNTIIVAGEA SASKLSRQKN ENSTTRP00000000543/1-623 YDPALRKTYF ISSPKYGEGL GTVCTGVVME NNTIIVAGEA SASKLSRQKS bmy_20193T0/1-475 YDPASRKTYF ISSPKYGEGL GTVCTGVVME NNTIIVAGEA SVSKLSRQKS BACU007929/1-1210 YDPASRKTYF ISSPKYGEGL GTVCTGVVME NNTIIVAGEA SVSKLSRQKS 351 400 ENSBTAP00000015345/1-623 KSVEIYRYHD RGNQFWEKLC TAEFRELYAL GAVHNDLYVI GGQMKVKNQY ENSP00000385957/1-623 KNVEIYRYHD RGNQFWEKLC TAEFRELYAL GSIHNDLYVI GGQMKIKNQY ENSTTRP00000000543/1-623 KNVEIYRYHD RGNQFWEKLC TTEFRELYAL GTIHNDLYVI GGQMKIKNQY bmy_20193T0/1-475 KNVEIYRYHD RGNQFWEKLC TTEFRELYAL GTVHNDLYVI GGQMKIKNQY BACU007929/1-1210 KNVEIYRYHD RGNQFWEKLC TTEFRELYAL GTVHNDLYVI GGQMKIKNQY 401 450 ENSBTAP00000015345/1-623 LITNCVDKYS VERDTWKRVS PLPLQLACHA VATVNNKLYV IGGWTPQ--- ENSP00000385957/1-623 LITNCVDKYS VERDNWKRVS PLPLQLACHA VVTVNNKLYV IGGWTPQ--- ENSTTRP00000000543/1-623 LITNCVDKYS VERDTWKRVS PLPLQLACHA VVTVNNKLYV IGGWTPQ--- bmy_20193T0/1-475 LITNCVDKYS VERDTWKRVS PLPLQLACHA VVTVNNKLYV IGGWTPQVKK BACU007929/1-1210 LITNCVDKYS VERDTWKRVS PLPLQLACHA VVTVNNKLYV IGGWTPQVKK 451 500 ENSBTAP00000015345/1-623 ---------- ---------- -MDLPDEEPD RLSNKLLRYD PSQDQWTERA ENSP00000385957/1-623 ---------- ---------- -MDLPDEEPD RLSNKLLQYD PSQDQWSVRA ENSTTRP00000000543/1-623 ---------- ---------- -MDLPDEEPD RLSNKLLKYD PSQDLWTEQA bmy_20193T0/1-475 FPVYLTG--- ---------- -MAVLSLAAL LKNVVVVEY- ---------- BACU007929/1-1210 FPVYLTGMAV LSLAALLKNA VMDLPDEEPD RLSNKLLKYD PSQDQWTEQA 501 550 ENSBTAP00000015345/1-623 PMKYSKYRFS TAVVNSEIYV LGGIGCVGRD KGQVRKCLDA VEIYNPDGDF ENSP00000385957/1-623 PMKYSKYRFS TAVVNSEIYV LGGIGCVGQD KGQVRKCLDV VEIYNPDGDF ENSTTRP00000000543/1-623 PMKYSKYRFS TAVVNSEIYV LGGIGCIGRD KGQVRKCLDT VEIYNPDGDF bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 PMKYSKYRFS TAVVNSEIYV LGGIGCTGRD KGQVRKCLDV VEIYNPDGDF 551 600 ENSBTAP00000015345/1-623 WREGPPMPVP LLALRSNSTS AGAVDGKLYV CGGFHGADRH EVICKEILEL ENSP00000385957/1-623 WREGPPMPSP LLSLRTNSTN AGAVDGKLYV CGGFHGADRH EVISKEILEL ENSTTRP00000000543/1-623 WREGPPMPSP LLSLRTNSTN AGAVDGKLYV CGGFHGADRH EIISKEILEL bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 WREGPPMPSP LLSLRTNSTN AGAVDGKLYV CGGFHGADRH EVISKEILEL 601 650 ENSBTAP00000015345/1-623 DPWENQWNVV AVDVLMHDSY DVCLVARMNP RDLIPPPSDL VEE------- ENSP00000385957/1-623 DPWENQWNVV AINVLMHDSY DVCLVARMNP RDLIPPPSDL VEE------- ENSTTRP00000000543/1-623 DPWENQWNVV AVNALMHDSY DVCLVARKNP RDLIPPPSES VEE------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 DPWENQWNVV AVNALMHDSY DVCLVARKNP RDLIPPPSES VEEVKFLEVI 651 700 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 KPFCVILPEI QKPERKIQFK EKVLWTAITL FIFLVCCQIP LFGIMSSDSA 701 750 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 DPFYWMRVIL ASNRGTLMEL GISPIVTSGL IMQLLAGAKI IEVGDTPKDR 751 800 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 ALFNGAQKLF GMIITIGQSI VYVMTGMYGD PSEMGAGICL LITIQLFVAG 801 850 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 LIVLLLDELL QKGYGLGSGI SLFIATNICE TIVWKAFSPT TVNTGRGMEF 851 900 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 EGAIIALFHL LATRTDKVRA LREAFYRQNL PNLMNLIATI FVFAVVIYFQ 901 950 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 GFRVDLPIKS ARYRGQYNTY PIKLFYTSNI PIILQSALVS NLYVISQMLS 951 1000 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 ARFSGNLLVS LLGTWSDTSS GGPARAYPVG GLCYYLSPPE SFGSVLEDPV 1001 1050 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 HAVVYIVFML GSCAFFSKTW IEVSGSSAKD VAKQLKEQQM VMRGHRETSM 1051 1100 ENSBTAP00000015345/1-623 ---------- ---------- ---------- --GGGR---- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- --GNEH---- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- --GGGH---- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 VHELNRYIPT AAAFGGLCIG ALSVLADFLG AIGSGTGILL AVTIIYQYFE 1101 1150 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 IFVKEQSEWW SRATMPQLCI VEPGRASGHR AEDPEVLALQ FLPLSLNLFS 1151 1200 ENSBTAP00000015345/1-623 ---------- ---------- ---------- ---------- ---------- ENSP00000385957/1-623 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000543/1-623 ---------- ---------- ---------- ---------- ---------- bmy_20193T0/1-475 ---------- ---------- ---------- ---------- ---------- BACU007929/1-1210 MSLWALSWGL SCWASQKRPA TGDLQAFPGP TVWDREGQSL TASGSCWIKC 1201 1250 ENSBTAP00000015345/1-623 ---------- ENSP00000385957/1-623 ---------- ENSTTRP00000000543/1-623 ---------- bmy_20193T0/1-475 ---------- BACU007929/1-1210 DLLFFQERQG