KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:55:24 2014 Check: 00 .. Name: ENSTTRP00000014754/1-775 Len: 782 Check: 4098 Weight: 1.00 Name: bmy_16188T0/1-741 Len: 782 Check: 6940 Weight: 1.00 Name: ENSP00000430075/1-780 Len: 782 Check: 7519 Weight: 1.00 Name: ENSBTAP00000015348/1-620 Len: 782 Check: 4456 Weight: 1.00 // 1 50 ENSTTRP00000014754/1-775 MNISVLYTVS QSPHSLLSLP FYCAILESRI SATMLLLKLS G----IDDAT bmy_16188T0/1-741 MNVSVFYSVS QSSLQSPVSS FLLCYPRIKN PSTMSLLKLP A----IDDAT ENSP00000430075/1-780 MNVRIFYSVS QSPHSLLSLL FYCAILESRI SATMPLFKLP AEEKQIDDAM ENSBTAP00000015348/1-620 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014754/1-775 RSFAEKVFAS EVKDEGGHHE ISPFDVDEIC PILHDEMRKH LFQLEALSTP bmy_16188T0/1-741 RSFAEKVFAS EVKDEGGRHE ISPFDVDEVC PILHHEIREH LFQLEALSTP ENSP00000430075/1-780 RNFAEKVFAS EVKDEGGRQE ISPFDVDEIC PISHHEMQAH IFHLETLSTS ENSBTAP00000015348/1-620 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000014754/1-775 TGGR--RKKR YFGQRTISLS VPQSETSSTK LSHIDEYISS SPTYETVPDF bmy_16188T0/1-741 TEGRRPRKKR FFGQKTISLS VPQSETSSTT LPHIDEYSSP SLTYQTVPDF ENSP00000430075/1-780 TEAR--RKKR FQGRKTVNLS IPLSETSSTK LSHIDEYISS SPTYQTVPDF ENSBTAP00000015348/1-620 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000014754/1-775 QRVQITGDYS SGVTVEDFEM VCKGLYRALC IREKYMQKSF QRFPKTPSQY bmy_16188T0/1-741 QRVQITGDYS SGVTVEDFEM VCKGLYRALC IREKYMQKSF QRFPKTPSQY ENSP00000430075/1-780 QRVQITGDYA SGVTVEDFEI VCKGLYRALC IREKYMQKSF QRFPKTPSKY ENSBTAP00000015348/1-620 ---------- --VTVEDFEM VCKGLYRALC IREKYMQKSF QRFPKTPSKY 201 250 ENSTTRP00000014754/1-775 LRNIEGEASV ANESFYPVFT PPMKKREDPF RTDNLPENLG YHLKMKDGVV bmy_16188T0/1-741 LRNIEGEAWV PNESFSPVFT PPMKKREDPF RTDNLPENLG YHLKMKDGVV ENSP00000430075/1-780 LRNIDGEAWV ANESFYPVFT PPVKKGEDPF RTDNLPENLG YHLKMKDGVV ENSBTAP00000015348/1-620 LRNIDGEAWV EKENFYPVFT PPMKKGEDPF RTDNLPENLG YQLKMKDGVV 251 300 ENSTTRP00000014754/1-775 YIYPNEEAAS KEEPKPLPYP NLDTFLDDMN FLLALIARGP VKTYTHRRLK bmy_16188T0/1-741 YIYPNEEAAS KEEPKPLPYP NLDTFLDDMN FLLALIARGP VKTYTHRRLK ENSP00000430075/1-780 YVYPNEAAVS KDEPKPLPYP NLDTFLDDMN FLLALIAQGP VKTYTHRRLK ENSBTAP00000015348/1-620 YVYPNEEAAS KDEPKPLPYP NLDTFLDDMN FLLALIAQGP VKTYTHRRLK 301 350 ENSTTRP00000014754/1-775 FLSSKFQVHQ MLNEMDELKE LKSNPHRDFY NCRKVDTHIH AAACMNQKHL bmy_16188T0/1-741 FLSSKFQVHQ MLNEMDELKE LKSNPHRDFY NCRKVDTHIH AAACMNQKHL ENSP00000430075/1-780 FLSSKFQVHQ MLNEMDELKE LKNNPHRDFY NCRKVDTHIH AAACMNQKHL ENSBTAP00000015348/1-620 FLSSKFQVHQ MLNEMDELKE LKNNPHRDFY NCRKVDTHIH AAACMNQKHL 351 400 ENSTTRP00000014754/1-775 LRFIKKSYQV DADRVVYSTK EKNLTLKELF AKLKMHPYDL TVDSLDVHAG bmy_16188T0/1-741 LRFIKKSYQV DADRVVYSTK EKNLTLKELF AKLKMHPYDL TVDSLDVHAG ENSP00000430075/1-780 LRFIKKSYQI DADRVVYSTK EKNLTLKELF AKLKMHPYDL TVDSLDVHAG ENSBTAP00000015348/1-620 LRFIKKSYQI DADRVVYSTK EKNLTLKELF AKLKMHPYDL TVDSLDVHAG 401 450 ENSTTRP00000014754/1-775 RQTFQRFDKF NDKYNPVGAS ELRDLYLKTD NYINGEYFAT IIKEVGADLV bmy_16188T0/1-741 RQTFQRFDKF NDKYNPVGAS ELRDIYLKTD NYINGEYFAT IIKEVGADLV ENSP00000430075/1-780 RQTFQRFDKF NDKYNPVGAS ELRDLYLKTD NYINGEYFAT IIKEVGADLV ENSBTAP00000015348/1-620 RQTFQRFDKF NDKYNPVGAS ELRDLYLKTD NYINGEYFAT IIKEVGADLV 451 500 ENSTTRP00000014754/1-775 DAKYQHTEPR LSIYGRSPDE WSKLSTWFVR NHIYCPNMTW MIQVPRIYDV bmy_16188T0/1-741 DAKYQHTEPR LSIYGRSPDE WSKLSTWFVR NHIYCPNMTW MIQVPRIYDV ENSP00000430075/1-780 EAKYQHAEPR LSIYGRSPDE WSKLSSWFVC NRIHCPNMTW MIQVPRIYDV ENSBTAP00000015348/1-620 EAKYQHAEPR LSIYGRSPEE WSKLSTWFVQ NRVYCPNMTW MIQVPRIYDV 501 550 ENSTTRP00000014754/1-775 FRSKNFLPHF GKMLENIFMP VFEATINPQA HPDLSVFLKH ITGFDSVDDE bmy_16188T0/1-741 FRSKNFLPHF GKMLENIFMP VFEATINPQA HPDLSVFLKH ITGFDSVDDE ENSP00000430075/1-780 FRSKNFLPHF GKMLENIFMP VFEATINPQA DPELSVFLKH ITGFDSVDDE ENSBTAP00000015348/1-620 FRSKNFLPHF GKMLENVFMP VFEATINPQA HPDLSVFLKH ITGFDSVDDE 551 600 ENSTTRP00000014754/1-775 SKHSGHMFSS KSPKPQEWTM EKNPSYTYYA YYMYANITVL NSLRKKRCMN bmy_16188T0/1-741 SKHSGHMFSS KSPKPQEWTM AKNPSYTYYA YYMYANIMVL NSLRKERGMN ENSP00000430075/1-780 SKHSGHMFSS KSPKPQEWTL EKNPSYTYYA YYMYANIMVL NSLRKERGMN ENSBTAP00000015348/1-620 SKHSGHMFSS KSPKPQDWTM EKNPSYTYYT YYMYANIMVL NSLRKERGMN 601 650 ENSTTRP00000014754/1-775 TFLFLPICGA AGALSLLMTE FLTS-KISQG LNLXXSPVLQ YLFFLAQIPI bmy_16188T0/1-741 TFLFRPHCGE AGALTHLMTA FMTADNISHG LNLKKSPVLQ YLFFLAQIPI ENSP00000430075/1-780 TFLFRPHCGE AGALTHLMTA FMIADDISHG LNLKKSPVLQ YLFFLAQIPI ENSBTAP00000015348/1-620 TFLFRPHCGE AGALTHLMTA FMTADNISHG LNLKKSPVLQ YLFFLAQIPI 651 700 ENSTTRP00000014754/1-775 AMSPLSNNSL FLEYAKNPFL DFFQKGLMIS LSTDDPMQFH FTKEPLMEEY bmy_16188T0/1-741 AMSPLSNNSL FLEYAKNPFL DFLQKGLMIS LSTDDPMQFH FTK------- ENSP00000430075/1-780 AMSPLSNNSL FLEYAKNPFL DFLQKGLMIS LSTDDPMQFH FTKEPLMEEY ENSBTAP00000015348/1-620 AMSPLSNNSL FLEYARNPFL DFLQKGLMIS LSTDDPMQFH FTKEPLMEEY 701 750 ENSTTRP00000014754/1-775 AIAAQVFKLS TCDMCEVARN SVLQCGISHE EKVKFLGDNY LEEGPTGNDI bmy_16188T0/1-741 ---------- ---------- ---------- EKAKFLGDNY LEEGPTGNDI ENSP00000430075/1-780 AIAAQVFKLS TCDMCEVARN SVLQCGISHE EKVKFLGDNY LEEGPAGNDI ENSBTAP00000015348/1-620 AIAAQVFKLS TCDMCEVARN SVLQCGISHQ EKVRFLGNNY LEEGPAGNDI 751 800 ENSTTRP00000014754/1-775 RKTNVAQIRM AYRYETWCYE LNLIAEGSKS GE bmy_16188T0/1-741 RKTNVAQIRM AYRYETWCYE LNLIAEGIKS GE ENSP00000430075/1-780 RRTNVAQIRM AYRYETWCYE LNLIAEGLKS TE ENSBTAP00000015348/1-620 RKTNVAQIRM AYRYETWCYE LNLIAEGIKS GE