KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:29 2014 Check: 00 .. Name: ENSTTRP00000006174/1-487 Len: 487 Check: 6923 Weight: 1.00 Name: bmy_09740T0/1-370 Len: 487 Check: 1280 Weight: 1.00 Name: BACU004776/1-370 Len: 487 Check: 1706 Weight: 1.00 Name: ENSP00000298630/1-486 Len: 487 Check: 2239 Weight: 1.00 Name: ENSBTAP00000015362/1-375 Len: 487 Check: 2169 Weight: 1.00 // 1 50 ENSTTRP00000006174/1-487 MRSGAERRGS SAAAPPGSPP TGRARPAGPD APPAPPPPAA GQPRARDTGD bmy_09740T0/1-370 ---------- ---------- ---------- ---------- ---------- BACU004776/1-370 ---------- ---------- ---------- ---------- ---------- ENSP00000298630/1-486 MRSGAERRGS SAAASPGSPP PGRARPAGSD APSALPPPAA GQPRARDSGD ENSBTAP00000015362/1-375 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006174/1-487 ARAQPRPLFP WSKWKKRMGS SMSAATARRP VFDDKEDVNL DHFQILRAIG bmy_09740T0/1-370 ---------- ---------- ---------- ---------- ---------- BACU004776/1-370 ---------- ---------- ---------- ---------- ---------- ENSP00000298630/1-486 VRSQPRPLFQ WSKWKKRMGS SMSAATARRP VFDDKEDVNF DHFQILRAIG ENSBTAP00000015362/1-375 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006174/1-487 KGSFGKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09740T0/1-370 ---------- -------MFA MKYMNKQQCI ERDEVRNVFR ELEILQEIEH BACU004776/1-370 ---------- -------MYA MKYMNKQQCI ERDEVRNVFR ELEILQEIEH ENSP00000298630/1-486 KGSFGKVCIV QKRDTEKMYA MKYMNKQQCI ERDEVRNVFR ELEILQEIEH ENSBTAP00000015362/1-375 ------VCIV QKRDTEKMYA MKYMNKQQCI ERDEVRNVFR ELEILQEIEH 151 200 ENSTTRP00000006174/1-487 XXXXXXXYSF QDEEDMFMVV DLLPGGDLRY HLQQNVQFSE DTVRLYVCET bmy_09740T0/1-370 VFLVNLWYSF QDEEDMFMVV DLLPGGDLRY HLQQNVQFSE DTVRLYICEM BACU004776/1-370 IFLVNLWYSF QDEEDMFMVV DLLPGGDLRY HLQQNVQFSE DTVRLYVCEM ENSP00000298630/1-486 VFLVNLWYSF QDEEDMFMVV DLLLGGDLRY HLQQNVQFSE DTVRLYICEM ENSBTAP00000015362/1-375 VFLVNLWYSF QDEEDMFMVV DLLLGGDLRY HLQQNVQFSE DTVRLYVCEM 201 250 ENSTTRP00000006174/1-487 ALALDYLRSQ HIIHRDVKPD NILLDERGHA HLTDFNIATI IKDGERATAL bmy_09740T0/1-370 ALALDYLRSQ HIIHRDVKPD NILLDERGHA HLTDFNIATI IQDGERATAL BACU004776/1-370 ALALDYLRSQ HIIHRDVKPD NILLDERGHA HLTDFNIATI IKDGERATAL ENSP00000298630/1-486 ALALDYLRGQ HIIHRDVKPD NILLDERGHA HLTDFNIATI IKDGERATAL ENSBTAP00000015362/1-375 ALALDYLRGQ HIIHRDVKPD NILLDERGHA HLTDFNIATI IKDGERATAL 251 300 ENSTTRP00000006174/1-487 AGTKPYMAPE IFQSFVNGGT GYSFEVDWWS VGVMAYELLR GWXXXXXXXX bmy_09740T0/1-370 AGTKPYMAPE IFQSFVSGGT GYSFEVDWWS VGVMAYELLR GWRPYDIHSG BACU004776/1-370 AGTKPYMAPE IFQSFVSGGT GYSFEVDWWS VGVMAYELLR GWRPYDIHSG ENSP00000298630/1-486 AGTKPYMAPE IFHSFVNGGT GYSFEVDWWS VGVMAYELLR GWRPYDIHSS ENSBTAP00000015362/1-375 AGTKPYMAPE IFQSFVNGGT GYSFEVDWWS VGVMAYELLR GWRPYDIHSS 301 350 ENSTTRP00000006174/1-487 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09740T0/1-370 NAAESLVQLF STVSVQYVPT WSKEMVALLR KLLTVNPKHR VSSLQAMQAA BACU004776/1-370 NAAESLVQLF STVSVQYVPT WSKEMVALLR KLLTVSPRHR VSSLRDVQAA ENSP00000298630/1-486 NAVESLVQLF STVSVQYVPT WSKEMVALLR KLLTVNPEHR LSSLQDVQAA ENSBTAP00000015362/1-375 SAVQSLVQLF STVSVQYVPA WSKETVALLR KLLTVNPKHR VSSLQDMRAA 351 400 ENSTTRP00000006174/1-487 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09740T0/1-370 PALADVPWTE LSEKKVEPGF VPNKGRLHCD PTFELEEMIL ESRPLHKKKK BACU004776/1-370 PALADVLWTE LSEKKVEPGF VPNKGRLHCD PTFELEEMIL ESRPLHKKKK ENSP00000298630/1-486 PALAGVLWDH LSEKRVEPGF VPNKGRLHCD PTFELEEMIL ESRPLHKKKK ENSBTAP00000015362/1-375 PALAGVLWAE LSEKKVEPGF VPNKGRLHCD PTFELEEMIL ESRPLHKKKK 401 450 ENSTTRP00000006174/1-487 XXXXXXXXXX XXXXXXXEND YLQDCLDAIQ QDFVIFNREK LKRSQDPTSE bmy_09740T0/1-370 RLAKNRSRDS SRDSSQSEND RLQDCLDAIQ QDFVIFNREK LKRSQDPTSE BACU004776/1-370 RLAKNRSRDS SRDSSQSEND RLQDCLDAIQ QDFVIFNREK LKRSQDPTSE ENSP00000298630/1-486 RLAKNKSRDN SRDSSQSEND YLQDCLDAIQ QDFVIFNREK LKRSQDLPRE ENSBTAP00000015362/1-375 RLAKSRSRDS SRDSCPSEND YLQDCLDAIQ QDFVIFNREK LKRSQD---- 451 500 ENSTTRP00000006174/1-487 PLPAPEPGEG AEALADGEGA RSALRVCGAI CPSAGSG bmy_09740T0/1-370 PLPAPEPGEG AEALADGEGA RSALHVCGTI CPSAGSS BACU004776/1-370 PLPAPEPGEG AEALADGEGA RSALHVCGTI CPSAGSS ENSP00000298630/1-486 PLPAPESRDA AEPVED-EAE RSALPMCGPI CPSAGSG ENSBTAP00000015362/1-375 --PTPEPRDA AEALVDSEGV RPALPACGAI CPSAGSS