KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:32 2014 Check: 00 .. Name: ENSTTRP00000002571/1-892 Len: 895 Check: 9110 Weight: 1.00 Name: ENSBTAP00000015385/1-895 Len: 895 Check: 7560 Weight: 1.00 Name: ENSP00000442600/1-895 Len: 895 Check: 9410 Weight: 1.00 Name: bmy_06010T0/1-846 Len: 895 Check: 8938 Weight: 1.00 Name: BACU002397/1-881 Len: 895 Check: 5631 Weight: 1.00 // 1 50 ENSTTRP00000002571/1-892 MRMSVALSLL LPLWGRTFLL LLSVAVTQSR WPSEPSEAVR DWENQLEASM ENSBTAP00000015385/1-895 MRMSVGSSLP LPLWGRTFLL LLSVAVTQSH WPSEPSEAVR DWENQLEASM ENSP00000442600/1-895 MRMSVGLSLL LPLSGRTFLL LLSVVMAQSH WPSEPSEAVR DWENQLEASM bmy_06010T0/1-846 ---------- ---------- ---------- ---------- ---------M BACU002397/1-881 MRMSVALSLL LPLWGRTFLL LLSVAVTQSR WPSEPSEAVR DWENQLEASM 51 100 ENSTTRP00000002571/1-892 HSVLSDLHEA VPTVVGIPDG TAVVGRSFRV TIPTDLIASN GEVIKVSAAG ENSBTAP00000015385/1-895 HSALSDLHET VPTVVGIPDG TAVVGRSFRV TIPTDLIASN GEVIKVSAAG ENSP00000442600/1-895 HSVLSDLHEA VPTVVGIPDG TAVVGRSFRV TIPTDLIASS GDIIKVSAAG bmy_06010T0/1-846 HSVLSDLHEA VPTVVGIPDG TAVVGRSFRV TIPTDLIASN GEVIKVSAAG BACU002397/1-881 HSVLSDLHEA VPTVV----- ---------X TIPTDLIASN GEVIKVSAAG 101 150 ENSTTRP00000002571/1-892 KETLPSWLQW DPQSHTLEGL PLDTDKGVHY ISVSTARLGA NGSHVPQTSS ENSBTAP00000015385/1-895 KEALPSWLHW DPQSHTLEGL PLDTDKGVHY ISVSAARLGA NGSHVPQTSS ENSP00000442600/1-895 KEALPSWLHW DSQSHTLEGL PLDTDKGVHY ISVSATRLGA NGSHIPQTSS bmy_06010T0/1-846 KEALPSWLQW DPQSHTLEGL PLDTDKGVHY ISVSAARLGA NGSHVPQTSS BACU002397/1-881 KEALPSWLQW DPQSHTLEGL PLDTDKGVHY ISVSAARLGA NGSHVPQTSS 151 200 ENSTTRP00000002571/1-892 VFSVEVYPED HSEPQSVRAA SPDPGEVVSS VCAADEPVTV LTVILDADLT ENSBTAP00000015385/1-895 VFSIEVYPED HSEPQSLRAA SPDPGEVVSL VCAADEPVTV LTVILDADLT ENSP00000442600/1-895 VFSIEVYPED HSELQSVRTA SPDPGEVVSS ACAADEPVTV LTVILDADLT bmy_06010T0/1-846 VFSIEVYPED HSEPQSVRAA SPDPGEVVSS VCAADEPVTV LTVILDADLT BACU002397/1-881 VFSIEVYPED HSEPQSVRAA SPDPGEVVSS VCAADEPVTV LTVILDADLT 201 250 ENSTTRP00000002571/1-892 KMTPKQRIDL LHRMRSFSEV ELHNMKLVPV VNNRLFDMSA FMAGPGNAKK ENSBTAP00000015385/1-895 KMTPKQRIDL LRRMRGFSEV EPHNMKLVPV VNNRLFDMSA FMAGPGNAKK ENSP00000442600/1-895 KMTPKQRIDL LHRMRSFSEV ELHNMKLVPV VNNRLFDMSA FMAGPGNAKK bmy_06010T0/1-846 KMTPKQRIDL LHRMRSFSEV ELHNMKLVPV VNNRLFDMSA FMAGPGNAKK BACU002397/1-881 KMTPKQRIDL LHRMRSFSEV ELHNMKLVPV VNNRLFDMSA FMAGPGNAKK 251 300 ENSTTRP00000002571/1-892 VVENGALLSW KLGCSLNQNS VPDIRGVEVP AREGAMSAQL GYPVVGWHIA ENSBTAP00000015385/1-895 VVENGALLSW KLGCALNQNS VPDIRGVEVP AREGAMSAQL GYPVVGWHIA ENSP00000442600/1-895 VVENGALLSW KLGCSLNQNS VPDIHGVEAP AREGAMSAQL GYPVVGWHIA bmy_06010T0/1-846 VVENGALLSW KLGCSLNQNS VPDIRGVEVP AREGAMSAQL GYPVVGWHIA BACU002397/1-881 VVENGALLSW KLGCSLNQNS VPDIRGVEVP AREGAMSAQL GYPVVGWHIA 301 350 ENSTTRP00000002571/1-892 NKKPPLPKRI RRQIHATPTP VTAIGPPTTA IQEPPSRIVP TPTSPAIAPP ENSBTAP00000015385/1-895 NKKPSLPKRI RRQIHATPTP VTAIGPPTTA IQEPPSRIVP TPTSPAIAPP ENSP00000442600/1-895 NKKPPLPKRV RRQIHATPTP VTAIGPPTTA IQEPPSRIVP TPTSPAIAPP bmy_06010T0/1-846 NKKPPLPKRI RRQIHATPTP VTAIGPPTTA IQEPPSRIVP TPTSPAIAPP BACU002397/1-881 NKKPPLPKRI RRQIHATPTP VTAIGPPTTA IQEPPSRIVP TPTSPAIAPP 351 400 ENSTTRP00000002571/1-892 TETMTPPVRD PVPGKPTVTI RTRGAIIQTP TLGPIQPTRV SEAGTTVPGQ ENSBTAP00000015385/1-895 TETMAPPVRD PVPGKPTVTI RTRGAIIQTP TLGPIQPTRV SEAGTTVPSQ ENSP00000442600/1-895 TETMAPPVRD PVPGKPTVTI RTRGAIIQTP TLGPIQPTRV SEAGTTVPGQ bmy_06010T0/1-846 TETMIPPVRD PVPGKPTVTI RTRGAIIQTP TLGPIQPTRV SEAGTTVPGQ BACU002397/1-881 TETMIPPVRD PVPGKPTVTI RTRGAIIQTP TLGPIQPTRV SEAGTTVPGQ 401 450 ENSTTRP00000002571/1-892 IRPTMTIPGY VEPTAVATPP TITTKKPRVS TPKPATPSTD SSTTTTRRPT ENSBTAP00000015385/1-895 IRPTMTIPGY MEPTAVITPP TTTTKKPRVS TPRPATPSTD SSTTTTRRPT ENSP00000442600/1-895 IRPTMTIPGY VEPTAVATPP TTTTKKPRVS TPKPATPSTD STTTTTRRPT bmy_06010T0/1-846 IRPTMTIPGY VEPTAVATPP TITTKKPRVS TPKPATPSTD SSTTTTRRPT BACU002397/1-881 IRPTMTIPGY VEPTAVATPP TITTKKPRVS TPKPATPSTD SSTTTTRRPT 451 500 ENSTTRP00000002571/1-892 KKPRTPRPVP RVTTKAPVTR LETASPPTRI RTTTSGMPRG GEPNQRPELK ENSBTAP00000015385/1-895 KKPRTSRPVP RVTTKAPITR LETASPPTRM RTTTSGVPHG GEPNQRPELK ENSP00000442600/1-895 KKPRTPRPVP RVTTKVSITR LETASPPTRI RTTTSGVPRG GEPNQRPELK bmy_06010T0/1-846 KKPRTPRPVP RVTTKAPVTR LETASPPTRI RTTTSGMPRG GEPNQRPELK BACU002397/1-881 KKPRTPRPVP RVTTKAPVTR LETASPPTRI RTTTSGMPRG GEPNQRPELK 501 550 ENSTTRP00000002571/1-892 NHIDRVDAWV GTYFEVKIPS DTFYDNEDTT TDKLKLTLKL REQQLVGEKS ENSBTAP00000015385/1-895 NHIDRVDAWV GTYFEVKIPS DTFYDNEDTT TDKLKLTLKL REQQLVGEKS ENSP00000442600/1-895 NHIDRVDAWV GTYFEVKIPS DTFYDHEDTT TDKLKLTLKL REQQLVGEKS bmy_06010T0/1-846 NHIDRVDAWV GTYFEVKIPS DTFYDNEDTT TDKLKLTLKL REQQLVGEKS BACU002397/1-881 NHIDRVDAWV GTYFEVKIPS DTFYDNEDTT TDKLKLTLKL REQQLVGEKS 551 600 ENSTTRP00000002571/1-892 WVQFNSNSQL MYGLPDSSHV GKHEYFMHAT DKGGLSAVDA FEIHVHRRPQ ENSBTAP00000015385/1-895 WVQFNSNSQL MYGLPDSSHV GKHEYFMHAT DKGGLSAVDA FEIHVHRRPQ ENSP00000442600/1-895 WVQFNSNSQL MYGLPDSSHV GKHEYFMHAT DKGGLSAVDA FEIHVHRRPQ bmy_06010T0/1-846 WVQFNSNSQL MYGLPDSSHV GKHEYFMHAT DKGGLSAVDA FEIHVHRRPQ BACU002397/1-881 WVQFNSNSQL MYGLPDSSHV GKHEYFMHAT DKGGLSAVDA FEIHVHRRPQ 601 650 ENSTTRP00000002571/1-892 GDRAPARFEA KFVGDPAAVV NDIHKMIA-V KKLAFAFG-R NCXXXXXXXX ENSBTAP00000015385/1-895 GDKAPARFKA KLTGDPAAVT NDIHKKIALV KKLAFAFGDR NCSTITLQNI ENSP00000442600/1-895 GDRAPARFKA KFVGDPALVL NDIHKKIALV KKLAFAFGDR NCSTITLQNI bmy_06010T0/1-846 GDRAPARFKA KFVGDPAAVV NDIHKKIALV KKLAFAFGDR NCSTITLQNI BACU002397/1-881 GDRAPARFKA KFVGDPTAVV NDIHKKIALV KKLAFAFGDR NCSTITLQNI 651 700 ENSTTRP00000002571/1-892 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000015385/1-895 TRGSIVVEWT NNTLPLEPCP KEQITALSRR IAEDDGKPRG AFVNALEPDF ENSP00000442600/1-895 TRGSIVVEWT NNTLPLEPCP KEQIAGLSRR IAEDDGKPRP AFSNALEPDF bmy_06010T0/1-846 TRGSIVVEWT NNTLPLEPCP KEQITGLSQR IAEDDGKPRA AFANALEPDF BACU002397/1-881 TRGSIVVEWT NNTLPLEPCP KERITGLSQR IAEDDGKPRA AFANALEPDF 701 750 ENSTTRP00000002571/1-892 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000015385/1-895 QAMSITVTGS GSCRHLQFVP VAPPMRVPSE APATEVPDRD PEKSSEDDVY ENSP00000442600/1-895 KATSITVTGS GSCRHLQFIP VVPPRRVPSE APPTEVPDRD PEKSSEDDVY bmy_06010T0/1-846 KAMSISVTGS GSCRHLQFVP VASPRRVPSE APPTEVPDRD PEKSSEDDVY BACU002397/1-881 KALSISVTGS GSCRHLQFVP VAPPRRVPSE APPTEVPDRD PEKSSEDDVY 751 800 ENSTTRP00000002571/1-892 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXTLEGQAT VIKKGVPII- ENSBTAP00000015385/1-895 LHTVIPAVVV AAILLIAGII AMICYRKKRK GKLTLEDQAT FIKKGVPIIF ENSP00000442600/1-895 LHTVIPAVVV AAILLIAGII AMICYRKKRK GKLTLEDQAT FIKKGVPIIF bmy_06010T0/1-846 LHTVIPAVVV AAILLIAGII AMICYRKKRK GKLTLEDQAT FIKKGVPIIF BACU002397/1-881 LHTVIPAVVV AAILLIAGII AMICYRKKRK GKLTLEDQAT FIKKGVPIIF 801 850 ENSTTRP00000002571/1-892 ADELDDSKPP PSSSMPLILQ EEKAPLPPPE YPNQNVPETT PLNQDTVGEY ENSBTAP00000015385/1-895 ADELDDSKPP PSSSMPLILQ EEKAPLPPPE YPNQSVPETT PLNQDTVGEY ENSP00000442600/1-895 ADELDDSKPP PSSSMPLILQ EEKAPLPPPE YPNQSVPETT PLNQDTMGEY bmy_06010T0/1-846 ADELDDSKPP PSSSMPLILQ EEKAPLPPPE YPNQNVPETT PLNQDTVGEY BACU002397/1-881 ADELDDSKPP PSSSMPLILQ EEKAPLPPPE YPNQNVPETT PLNQDTVGEY 851 900 ENSTTRP00000002571/1-892 TPLRDEDPNA PPYQPPPPFT APMEGKGSRP KNMTPYRSPP PYVPP ENSBTAP00000015385/1-895 APLRDEDPSA PPYQPPPPFT APMEGKGSRP KNMTPYRSPP PYVPP ENSP00000442600/1-895 TPLRDEDPNA PPYQPPPPFT APMEGKGSRP KNMTPYRSPP PYVPP bmy_06010T0/1-846 TPLRDEDPNA PPYQPPPPFT APMEGKGSRP KNMTPYRSPP PYVPP BACU002397/1-881 TPLRDEDPNA PPYQPPPPFT APMEGKGSRP KNMTPYRSPP PYVPP