KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:43 2014 Check: 00 .. Name: ENSP00000296456/1-732 Len: 838 Check: 9215 Weight: 1.00 Name: ENSBTAP00000015388/1-730 Len: 838 Check: 1761 Weight: 1.00 Name: BACU002395/1-838 Len: 838 Check: 2365 Weight: 1.00 Name: ENSTTRP00000002573/1-731 Len: 838 Check: 8647 Weight: 1.00 Name: bmy_06012T0/1-671 Len: 838 Check: 4507 Weight: 1.00 // 1 50 ENSP00000296456/1-732 MER------- ---------- ---------- ---------- ---------- ENSBTAP00000015388/1-730 MER------- ---------- ---------- ---------- ---------- BACU002395/1-838 MERQVRERPA VPVVFAARAG PDPDVSPAQV LLSEPEEAAA LYRGLSRQPA ENSTTRP00000002573/1-731 MER------- ---------- ---------- ---------- ---------- bmy_06012T0/1-671 MER------- ---------- ---------- ---------- ---------- 51 100 ENSP00000296456/1-732 ---------- ---------- ---------- -----QVLLS EPEEAAALYR ENSBTAP00000015388/1-730 ---------- ---------- ---------- -----QVLLS EPEEAAALYR BACU002395/1-838 LSAACLGPEV TTQYGGCYRT VHTARAGPDP DVSPAQVLLS EPEEAAALYR ENSTTRP00000002573/1-731 ---------- ---------- ---------- -----QVLLN EPEEAAALYR bmy_06012T0/1-671 ---------- ---------- ---------- -----QVLLS EPEEAAALYR 101 150 ENSP00000296456/1-732 GLSRQPALSA ACLGPEVTTQ YGGQYRTVHT EWTQRDLERM ENIRFCRQYL ENSBTAP00000015388/1-730 GLSRQPALSA ACLGPEVTTQ YGGRYRTVHT EWTQRDLERM ENIRFCRQYL BACU002395/1-838 GLSRQPALSA ACLGPEVTTQ YGGCYRTVHT EWTQRDLERM ENIRFCRQYL ENSTTRP00000002573/1-731 DLSRQPALSA ACLGPEVTTQ YGGCYRTVHT EWTQRDLERM ENIRFCRQYL bmy_06012T0/1-671 GLSRQPALSA ACLGPEVTTQ YGGCYRTVHT EWTQRDLERM ENIRFCRQYL 151 200 ENSP00000296456/1-732 VFHDGDSVVF AGPAGNSVET RGELLSRESP SGTMKAVLRK AGGTGPGEEK ENSBTAP00000015388/1-730 VFHDGDSVVF AGPAGNSVET RGELLSRESP SGTMKAVLRK AG--STGEEK BACU002395/1-838 VFHDADSVVF AGPAGNSVET RGELLSRESP SGTMKAVLRK AGGPGTGEEK ENSTTRP00000002573/1-731 VFHDADSVVF AGPAGNSVET RGELLSRESP SGTMKAVLRK AGGPGAGEEK bmy_06012T0/1-671 VFHDADSVV- ---------- ---LLSRESP SGTMKAVLRK AGGPGTGEEK 201 250 ENSP00000296456/1-732 QFLEVWEKNR KLKSFNLSAL EKHGPVYEDD CFGCLSWSHS ETHLLYVAEK ENSBTAP00000015388/1-730 QFLEVWEKNR KLKSFNLSAL EKHGPVYEDD CFGCLSWSHS ETHLLYVAEK BACU002395/1-838 QFLEVWEKNR KLKSFNLSAL EKHGLVYEDD CFGCLSWSHS ETHLLYVAEK ENSTTRP00000002573/1-731 QFLEVWEKNR KLKSFNLSAL EKHGLVYEDD CFGCLSWSHS ETHLLYVAEK bmy_06012T0/1-671 QFLEVWEKNR KLKSFNLSAL EKHGLVYEDD CFGCLSWSHS ETHLLYVAEK 251 300 ENSP00000296456/1-732 KRPKAESFFQ TKALDVSASD DEIARLKKPD QAIK------ -------GDQ ENSBTAP00000015388/1-730 KRPKAESFFQ TKALDISGSD DEMARPKKPD QAIK------ -------GDQ BACU002395/1-838 KRPKAESFFQ TKALDVSGSD DEVARLKKPD QAIKVLIGHG QSMKAPQGSA ENSTTRP00000002573/1-731 KRPKAESFFQ TKALDVSGSD DEVARLKKPD QAIK------ -------GDQ bmy_06012T0/1-671 KRPKAESFFQ TKALDVSGSD DEVARLKKPD QAIK------ -------GDQ 301 350 ENSP00000296456/1-732 FVFYE----- ------DWGE NMVSKSIPVL CVLDVESGNI SVLEGVPENV ENSBTAP00000015388/1-730 FLFYE----- ------DWGE NMVSKGSPVL CVLDIESGNI SVLEGVPESV BACU002395/1-838 GVHYALCPHC AYQNQGDWGE NLVSKSTPVL CVLDVESGNI SVLEGVPESV ENSTTRP00000002573/1-731 FLFYE----- ------DWGE NLVSKSTPVL CVLDVESGNI SVLEGVPESV bmy_06012T0/1-671 FLFYE----- ------DWGE NLVSKSTPVL CVLDVESGNI SVLEGVPESV 351 400 ENSP00000296456/1-732 SPGQAFWAPG DAGVVFVGWW HEPFRLGIRF CTNRRSALYY VDLIGGKCEL ENSBTAP00000015388/1-730 SPGQAFWAPG DTGVVFAGWW HEPFRLGIRF CTNRRSALYY VDLTGGNCEL BACU002395/1-838 SPGQAFWAPG DTGVVFVGWW HEPFRLGIRF CTNRRSALYY VDLIGGKCEL ENSTTRP00000002573/1-731 SPGQAFWAPG DTGVVFVGWW HEPFRLGIRF CTNRRSALYY VDLIGGKCEL bmy_06012T0/1-671 SPGQAFWAPG DTGVVFVGWW HEPFRLGIRF CTNRRSALYY VDLIGGKCEL 401 450 ENSP00000296456/1-732 LSDDSLAVSS PRLSPDQCRI VYLQYPSLIP HHQCSQLCLY DWYTKVTSVV ENSBTAP00000015388/1-730 LSDDSLAVTS PRLSPDQCRI VYLQFPSLVP HQQCGQLCLY DWYTRVTVVV BACU002395/1-838 LSDDSLAVSS PRLSPDQCRV VYLRFPSLLP HQQCGQLCLY DWYTRVTSVV ENSTTRP00000002573/1-731 LSDDSLAVSS PRLSPDQCRI VYLRFPSLVP HQQCGQLCLY DWYTRVTSVV bmy_06012T0/1-671 LSDDSLAVSS PRLSPDQCRI VYLRFPSLVP HQQCGQLCLY DWYTRVTSVV 451 500 ENSP00000296456/1-732 VDVVPRQLGE NFSGIYCSLL PLGCWSADSQ RVVFDSAQRS RQDLFAVDTQ ENSBTAP00000015388/1-730 VDVVPRQLGE NFSGIYCSLL PLGCWSADSQ RVVFDTAQRS RQDLFAVDTQ BACU002395/1-838 VDVVPRQLGE NFSGIYCSLL PLGCWSADSQ RVVFDSAQRS RQDLFAVDTQ ENSTTRP00000002573/1-731 VDVVPRQLGE NFSGIYCSLL PPGCWSADSQ RVVFDSAQRS RQDLFAVDTQ bmy_06012T0/1-671 VDVVPRQLGE NFSGIYCSLL PLGCWSADSQ RVVFDSAQRS RQ-------- 501 550 ENSP00000296456/1-732 VGTVTSLTAG GSGGSWKLLT IDQDLMVAQF STPSLPPTLK VGFLPSAGKE ENSBTAP00000015388/1-730 MGTVTPLTAG GSGGSWKLLT IDRDLMVAQF STPNLPPCLK VGFLPPAGME BACU002395/1-838 MGGVTSLTAG GSGGSWKLLT IDRDLMVAQF STPSLPPCLK LGFLPPEGRE ENSTTRP00000002573/1-731 MGSVTSLTAG GSGGSXXXXX XXXXXXXXXX XXXXXXXXXK VGFLPPEGKE bmy_06012T0/1-671 ---------- ---------- ---------- ---------K VGFLPPEGKE 551 600 ENSP00000296456/1-732 QSVLWVSLEE AEPIPDIHWG IRVLQPPPEQ ENVQYAGLDF EAILLQPGSP ENSBTAP00000015388/1-730 QEVVWVSLEE AEPIPDISWS IRVLQPPPEQ EHAQYVGLDF EAILIQPSNP BACU002395/1-838 QAVSWVSLEE AEPIPEISWS IRVLQPPPEQ EHVQYAGLDF EAILLQPSDP ENSTTRP00000002573/1-731 QAVSWVSLEE AEPIPEISWS IRVLQPPPEQ EHVQYAGLDF EAILLQPSDP bmy_06012T0/1-671 QAVSWVSLEE AEPIPGISWS IRVLQPPPEQ EHVQYAGLDF EAILLQPSDP 601 650 ENSP00000296456/1-732 PDKTQVPMVV MPHGGPHSSF VTAWMLFPAM LCKMGFAVLL VNYRGSTGFG ENSBTAP00000015388/1-730 PDKTQVPMVV MPHGGPHSSF VTSWMLLPAM LCKMGFAALL VNYRGSTGFG BACU002395/1-838 PDKTQVPMVV MPHGGPHSSF VTAWMLLPAM LCKMGFAVLL VNYRGSTGFG ENSTTRP00000002573/1-731 PDKTQVPMVV MPHGGPHSSF VTAWMLLPAM LCKMGFAVLL VNYRGSTGFG bmy_06012T0/1-671 PDKTQVPMVV MPHGGPHSSF VTAWMLLPAM LCKMGFAVLL VNYRGSTGFG 651 700 ENSP00000296456/1-732 QDSILSLPGN VGHQDVKDVQ FAVEQVLQEE HFDASHVALM GGSHGGFISC ENSBTAP00000015388/1-730 QDSILSLPGN VGSQDVKDVQ FAVEQVLQEE HFDAGRVALL GGSHGGFLSC BACU002395/1-838 QDSILSLPGN VGHQDVKDVQ FAVEQVLQEE HFDAGRVALM GGSHGGFLSC ENSTTRP00000002573/1-731 -DSILSLPGN VGHQDVKDVQ FAVEQVLQEE HFDAGRVALM GGSHGGFLSC bmy_06012T0/1-671 QDSILSLPGN VGHQDVKDVQ FAVEQVLQEE HFDAGRVALM GGSHGGFLSC 701 750 ENSP00000296456/1-732 HLIGQYPETY RACVARNPVI NIASMLGSTD IPDWCVVEAG FPFSSDCLPD ENSBTAP00000015388/1-730 HLIGQYPETY GACVVRNPVI NIASMMGSTD IPDWCVVEAG YLYSSDCLPD BACU002395/1-838 HLIGQYPETY GACVVRNPVI NIASMMGSTD IPDWCVVEAG FPYSSNCLPD ENSTTRP00000002573/1-731 HLIGQYPETY GACVVRNPVI NIASMMGSTD IPDWCVVEAG FPYSSNCLPD bmy_06012T0/1-671 HLIGQYPETY GACVVRNPVI NIASMMGSTD IPDWCVVEAG FPYSSNCLPD 751 800 ENSP00000296456/1-732 LSVWAEMLDK SPIRYIPQVK TPLLLMLGQE DRRVPFKQGM EYYRALKTRN ENSBTAP00000015388/1-730 PNVWSEMLNK SPIKYTPQVK TPVLLMLGQE DRRVPFKQGM EYYRALKARN BACU002395/1-838 LNMWAEMLDK SPIKYTPQVK TPVLLMLGQE DRRVPFKQGM EYYRALKARN ENSTTRP00000002573/1-731 LNMWGEMLHK SPIKYTPQVK TPVLLMLGQE DRRVPFKQGM EYYRALKARN bmy_06012T0/1-671 LNMWAEMLDK SPIKYTPQVK TPVLLMLGQE DRRVPFKQGM EYYRALKARN 801 850 ENSP00000296456/1-732 VPVRLLLYPK STHALSEVEV ESDSFMNAVL WLRTHLGS ENSBTAP00000015388/1-730 VPVRLLLYPK STHSLSEVEV ESDSFMNAVI WMCTHLGH BACU002395/1-838 VPVRLLLYPK STHALSEVEV ESDSFMNAAL WLCTHLGN ENSTTRP00000002573/1-731 VPVRLLLYPK STHALSEVEV ESDSFMNAAL WLCTHLGN bmy_06012T0/1-671 VPVRLLLYPK STHALSEVEV ESDSFMNAAL WLCTHLGN