KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:55:44 2014 Check: 00 .. Name: ENSP00000364389/1-498 Len: 534 Check: 5176 Weight: 1.00 Name: bmy_19207T0/1-379 Len: 534 Check: 860 Weight: 1.00 Name: ENSTTRP00000005495/1-498 Len: 534 Check: 5016 Weight: 1.00 Name: ENSBTAP00000015397/1-498 Len: 534 Check: 5575 Weight: 1.00 // 1 50 ENSP00000364389/1-498 MKRKSERRSS WAAAPPCSRR CSSTSPGVKK IRSSTQQDPR RRDPQDDVYL bmy_19207T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005495/1-498 MKRKSERRPN WAAAPPCSRR CSSSSPGVKK SRSSTSQELH HLDRQDDLYL ENSBTAP00000015397/1-498 MKRKSERRPN WAAAPPCSRR CSLSSPGVKK SRSSTSQELH HLDQQDDLYL 51 100 ENSP00000364389/1-498 DITDRLCFAI LYSRPKSASN VHYFSIDNEL EYENFYADFG PLNLAMVYRY bmy_19207T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005495/1-498 DITDRLCFAI LYSRPKSSSN VHYFSIDNEL EYENFYADFG PLNLAMVYRY ENSBTAP00000015397/1-498 DITHRLCFAI LFSRPKSSSN VHYFSIDNEL EYENFYADFG PLNLAMVYRY 101 150 ENSP00000364389/1-498 CCKINKKLKS ITMLRKKIVH FTGSDQRKQA NAAFLVGCYM VIYLGRTPEE bmy_19207T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005495/1-498 CCKINKKLKS ITMMRKKIIH FTGPDQRKQA NAAFLVGCYM VIYLGKTPEE ENSBTAP00000015397/1-498 CCKINKKLKS ITMMRKKIIH FTGPDQRKQA NAAFLVGCYM VIYLGKTPED 151 200 ENSP00000364389/1-498 AYRILIFGET SYIPFRDAAY GSCNFYITLL DCFHAVKKAM QYGFLNFNSF bmy_19207T0/1-379 -----MFGDT SYIPFRDAAY GSCNFYITLL DCFYAVKKAM QYGFLNFNSF ENSTTRP00000005495/1-498 AYRILMFGDT SYIPFRDAAY GSCNFYITLL DCFYAVKKAM QYGFLNFNSF ENSBTAP00000015397/1-498 AYRILMFGDA TYIPFRDAAY GSCNFFITLL DCFYAVKKAM QYGFFNFNSF 201 250 ENSP00000364389/1-498 NLDEYEHYEK AENGDLNWII PDRFIAFCGP HSRARLESGY HQHSPETYIQ bmy_19207T0/1-379 NLDEYEYYEK AENGDLNWII PDRFLAFCGP HSRTRLESGY HQHSPEAYIP ENSTTRP00000005495/1-498 NLDEYEYYEK AENGDLNWII PDRFLAFCGP HSRTRLESGY HQHSPEAYIP ENSBTAP00000015397/1-498 NLDEYEYYEK AENGDLNWII PDRFLAFCGP HSRTRLESGY HQHSPEAYIP 251 300 ENSP00000364389/1-498 YFKNHNVTTI IRLNKRMYDA KRFTDAGFDH HDLFFADGST PTDAIVKEFL bmy_19207T0/1-379 YFKNHNVTTI IRLNKRMYDA KRFTNAGFDH YDLFFADGST PTDAIVKEFL ENSTTRP00000005495/1-498 YFKNHNVTTI IRLNKRMYDA KRFTNAGFDH YDLFFADGST PTDAIVKEFL ENSBTAP00000015397/1-498 YFKNHNVTTV IRLNKRMYDA KRFTNAGFDH YDLFFADGST PTDAIVKEFL 301 350 ENSP00000364389/1-498 DICENAEGAI AVHCKAGLGR TGTLIACYIM KHYRMTAAET IAWVRICRPG bmy_19207T0/1-379 DICENAEGAI AVHCKAGLGR TGTLIACYIM KHYRMTATEA IAWVRICRPG ENSTTRP00000005495/1-498 DVCENAEGAI AVHCKAGLGR TGTLIACYIM KHYRMTATEA IAWVRICRPG ENSBTAP00000015397/1-498 DICENAEGAI AVHCKAGLGR TGTLIACYIM KHYRMTATET IAWVRICRPG 351 400 ENSP00000364389/1-498 SVIGPQQQFL VMKQTNLWLE GDYFRQKLKG QENGQHRAAF SKLLSGVDDI bmy_19207T0/1-379 SVIGPQQQFL MMKQASLWME GDYFRQKLKG QENGKHRAAV SKLLLAVDDI ENSTTRP00000005495/1-498 SVIGPQQQFL MMKQASLWLE GDYFRQKLKG QENGRHRAAV SKLLLAVDDI ENSBTAP00000015397/1-498 SVIGPQQQFL MMKQASLWIE GDYFRQKLRG QENGKHRAAV SKLLLAVDDI 401 450 ENSP00000364389/1-498 SINGVENQDQ QEPEPYSDDD EINGVTQGDR LRALKSRRQS KTNAIPLTVI bmy_19207T0/1-379 SINGVENQDK QERELYSDDD EINVVTQGDR LRALKSRRQS KTNAIPLTVI ENSTTRP00000005495/1-498 SINGVENEDK QEHELYSDDD EINAVTQGDR LRALKSRRQS KTNAIPLTVI ENSBTAP00000015397/1-498 SINGVENQDK QEPELYSDDD EISGVTQGDR LRALKSRRQS KTNALPLTVI 451 500 ENSP00000364389/1-498 LQSSVQSCKT SEPNISGSAG ITKRTTRSAS RKSSVK---- ---------- bmy_19207T0/1-379 LQSSVQSCKT SEPNISGSAG ITKRTTRSAS RKSSFKRLML FVRHHHHPYC ENSTTRP00000005495/1-498 LQSSVQSCKT SEPNISGSAG ITKRTTRSAS RKSSFK---- ---------- ENSBTAP00000015397/1-498 LQSSVQSCKT SEPNISGSAG ITKRTTRSAS RKSSFK---- ---------- 501 550 ENSP00000364389/1-498 --SLSISRTK TVLR------ ---------- ---- bmy_19207T0/1-379 AIELDLSFPC SILLFEAFQD EDLTKIHFPL ICLF ENSTTRP00000005495/1-498 --SPSISRTK TVLR------ ---------- ---- ENSBTAP00000015397/1-498 --SPSISRTK TVLR------ ---------- ----