KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:45 2014 Check: 00 .. Name: BACU010770/1-226 Len: 276 Check: 6935 Weight: 1.00 Name: bmy_21368T0/1-237 Len: 276 Check: 9784 Weight: 1.00 Name: ENSP00000452123/1-272 Len: 276 Check: 8804 Weight: 1.00 Name: ENSBTAP00000015408/1-272 Len: 276 Check: 9200 Weight: 1.00 Name: ENSTTRP00000003113/1-273 Len: 276 Check: 6578 Weight: 1.00 // 1 50 BACU010770/1-226 MSGCRVFIGR LNPAAREKDV ERFFKGYGRI RDIDLKRGFG FVEFEDPRDA bmy_21368T0/1-237 MSGCRVFIGR LNPAAREKDV ERFFKGYGRI RDIDLKRGFG FVEFEDPRDA ENSP00000452123/1-272 MSGCRVFIGR LNPAAREKDV ERFFKGYGRI RDIDLKRGFG FVEFEDPRDA ENSBTAP00000015408/1-272 MSGCRVFIGR LNPAAREKDV ERFFKGYGRI RDIDLKRGFG FVEFEDPRDA ENSTTRP00000003113/1-273 -SGCRVFIGR LNPAAREKDV ERFFKGYGRI RDIDLKRGFG FVEFEDPRDA 51 100 BACU010770/1-226 DDAVYELDGK ELCSERVTIE HARARSRGGR GRGRYSDRFS SRRPRNDRR- bmy_21368T0/1-237 DDAVYELDGK ELCSERVTIE HARARSRGGR GRGRYSDRFS SRRPRNDRRN ENSP00000452123/1-272 DDAVYELDGK ELCSERVTIE HARARSRGGR GRGRYSDRFS SRRPRNDRRN ENSBTAP00000015408/1-272 DDAVYELDGK ELCSERVTIE HARARSRGGR GRGRYSDRFS SRRPRNDRRN ENSTTRP00000003113/1-273 DDAVYELDGK ELCSERVTIE HARARSRGGR GRGRYSDRFS SRRPRNDRRN 101 150 BACU010770/1-226 ---------- VVEFAS---- YGDLK----- ---------- ---------- bmy_21368T0/1-237 APPVRTENRL IVENLSSRVS WQDLKDFMRQ AGEVTFADAH RPKLNE---- ENSP00000452123/1-272 APPVRTENRL IVENLSSRVS WQDLKDFMRQ AGEVTFADAH RPKLNEGVVE ENSBTAP00000015408/1-272 APPVRTENRL IVENLSSRVS WQDLKDFMRQ AGEVTFADAH RPKLNEGVVE ENSTTRP00000003113/1-273 APPVRTENRL IVENLSSRVS WQDLKDFMRQ AGEVTFADAH RPKLNEGVVE 151 200 BACU010770/1-226 --------NA IEKLSGKEIN GRKIKLIEGS KRHSRSRSRS RSRSRSSSRS bmy_21368T0/1-237 ---------- ---------- --------G- ----RSRSRS RSRSRSSSRS ENSP00000452123/1-272 FASYGDLKNA IEKLSGKEIN GRKIKLIEGS KRHSRSRSRS RSRTRSSSRS ENSBTAP00000015408/1-272 FASYGDLKNA IEKLSGKEIN GRKIKLIEGS KRHSRSRSRS RSRTRSSSRS ENSTTRP00000003113/1-273 FASYGDLKNA IEKLSGKEIN GRKIKLIEGS KRHSRSRSRS RSRTRSSSRS 201 250 BACU010770/1-226 RSRSRSRSRK SYSRSRSRSR SRSRSKSRSV SRSPVPEKSQ KRGSSSRSKS bmy_21368T0/1-237 RSRSRSRSRK SYSRSRSRSR SRSRSKSRSV SRSPVPEKSQ KRGSSSRSKS ENSP00000452123/1-272 RSRSRSRSRK SYSRSRSRSR SRSRSKSRSV SRSPVPEKSQ KRGSSSRSKS ENSBTAP00000015408/1-272 RSRSRSRSRK SY--SRSRSR SRSRSKSRSV SRSPVPEKSQ KRGSSSRSKS ENSTTRP00000003113/1-273 RSRSRSRSRK SY--SRSRSR SRSRSKSRSV SRSPVPEKSQ KRGSSSRSKS 251 300 BACU010770/1-226 PASVDRQ--R SRSRSRSRSR SVDSGN bmy_21368T0/1-237 PASVDRQ--R SRSRSRSRSR SVDSGN ENSP00000452123/1-272 PASVDRQ--- -RSRSRSRSR SVDSGN ENSBTAP00000015408/1-272 PASVDRQ--R SRSRSRSRSR SVDSGN ENSTTRP00000003113/1-273 PASVDRQRSR SRSRSRSRSR SVDSGN