KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:46 2014 Check: 00 .. Name: ENSTTRP00000010015/1-1448 Len: 1555 Check: 6168 Weight: 1.00 Name: bmy_15197T0/1-813 Len: 1555 Check: 7022 Weight: 1.00 Name: ENSP00000313851/1-1447 Len: 1555 Check: 8751 Weight: 1.00 Name: BACU015751/1-1448 Len: 1555 Check: 2767 Weight: 1.00 Name: ENSBTAP00000015410/1-1449 Len: 1555 Check: 1842 Weight: 1.00 // 1 50 ENSTTRP00000010015/1-1448 MAHSKTRTND GKITYPPGVK EISDKISKEE MVRRLKMVVK TFMDMDQDSE bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 MAHSKTRTND GKITYPPGVK EISDKISKEE MVRRLKMVVK TFMDMDQDSE BACU015751/1-1448 MAHSKTRTND GKITYPPGVK EISDKISKEE MVRRLKMVVK TFMDMDQDSE ENSBTAP00000015410/1-1449 MAHSKTRTND GKITYPPGVK EISDKISKEE MVRRLKMVVK TFMDMDQDSE 51 100 ENSTTRP00000010015/1-1448 EEKELYLNLA LHLASDFFLK HPDKDVRLLV ACCLADIFRI YAPEAPYTSP bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 EEKELYLNLA LHLASDFFLK HPDKDVRLLV ACCLADIFRI YAPEAPYTSP BACU015751/1-1448 EEKELYLNLA LHLASDFFLK HPDKDVRLLV ACCLADIFRI YAPEAPYTSP ENSBTAP00000015410/1-1449 EEKELYLNLA LHLASDFFLK HPDKDVRLLV ACCLADIFRI YAPEAPYTSP 101 150 ENSTTRP00000010015/1-1448 DKLKDIFMFI TRQLKGLEDT KSPQFNRYFY LLENIAWVKS YNICFELEDS bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 DKLKDIFMFI TRQLKGLEDT KSPQFNRYFY LLENIAWVKS YNICFELEDS BACU015751/1-1448 DKLKDIFMFI TRQLKGLEDT KSPQFNRYFY LLENIAWVKS YNICFELEDS ENSBTAP00000015410/1-1449 DKLKDIFMFI TRQLKGLEDT KSPQFNRYFY LLENIAWVKS YNICFELEDS 151 200 ENSTTRP00000010015/1-1448 NEIFTQLYRT LFSVINNGHN QKVHMHMVDL MSSIICEGDT VSQELLDTVL bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 NEIFTQLYRT LFSVINNGHN QKVHMHMVDL MSSIICEGDT VSQELLDTVL BACU015751/1-1448 NEIFTQLYRT LFSVINNGHN QKVHMHMVDL MSSIICEGDT VSQELLDTVL ENSBTAP00000015410/1-1449 NEIFTQLYRT LFSVINNGHN QKVHMHMVDL MSSIICEGDT VSQELLDTVL 201 250 ENSTTRP00000010015/1-1448 VNLVPAHKNL NKQAYDLAKA LLKRTAQAIE PYITNFFNQV LMLGKTSISD bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 VNLVPAHKNL NKQAYDLAKA LLKRTAQAIE PYITNFFNQV LMLGKTSISD BACU015751/1-1448 VNLVPAHKNL NKQAYDLAKA LLKRTAQAIE PYITNFFNQV LMLGKTSISD ENSBTAP00000015410/1-1449 VNLVPAHKNL NKQAYDLAKA LLKRTAQAIE PYITNFFNQV LMLGKTSISD 251 300 ENSTTRP00000010015/1-1448 LSEHVFDLIL ELYNIDSHLL LSVLPQLEFK LKSNDNEERL QVVKLLAKMF bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 LSEHVFDLIL ELYNIDSHLL LSVLPQLEFK LKSNDNEERL QVVKLLAKMF BACU015751/1-1448 LSEHVFDLIL ELYNIDSHLL LSVLPQLEFK LKSNDNEERL QVVKLLAKMF ENSBTAP00000015410/1-1449 LSEHVFDLIL ELYNIDSHLL LSVLPQLEFK LKSNDNEERL QVVKLLAKMF 301 350 ENSTTRP00000010015/1-1448 GAKDSELASQ NKPLWQCYLG RFNDIHVPIR LECVKFASHC LMNHPDLAKD bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 GAKDSELASQ NKPLWQCYLG RFNDIHVPIR LECVKFASHC LMNHPDLAKD BACU015751/1-1448 GAKDSELASQ NKPLWQCYLG RFNDIHVPIR LECVKFASHC LMNHPDLAKD ENSBTAP00000015410/1-1449 GAKDSELASQ NKPLWQCYLG RFNDIHVPIR LECVKFASHC LMNHPDLAKD 351 400 ENSTTRP00000010015/1-1448 LTEYLKVRSH DPEEAIRHDV IVSIVTAAKK DILLVNDHLL NFVRERTLDK bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 LTEYLKVRSH DPEEAIRHDV IVSIVTAAKK DILLVNDHLL NFVRERTLDK BACU015751/1-1448 LTEYLKVRSH DPEEAIRHDV IVSIVTAAKK DILLVNDHLL NFVRERTLDK ENSBTAP00000015410/1-1449 LTEYLKVRSH DPEEAIRHDV IVSIVTAAKK DILLVNDHLL NFVRERTLDK 401 450 ENSTTRP00000010015/1-1448 RWRVRKEAMM GLAQIYKKYA LQSAAGKDAA KQISWIKDKL LHIYYQNSID bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 RWRVRKEAMM GLAQIYKKYA LQSAAGKDAA KQIAWIKDKL LHIYYQNSID BACU015751/1-1448 RWRVRKEAMM GLAQIYKKYA LQSAAGKDAA KQISWIKDKL LHIYYQNSID ENSBTAP00000015410/1-1449 RWRVRKEAMM GLAQIYKKYA LQSAAGKDAA KQISWIKDKL LHIYYQNSID 451 500 ENSTTRP00000010015/1-1448 DRLLVERIFA QYXXXXXXXX XXXXXXXXXX XXXXXXXXXX ALNEMWKCQN bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 DRLLVERIFA QYMVPHNLET TERMKCLYYL YATLDLNAVK ALNEMWKCQN BACU015751/1-1448 DRLLVERIFA QYMVPHNLET TERMKCLYYL YATLDLNAVK ALNEMWKCQN ENSBTAP00000015410/1-1449 DRLLVERIFA QYMVPHNLET TERMKCLYYL YATLDLNAVK ALNEMWKCQN 501 550 ENSTTRP00000010015/1-1448 LLRHQVKDLL DLIKQPKTDA SVKAIFSKVM VITRNLPDPG KAQDFMKKFT bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 LLRHQVKDLL DLIKQPKTDA SVKAIFSKVM VITRNLPDPG KAQDFMKKFT BACU015751/1-1448 LLRHQVKDLL DLIKQPKTDA SVKAIFSKVM VITRNLPDPG KAQDFMKKFT ENSBTAP00000015410/1-1449 LLRHQVKDLL DLIKQPKTDA SVKAIFSKVM VITRNLPDPG KAQDFMKKFT 551 600 ENSTTRP00000010015/1-1448 QVLEDDEKIR KQLEVLVSPT CSCKQAEGCV XXXXXXXXXX XXXXXXXXXX bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 QVLEDDEKIR KQLEVLVSPT CSCKQAEGCV REITKKLGNP KQPTNPFLEM BACU015751/1-1448 QVLEDDEKIR KQLEVLVSPT CSCKQAEGCV REITKKLGNP KQPTNPFLEM ENSBTAP00000015410/1-1449 QVLEDDEKIR KQLEVLVSPT CSCKQAEGCV REITKKLGNP KQPTNPFLEM 601 650 ENSTTRP00000010015/1-1448 XXXXXXXXXX XXXXXXXXXA LIKQVNKSID GTADDEDEGV PTDQAIRAGL bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 IKFLLERIAP VHIDTESISA LIKQVNKSID GTADDEDEGV PTDQAIRAGL BACU015751/1-1448 IKFLLERIAP VHIDTESISA LIKQVNKSID GTADDEDEGV PTDQAIRAGL ENSBTAP00000015410/1-1449 IKFLLERIAP VHIDTESISA LIKQVNKSID GTADDEDEGV PTDQAIRAGL 651 700 ENSTTRP00000010015/1-1448 ELLKVLSFTH PISFHSAETF ESLLACLKMD DEKVAEAALQ IFKNTGSKIE bmy_15197T0/1-813 ---------- ---------- ---------- ---------- ---------- ENSP00000313851/1-1447 ELLKVLSFTH PISFHSAETF ESLLACLKMD DEKVAEAALQ IFKNTGSKIE BACU015751/1-1448 ELLKVLSFTH PISFHSAETF ESLLACLKMD DEKVAEAALQ IFKNTGSKIE ENSBTAP00000015410/1-1449 ELLKVLSFTH PISFHSAETF ESLLACLKMD DEKVAEAALQ IFKNTGGKIE 701 750 ENSTTRP00000010015/1-1448 EDFPHIRSAL LPVLHHKSKK GPPRQAKYAI HCIHAIFSSK ETQFAQIFEP bmy_15197T0/1-813 -----MSEAL LPVLHHKSKK GPPRQAKYAI HCIHAIFSSK ETQFAQIFEP ENSP00000313851/1-1447 EDFPHIRSAL LPVLHHKSKK GPPRQAKYAI HCIHAIFSSK ETQFAQIFEP BACU015751/1-1448 EDFPHIRSAL LPVLHHKSKK GPPRQAKYAI HCIHAIFSSK ETQFAQIFEP ENSBTAP00000015410/1-1449 EDFPHIRSAL LPVLHHKSKK GPPRQAKYAI HCIHAIFSSK ETQFAQIFEP 751 800 ENSTTRP00000010015/1-1448 LHKSLDPSNL EHLITPLVTI GHIALLAPDQ FAAPLKSLVA TFIVKDLLMN bmy_15197T0/1-813 LHKSLDPSNL EHLITPLVTI GHIALLAPDQ FAAPLKSLVA TFIVKDLLMN ENSP00000313851/1-1447 LHKSLDPSNL EHLITPLVTI GHIALLAPDQ FAAPLKSLVA TFIVKDLLMN BACU015751/1-1448 LHKSLDPSNL EHLITPLVTI GHIALLAPDQ FAAPLKSLVA TFIVKDLLMN ENSBTAP00000015410/1-1449 LHKSLDPSNL EHLITPLVTI GHIALLAPDQ FAAPLKSLVA TFIVKDLLMN 801 850 ENSTTRP00000010015/1-1448 DRXXXXXXXX XXXXXXXXXX XXXXXIQAIK MMVRWLLGMK NNHSKSGTST bmy_15197T0/1-813 DRLPGKKTTK LWVPDEEVSP ETMVKIQAIK MMVRWLLGMK NNHSKSGTST ENSP00000313851/1-1447 DRLPGKKTTK LWVPDEEVSP ETMVKIQAIK MMVRWLLGMK NNHSKSGTST BACU015751/1-1448 DRLPGKKTTK LWVPDEEVSP ETMVKIQAIK MMVRWLLGMK NNHSKSGTST ENSBTAP00000015410/1-1449 DRLPGKKTTK LWVPDEEVSP ETMVKIQAIK MMVRWLLGMK NNHSKSGTST 851 900 ENSTTRP00000010015/1-1448 LRLLTTILHS DGDLTEQGKI SKPDMSRLRL AAGSAIVKLA QEPCYHEIIT bmy_15197T0/1-813 LRLLTTILHS DGDLTEQGKI SKPDMSRLRL AAGSAIVKLA QEPCYHEIIT ENSP00000313851/1-1447 LRLLTTILHS DGDLTEQGKI SKPDMSRLRL AAGSAIVKLA QEPCYHEIIT BACU015751/1-1448 LRLLTTILHS DGDLTEQGKI SKPDMSRLRL AAGSAIVKLA QEPCYHEIIT ENSBTAP00000015410/1-1449 LRLLTTILHS DGDLTEQGKI SKPDMSRLRL AAGSAIVKLA QEPCYHEIIT 901 950 ENSTTRP00000010015/1-1448 LEQYQLCALA INDECYQVRQ VFAQKLHKGL SRLRLPLEYM AICALCAKDP bmy_15197T0/1-813 LEQYQLCALA INDECYQVRQ VFAQKLHKGL SRLRLPLEYM AICALCAKDP ENSP00000313851/1-1447 LEQYQLCALA INDECYQVRQ VFAQKLHKGL SRLRLPLEYM AICALCAKDP BACU015751/1-1448 LEQYQLCALA INDECYQVRQ VFAQKLHKGL SRLRLPLEYM AICALCAKDP ENSBTAP00000015410/1-1449 LEQYQLCALA INDECYQVRQ VFAQKLHKGL SRLRLPLEYM AICALCAKDP 951 1000 ENSTTRP00000010015/1-1448 VKERRAHARQ CLVKNINVRR EYLKQHAAVS EKLLSLLPEY VVPYTIHLLA bmy_15197T0/1-813 VKERRAHARQ CLVKNINVRR EYLKQHAAVS EKLLSLLPEY VVPYTIHLLA ENSP00000313851/1-1447 VKERRAHARQ CLVKNINVRR EYLKQHAAVS EKLLSLLPEY VVPYTIHLLA BACU015751/1-1448 VKERRAHARQ CLVKNINVRR EYLKQHAAVS EKLLSLLPEY VVPYTIHLLA ENSBTAP00000015410/1-1449 VKERRAHARQ CLVKNINVRR EYLKQHAAVS EKLLSLLPEY VVPYTIHLLA 1001 1050 ENSTTRP00000010015/1-1448 HDPDYVKVQD IEQLKDVKEC LWFVLEILMA KNENNSHAFI RKMVENIKQT bmy_15197T0/1-813 HDPDYVKVQD IEQLKDVKEC LWFVLEILMA KNENNSHAFI RKMVENIKQT ENSP00000313851/1-1447 HDPDYVKVQD IEQLKDVKEC LWFVLEILMA KNENNSHAFI RKMVENIKQT BACU015751/1-1448 HDPDYVKVQD IEQLKDVKEC LWFVLEILMA KNENNSHAFI RKMVENIKQT ENSBTAP00000015410/1-1449 HDPDYVKVQD IEQLKDVKEC LWFVLEILMA KNENNSHAFI RKMVENIKQT 1051 1100 ENSTTRP00000010015/1-1448 KDAQGPDDAK MNEKLYTVCD VAMNIIMSKS TTYSLESPKD PVLPARFFTQ bmy_15197T0/1-813 KDAQGPDDAK MNEKLYTVCD VAMNIIMSKS TTYSLESPKD PVLPARFFTQ ENSP00000313851/1-1447 KDAQGPDDAK MNEKLYTVCD VAMNIIMSKS TTYSLESPKD PVLPARFFTQ BACU015751/1-1448 KDAQGPDDAK MNEKLYTVCD VAMNIIMSKS TTYSLESPKD PVLPARFFTQ ENSBTAP00000015410/1-1449 KDAQGPDDAK MNEKLYTVCD VAMNIIMSKS TTYSLESPKD PVLPARFFTQ 1101 1150 ENSTTRP00000010015/1-1448 PDKNFSNTKN YLPPEMKSFF TPGKPKTTNV LGAVNKPLSS AGKQSQTKSS bmy_15197T0/1-813 PDKNFSNTKN YLPPEMKSFF TPGKPKTTNV LGAVNKPLSS AGKQSQTKSS ENSP00000313851/1-1447 PDKNFSNTKN YLPPEMKSFF TPGKPKTTNV LGAVNKPLSS AGKQSQTKSS BACU015751/1-1448 PDKNFSNTKN YLPPEMKSFF TPGKPKTTNV LGAVNKPLSS AGKQSQTKSS ENSBTAP00000015410/1-1449 PDKNFSNTKN YLPPEMKSFF TPGKPKTTNV LGAVNKPLSS AGKQSQTKSS 1151 1200 ENSTTRP00000010015/1-1448 RMETVSNASS SSNPSSPGRI KGRLDSSEMD HSENEDYTMS SPLPGKKSDK bmy_15197T0/1-813 RMETVSNASS SSNPSSPGRI KGRLDSSEMD HSENEDYTMS SPLPGKKSDK ENSP00000313851/1-1447 RMETVSNASS SSNPSSPGRI KGRLDSSEMD HSENEDYTMS SPLPGKKSDK BACU015751/1-1448 RMETVSNASS SSNPSSPGRI KGRLDSSEMD HSENEDYTMS SPLPGKKSDK ENSBTAP00000015410/1-1449 RMETVSNASS SSNPSSPGRI KGRLDSSEMD HSENEDYTMS SPLPGKKSDK 1201 1250 ENSTTRP00000010015/1-1448 RDDSDLVRSE LDKPRSRKKT PVTDSEEKLG MDDLTKLVQE QKPKGSQRGR bmy_15197T0/1-813 RDDSDLVRSE LDKPRSRKKT PVTDSEEKLG MDDLTKLVQE QKPKGSQRGR ENSP00000313851/1-1447 RDDSDLVRSE LEKPRGRKKT PVTEQEEKLG MDDLTKLVQE QKPKGSQRSR BACU015751/1-1448 RDDSDLVRSE LDKPRSRKKT PVTDSEEKLG MDDLTKLVQE QKPKGSQRGR ENSBTAP00000015410/1-1449 RDDSDLVRSE LDKPRSRKKT PVTDSEEKLG MDDLSKLVQE QKPKGSQRGR 1251 1300 ENSTTRP00000010015/1-1448 KRGHTASESD EQQWPEEKRL KEDILENEDE QNSPPKKGKR GRPPKPPGGG bmy_15197T0/1-813 KRGHTASESD EQQWPEEKRL KEDILENEDE QNSPPKKGKR GRPPKPLGGG ENSP00000313851/1-1447 KRGHTASESD EQQWPEEKRL KEDILENEDE QNSPPKKGKR GRPPKPLGGG BACU015751/1-1448 KRGHTASESD EQQWPEEKRL KEDILENEDE QNSPPKKGKR GRPPKPLGGG ENSBTAP00000015410/1-1449 KRGHTASESD EQQWPEEKRL KEDILENEDE QNSPPKKGKR GRPPKPLGGG 1301 1350 ENSTTRP00000010015/1-1448 TPKEEPTMKT SKKGSKKKPG PSTAEEEEEE ERQSGNTEQK SKSKQHRTSR bmy_15197T0/1-813 TPKEEPTMKT SKKGSKKKPG PSTAEEEEEE ERQSGNTEQK SKSKQHRTSR ENSP00000313851/1-1447 TPKEEPTMKT SKKGSKKKSG PPAPEEEEEE ERQSGNTEQK SKSKQHRVSR BACU015751/1-1448 TPKEEPTIKT SKKGSKKKPG PSTAEEEEEE ERQSGNTEQK SKSKQHRTSR ENSBTAP00000015410/1-1449 TPKEEPTMKT SKKGSKKKSG PSAAEEEEEE ERQSGNTEQK SKSKQHRTSR 1351 1400 ENSTTRP00000010015/1-1448 RAQQSRAESP ETSAVESIQS TPQKGRGRPS KTPSPSQPPK NVRVGRSKQA bmy_15197T0/1-813 RAQL------ ---------- ---------- ---------- -SRVGRSKQA ENSP00000313851/1-1447 RAQQ-RAESP ESSAIESTQS TPQKGRGRPS KTPSPSQPKK NVRVGRSKQA BACU015751/1-1448 RAQL-RAESP ETSAVESTQS TPQKGRGRPS KTPSPSQPPK NVRVGRSKQA ENSBTAP00000015410/1-1449 RAQQSRAESP DTTAAEPTQS TPQKGRGGPS KTPSPSQPPK KVRVGRSKQA 1401 1450 ENSTTRP00000010015/1-1448 ATKENDSSEE VDVFQGSSPV -DENPQEETE EEEVSAVNV- ---------- bmy_15197T0/1-813 ATKENDSSEE VDVFQGSSPV NDDNPQEETE EEEVSAVNVC AYESAMCNSM ENSP00000313851/1-1447 ATKENDSSEE VDVFQGSSPV -DDIPQEETE EEEVSTVNV- ---------- BACU015751/1-1448 ATKENDSSEE VDVFQVSSPV NDDNPQEETE EEEVSAVNV- ---------- ENSBTAP00000015410/1-1449 ATKENDSSEE IDVFQGSSPV NDENPQEETE EEEVSTVNV- ---------- 1451 1500 ENSTTRP00000010015/1-1448 ---------- ---------- -----RRRSS KRERR----- ---------- bmy_15197T0/1-813 EYRIRVVYSV VSSTGLDSGD YILCENLKPS ENNRCNLVKV YGGEVLKEKG ENSP00000313851/1-1447 ---------- ---------- -----RRRSA KRERR----- ---------- BACU015751/1-1448 ---------- ---------- -----RRRSS KRERR----- ---------- ENSBTAP00000015410/1-1449 ---------- ---------- -----RRRGS KRERR----- ---------- 1501 1550 ENSTTRP00000010015/1-1448 ---------- ---------- ---------- ---------- ---------- bmy_15197T0/1-813 DEQMSLITFY VKALKKIIFC QASGRVKPLM HKMGLLKSGQ LDLTLMTSCI ENSP00000313851/1-1447 ---------- ---------- ---------- ---------- ---------- BACU015751/1-1448 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015410/1-1449 ---------- ---------- ---------- ---------- ---------- 1551 1600 ENSTTRP00000010015/1-1448 ----- bmy_15197T0/1-813 CGHML ENSP00000313851/1-1447 ----- BACU015751/1-1448 ----- ENSBTAP00000015410/1-1449 -----