KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:47 2014 Check: 00 .. Name: BACU016595/1-309 Len: 360 Check: 9907 Weight: 1.00 Name: bmy_07314T0/1-324 Len: 360 Check: 2420 Weight: 1.00 Name: ENSP00000323588/1-317 Len: 360 Check: 915 Weight: 1.00 Name: ENSBTAP00000015411/1-320 Len: 360 Check: 4581 Weight: 1.00 Name: ENSTTRP00000004572/1-314 Len: 360 Check: 2293 Weight: 1.00 // 1 50 BACU016595/1-309 ---------- ---------- ---------- ---------- ---------- bmy_07314T0/1-324 MYNMMETELK PPGPQQTSGG GGGGGGGGGG NSTAAAAGGN QKNSPDRVKR ENSP00000323588/1-317 MYNMMETELK PPGPQQTS-- -----GGGGG NSTAAAAGGN QKNSPDRVKR ENSBTAP00000015411/1-320 MYNMMETELK PPGPQQTS-- --GGGGGGGG NSTAAAAGGN QKNSPDRVKR ENSTTRP00000004572/1-314 MYNMMETELK PPGPQQTS-- -----GGGGG NSTAAAAGGN QKNSPDRVKR 51 100 BACU016595/1-309 -MNAFMVWSR GQRRKMAQEN PKMHNSEISK RLGAEWKLLS ETEKRPFIDE bmy_07314T0/1-324 PMNAFMVWSR GQRRKMAQEN PKMHNSEISK RLGAEWKLLS ETEKRPFIDE ENSP00000323588/1-317 PMNAFMVWSR GQRRKMAQEN PKMHNSEISK RLGAEWKLLS ETEKRPFIDE ENSBTAP00000015411/1-320 PMNAFMVWSR GQRRKMAQEN PKMHNSEISK RLGAEWKLLS ETEKRPFIDE ENSTTRP00000004572/1-314 PMNAFMVWSR GQRRKMAQEN PKMHNSEISK RLGAEWKLLS ETEKRPFIDE 101 150 BACU016595/1-309 AKRLRALHMK EHPDYKYRPR RKTKTLMKKD KYRRAGGLLA PGGNSMASGV bmy_07314T0/1-324 AKRLRALHMK EHPDYKYRPR RKTKTLMKKD KYTLPGGLLA PGGNSMASGV ENSP00000323588/1-317 AKRLRALHMK EHPDYKYRPR RKTKTLMKKD KYTLPGGLLA PGGNSMASGV ENSBTAP00000015411/1-320 AKRLRALHMK EHPDYKYRPR RKTKTLMKKD KYTLPGGLLA PGGNSMASGV ENSTTRP00000004572/1-314 AKRLRALHMK EHPDYKYRPR RKTKTLMKKD KYTLPGGLLA PGGNSMASGV 151 200 BACU016595/1-309 GVGAGLGAGV NQRMDSYAHM NGWSNGSYSM MQDQLGYPQH PGLNAHGAAQ bmy_07314T0/1-324 GVGAGLGAGV NQRMDSYAHM NGWSNGSYSM MQDQLGYPQH PGLNAHGAAQ ENSP00000323588/1-317 GVGAGLGAGV NQRMDSYAHM NGWSNGSYSM MQDQLGYPQH PGLNAHGAAQ ENSBTAP00000015411/1-320 GVGAGLGAGV NQRMDSYAHM NGWSNGSYSM MQDQLGYPQH PGLNAHGAAQ ENSTTRP00000004572/1-314 GVGAGLGAGV NQRMDSYAHM NGWSNGSYSM MQDQLGYPQH PGLNAHGAAQ 201 250 BACU016595/1-309 MQPMHRYDVS ALQYNSMTSS QTYMNGSPTY SMSYSQQGTP GMALGSMGSV bmy_07314T0/1-324 MQPMHRYDVS ALQYNSMTSS QTYMNGSPTY SMSYSQQGTP GMALGSMGSV ENSP00000323588/1-317 MQPMHRYDVS ALQYNSMTSS QTYMNGSPTY SMSYSQQGTP GMALGSMGSV ENSBTAP00000015411/1-320 MQPMHRYDVS ALQYNSMTSS QTYMNGSPTY SMSYSQQGTP GMALGSMGSV ENSTTRP00000004572/1-314 MQPMHRYDVS ALQYNSMTSS QTYMNGSP-Y SMSYSQQG-P GMA-GSMGSV 251 300 BACU016595/1-309 VKSEASSSPP VVTSSSHSRA PCQAGDLRDM ISMYLPGAEV PEPAAPSRLH bmy_07314T0/1-324 VKSEASSSPP VVTSSSHSRA PCQAGDLRDM ISMYLPGAEV PEPAAPSRLH ENSP00000323588/1-317 VKSEASSSPP VVTSSSHSRA PCQAGDLRDM ISMYLPGAEV PEPAAPSRLH ENSBTAP00000015411/1-320 VKSEASSSPP VVTSSSHSRA PCQAGDLRDM ISMYLPGAEV PEPAAPSRLH ENSTTRP00000004572/1-314 VKSEASSSPP VVTSSSHSRA PCQAGDLRDM ISMYLPGAEV PEPAAPSRLH 301 350 BACU016595/1-309 MSQHYQSGPV PGTAINGTLP LSHIKKDKLL EYPVTVVTAK KILLKFEEDA bmy_07314T0/1-324 MSQHYQSGPV PGTAINGTLP LSHM------ ---------- ---------- ENSP00000323588/1-317 MSQHYQSGPV PGTAINGTLP LSHM------ ---------- ---------- ENSBTAP00000015411/1-320 MSQHYQSGPV PGTAINGTLP LSHM------ ---------- ---------- ENSTTRP00000004572/1-314 MSQHYQSGPV PGTAINGTLP LSHM------ ---------- ---------- 351 400 BACU016595/1-309 TLKVLFSPGK bmy_07314T0/1-324 ---------- ENSP00000323588/1-317 ---------- ENSBTAP00000015411/1-320 ---------- ENSTTRP00000004572/1-314 ----------