KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:55:48 2014 Check: 00 .. Name: ENSP00000341905/1-1011 Len: 1076 Check: 972 Weight: 1.00 Name: ENSBTAP00000015416/1-1012 Len: 1076 Check: 365 Weight: 1.00 Name: bmy_19200T0/1-1068 Len: 1076 Check: 7659 Weight: 1.00 Name: BACU004857/1-444 Len: 1076 Check: 2873 Weight: 1.00 // 1 50 ENSP00000341905/1-1011 ---------- ---------- ---MDPPSPS RTSQTQPTAT SPLTSYRWHT ENSBTAP00000015416/1-1012 ---------- ---------- ---MDPPSPS RASQTQPVAP SPLTSYRWHS bmy_19200T0/1-1068 MKTTCGQTPG RIVTLSSPRR ISAMDPPSPS LASQTQPAAP SPLTSYHWHS BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000341905/1-1011 GGGGEKAAGG FRWGRFAGWG RALSHQEPMV STQPAPRSIF RRVLSAPPKE ENSBTAP00000015416/1-1012 GGGAEKGAGG FRWGRLAGWG RAQSHQETTA SSQPAPRSLF RRVLSAPPKE bmy_19200T0/1-1068 GGCGEKGAGG FRWGRLAGWG RALSHQEPTV SSQPAPRSLF RRVLSAPPKE BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000341905/1-1011 SRTSRLRLSK ALWGRHKNPP PEPDPEPEQE APELEPEPEL EPPTPQIPEA ENSBTAP00000015416/1-1012 SRTSRLKISK SLWGKNKSPP LDSEPEPENP ----EPEPEL EPLATQIPEA bmy_19200T0/1-1068 SRSSRLRISK TLWGRHKSPP LESEPEPETS ----EPEPEL EPPAPQIPEA BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000341905/1-1011 PTPNVPVWDI GGFTLLDGKL VLLGGEEEGP RRPRVGSASS EGSIHVAMGN ENSBTAP00000015416/1-1012 PTPDVPVWNI EAFTLLDGKL VLLGNEDEGP RQPRMGSASS ESSIHVASGN bmy_19200T0/1-1068 PPPDVPVWNI GAFTLLDGRL VLLGGEEEHP RRPRVGSASS EGSIQVALGN BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000341905/1-1011 FRDPDRMPGK TEPETAGPNQ VHNVRGLLKR LKEKKKARLE -----PRDGP ENSBTAP00000015416/1-1012 LKDPDRTPGK TDPEAAGPHQ IHNVRGLLKR LKEKKKAKSE LGASASRDGP bmy_19200T0/1-1068 LRDPDRTSGK TEPEAAGPNQ VHNIRGLLKR LKEKKKAKSE LGANASQDGP BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000341905/1-1011 PSALGSRESL ATLSELDLGA ERDVRIWPLH PSLLGEPHCF QVTWTGGSRC ENSBTAP00000015416/1-1012 PSALGSRESL ATISELDLGA ERDVRVWPLH PSLLEEPHCF QVTWAGGSRC bmy_19200T0/1-1068 PSALGSRESL ATLSELDLGA ERDVRVWPLH PSLLEEPHCF QVTWAGGSRC BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000341905/1-1011 FSCRSAAERD RWIEDLRRQF QPT------- ---------- ---------- ENSBTAP00000015416/1-1012 FSCRSAAERD RWIEDLRRHF QPS------- ---------- ---------- bmy_19200T0/1-1068 FSCRSAAERD RWIEDIRRHF QPSQGPSDPL GARAPCFTSG AQCGAQTPRS BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000341905/1-1011 ------QDNV EREETWLSVW VHEAKGLPRA AAGAPGVRAE LWLDGALLAR ENSBTAP00000015416/1-1012 ------QDNV EREETWLSVW VHEVKGLPRA AAAAPGVRTE LWLDGALLAR bmy_19200T0/1-1068 RPYSGPQDNI EREETWLSVW VHEVKGLPRA AAGAPGVRAE LWLDGALLAR BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000341905/1-1011 TAPRAGPGQL FWAERFHFEA LPPARRLSLR LRGLGPGSAV LGRVALALEE ENSBTAP00000015416/1-1012 TTPRAGPGQL FWAERFHFEA LPPARRLSLR LRGAGPGDAV LGRVALALEE bmy_19200T0/1-1068 TTPRAGPGQL FWAERFHFEA LPPARRLSLR LRGAGPGDAV LGRVALALEE BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000341905/1-1011 LDAPRAPAAG LERWFPLLGA PAGAALRARI RARRLRVLPS ERYKELAEFL ENSBTAP00000015416/1-1012 LGIPRAPAAG LERWFPLLGA PAGAALRARI RARRLRVLPS ERYKELAEFL bmy_19200T0/1-1068 LGVPRAPAAG LERWFPLLGA PAGAALRARI RARRLRVLPS ERYKELAEFL BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000341905/1-1011 TFHYARLCGA LEPALPAQAK EELAAAMVRV LRATGRAQAL VTDLGTAELA ENSBTAP00000015416/1-1012 TFHYARLCGA LELALSAQAK EELAAAMVRV LRATGRAQAL VTDLGTAELA bmy_19200T0/1-1068 TFHYARLCGA LELALSAQAK EELAAAMVRV LRATGRAQAL VTDLGTAELA BACU004857/1-444 ---------- ---------- ------MVRV LRATGRAQAL VTDLGTAELA 551 600 ENSP00000341905/1-1011 RCGGREALLF RENTLATKAI DEYMKLVAQD YLQETLGQVV RRLCASTEDC ENSBTAP00000015416/1-1012 RSGGREALLF RENTLATKAI DEYMKLVAQD YLQETLGQVV RRLCASTEDC bmy_19200T0/1-1068 RSGGREALLF RENTLATKAI DEYMKLVAQD YLQKTLGQVV RRLCASTEDC BACU004857/1-444 RSGGREALLF RENTLATKAI DEYMKLVAQD YLQKTLGQVV RRLCASTEDC 601 650 ENSP00000341905/1-1011 EVDPSKCPAS ELPEHQARLR NSCEEVFETI IHSYDWFPAE LGIVFSSWRE ENSBTAP00000015416/1-1012 EVDPSKCPAS DLPQHQSRLR NSCKEVFENI IHSYNWFPAE LGTVFSGWRE bmy_19200T0/1-1068 EVNPSKCPAS ELPQRQIRLR NSCKEVFENI VHSCDWFPAE LGTVFSGWRE BACU004857/1-444 EVNPSKCPAS ELPQRQIRLR NSCKEVFENI IHSCDWFPAE LGTVFSGWRE 651 700 ENSP00000341905/1-1011 ACKERGSEVL GPRLVCASLF LRLLCPAILA PSLFGLAPDH PAPGPARTLT ENSBTAP00000015416/1-1012 ACKARGSEAL GPRLVCASLF LRLLCPAILS PSLFGLALEH PAPGPARTLT bmy_19200T0/1-1068 ACKARGSEAL GPRLVCASLF LRLLCPAILS PSLFGLAPEH PAPGPARTLT BACU004857/1-444 ACKARGSEAL GPRLVCASLF LRLLCPAILS PSLFGLAPEH PAPGPARTLT 701 750 ENSP00000341905/1-1011 LIAKVIQNLA NRAPFGEKEA YMGFMNSFLE EHGPAMQCFL DQVAMVDVDA ENSBTAP00000015416/1-1012 LIAKVIQNLA NRAPFGEKEA YMSFMNTFLE DHGPAMQHFL DQVATVDADT bmy_19200T0/1-1068 LIAKVIQNLA NHAPFGEKEA YMSFMNSFLE DHGPAMQRFL DQVAMVDVHT BACU004857/1-444 LIAKVIQNLA NHAPFGEKEA YMSFMNSFLE DHGPAMQRFL DQVAMVDVHT 751 800 ENSP00000341905/1-1011 APSGYQGSGD LALQLAVLHA QLCTIFAELD QTTRDTLEPL PTILRAIEEG ENSBTAP00000015416/1-1012 APSGYQGSSD LALQLAVLHA QLCTIFAELD QATRDNLEPL PTILHAIEEG bmy_19200T0/1-1068 APSGYQGSSD LALQLAVLHA QLCTIFAELD QATRDSLEPL PTILSAIEEG BACU004857/1-444 APSGYQGSSD LALQLAVLHA QLCTIFAELD QATRDSLEPL PTILGAIEEG 801 850 ENSP00000341905/1-1011 QPVLVSVPMR LPLPPAQVHS SLSAGEKPGF LAPRDLPKHT PLISKSQSLR ENSBTAP00000015416/1-1012 RPVPVTVPMC LPAPRTQGHS SISAGEKPGF LAPRDLPKHT PLISKSQSLR bmy_19200T0/1-1068 RPVPVSVPMR LPPPPVQVHS SISAGEKPGF LAPRDLPKHT PLISKSQSLR BACU004857/1-444 RPVPVSVPMR LPPPLVQVHS SISAGEKPGF LAPRDLPKHT PLISKSQSLR 851 900 ENSP00000341905/1-1011 SVRRSESWAR PRPDEERPLR RPRPVQRTQS VPVRRPARRR QSAGPWPRPK ENSBTAP00000015416/1-1012 SVHGAGSWAR PRLEEEQPPR LPRPVKRTQS VPAGRPARRR PSAGPRPRPK bmy_19200T0/1-1068 SVHGAGSWAR PRPDEEQPPR LPRPVQRTQS VPAGRPARHR PSAGPRPRPK BACU004857/1-444 SVHGAGSWAR PRPDEEQPPQ LPRPVQRTQS VPAGRPARHR PSAGPRPRPK 901 950 ENSP00000341905/1-1011 GSLSMGPAPR ARPWTRDSAS LPRKPSVPWQ RQMDQPQDRN QALGTHRPVN ENSBTAP00000015416/1-1012 GSLHAGPAPR GRPWTGASAS LPRKPSVPWQ RQMDQPRDKD QALGTHRPVG bmy_19200T0/1-1068 GSLRTGPVPR GRPWTGTSAS LPRKPSVPWQ RQLDQPRDRD QTLGTHRPMG BACU004857/1-444 GSLRTGPVPR GRPWTGTSAS LPRKPSVPWQ RQLDQPRDRD QTLGTHRPMG 951 1000 ENSP00000341905/1-1011 KLAELQCEVA ALREEQKVLS RLVESLSTQI RALTEQQEQL RGQLQDLDSR ENSBTAP00000015416/1-1012 KLAELQCEVA ALRQDLKMLS GLVESLSTHI RSLSEQQEQL RTQLQLLDSR bmy_19200T0/1-1068 KMTELQCEVA ALRQDQKALS GLVESLGTHI RALSEQQEQL RSQLQNLATR BACU004857/1-444 KVRD------ ---------- ---------- ---------- ---------- 1001 1050 ENSP00000341905/1-1011 LRAGSSEFDS EHNLTSNEGH SLKNLEHRLN EMERTQAQLR DAVQSLQLSP ENSBTAP00000015416/1-1012 LREGTAKLDP GRDRSTNEGH RLKSLECRLA EIESTQAQLK DTIQNLQLLP bmy_19200T0/1-1068 LREGTAKLDP ERDPPTNEGH RLKSLECRLA EIESTQAQLR ESIQSLQLLP BACU004857/1-444 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000341905/1-1011 RTRGSWSQPQ PLKAPCLNGD TT---- ENSBTAP00000015416/1-1012 RTSESQSQPV PLKAPCINGD TT---- bmy_19200T0/1-1068 RTSGSQSQPL PLKAPCINGD TT---- BACU004857/1-444 -------SPG P---PAQSGE TGLEKD