KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:49 2014 Check: 00 .. Name: BACU011108/1-139 Len: 540 Check: 1085 Weight: 1.00 Name: ENSTTRP00000006706/1-457 Len: 540 Check: 3413 Weight: 1.00 Name: ENSP00000385632/1-482 Len: 540 Check: 142 Weight: 1.00 Name: bmy_17862T0/1-344 Len: 540 Check: 596 Weight: 1.00 Name: ENSBTAP00000015427/1-457 Len: 540 Check: 8208 Weight: 1.00 // 1 50 BACU011108/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006706/1-457 ---------- ---------- ------MGIT LIWCLALVLI KWIASKRRGA ENSP00000385632/1-482 MEVCYQLPVL PLDRPVPQHV LSRRGAISFS SSSALFGCPN PRQLSQRRGA bmy_17862T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015427/1-457 ---------- ---------- ------MGIT LIWCLALVLI KWVASKRRGA 51 100 BACU011108/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006706/1-457 ISYDSSDQTA LYIRMLGDVR VRSRAGFESE RRGSHPYIDF RIFHAQSEIE ENSP00000385632/1-482 ISYDSSDQTA LYIRMLGDVR VRSRAGFESE RRGSHPYIDF RIFHSQSEIE bmy_17862T0/1-344 ---------- ---------- ---MHSFESL YSPFTPFIS- ----AQSEIE ENSBTAP00000015427/1-457 ISYDSSDQTA LYIRMLGDVR VRSRAGFESE RRGSHPYIDF RIFHAQSEIE 101 150 BACU011108/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006706/1-457 VSVSARNIRR LLSFQRYLRS SRFFRGTSVS NSLNILDDDY NGQAKCMLEK ENSP00000385632/1-482 VSVSARNIRR LLSFQRYLRS SRFFRGTAVS NSLNILDDDY NGQAKCMLEK bmy_17862T0/1-344 VSVSARNIRR LLSFQRYLRS SRFFRGTSVS NSLNILDDDY NGQAKCMLEK ENSBTAP00000015427/1-457 VSVSARNIRR LLSFQRYLRS SRFFRGTTVS NSLNILDDDY NGQAKCMLEK 151 200 BACU011108/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006706/1-457 VGNWNFDIFL FDRLTNGNSL VSLTFHLFSL HGLIEYFHLD XXXXXXXXXM ENSP00000385632/1-482 VGNWNFDIFL FDRLTNGNSL VSLTFHLFSL HGLIEYFHLD MMKLRRFLVM bmy_17862T0/1-344 VGNWNFDIFL FDRLTNGNSL VSLTFHLFSL HGLIEYFHLD MMKLRRFL-- ENSBTAP00000015427/1-457 VGNWNFDIFL FDRLTNGNSL VSLTFHLFSL HGLIEYFHLD MMKLRRFLVM 201 250 BACU011108/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006706/1-457 IQEDYHSQNP YHNAVHAADV TQAMHCYLKE PKLANSVTPW DVLLSLIAAA ENSP00000385632/1-482 IQEDYHSQNP YHNAVHAADV TQAMHCYLKE PKLANSVTPW DILLSLIAAA bmy_17862T0/1-344 ---------- ---------- ---------- ---------- --------AA ENSBTAP00000015427/1-457 IQEDYHSQNP YHNAVHAADV TQAMHCYLKE PKLANSVTPW DVLLSLIAAA 251 300 BACU011108/1-139 ---------- ---------- ---------- ---------- -----MGYVC ENSTTRP00000006706/1-457 THDLDHPGVN QPFLIKTNHY LATLYKNTSV LENHHWRSAV GLLRESGLFS ENSP00000385632/1-482 THDLDHPGVN QPFLIKTNHY LATLYKNTSV LENHHWRSAV GLLRESGLFS bmy_17862T0/1-344 THDLDHPGVN QPFLIKTNHY LATLYKNTSV LENHHWRSAV GLLRESGLFS ENSBTAP00000015427/1-457 THDLDHPGVN QPFLIKTNHY LATLYKNTSV LENHHWRSAV GLLRESGLFS 301 350 BACU011108/1-139 QFTFTSR--- ---------- ---------- ---------- ---------- ENSTTRP00000006706/1-457 HMPLESRQQM EAQIGALILA TDISRQNEYL SLFRAHLDKG DLHLEDIRHR ENSP00000385632/1-482 HLPLESRQQM ETQIGALILA TDISRQNEYL SLFRSHLDRG DLCLEDTRHR bmy_17862T0/1-344 HMPLESRQQM EAQIGALILA TDISRQNEYL SLFRAHLDKG DLRLEDARHR ENSBTAP00000015427/1-457 HMPLESRQQM EAQIGALILA TDISRQNEYL SLFRAHLDKG DLHLEDARHR 351 400 BACU011108/1-139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006706/1-457 HLVLQMALKC ADICNPCRTW ELSKQWSEKV TEEFFHQXXX XXXXXXXXXX ENSP00000385632/1-482 HLVLQMALKC ADICNPCRTW ELSKQWSEKV TEEFFHQGDI EKKYHLGVSP bmy_17862T0/1-344 HLVLQMALKC ADICNPCRTW ELSKQWR--- --------DV EKKYHLAVSP ENSBTAP00000015427/1-457 HLVLQMALKC ADICNPCRTW ELSKQWSEKV TEEFFHQGDI EKKYHLGVSP 401 450 BACU011108/1-139 ---------- ---FSFMTYL VEPLFTEWAR FSNTRLSQTM LGHVGLNKAS ENSTTRP00000006706/1-457 XXXXXXXXXX XXXXXFMTYL VEPLFTEWAR FSNTRLSQTM LGHVGLNKAS ENSP00000385632/1-482 LCDRHTESIA NIQIGFMTYL VEPLFTEWAR FSNTRLSQTM LGHVGLNKAS bmy_17862T0/1-344 LCDRQTESIA NIQIGFMTYL VEPLFTEWAR FSNSRLSQTM LGHVGLNKAS ENSBTAP00000015427/1-457 LCDRQTESIA NIQIGFMTYL VEPLFTEWAR FSNTRLSQTM LGHVGLNKAS 451 500 BACU011108/1-139 WKGLQREQSS SEVTGGRLPL EVVRNVNGVL RAGPADTRLW TTVPLNEVTD ENSTTRP00000006706/1-457 WKGLQREQSS SEDADAAF-- ---EELNSQL L--PQENRLS ---------- ENSP00000385632/1-482 WKGLQREQSS SEDTDAAF-- ----ELNSQL L--PQENRLS ---------- bmy_17862T0/1-344 WKGLQREQSS SEDTGAAF-- ---EELNSQL L--PQENRLS ---------- ENSBTAP00000015427/1-457 WKGLQREQPS SEDADAAF-- ---EELSSQL L--PQENRLP ---------- 501 550 BACU011108/1-139 ALPGAASPRL LDWHIQQTRQ TFSLASAEPD LPAYDCFLLL ENSTTRP00000006706/1-457 ---------- ---------- ---------- ---------- ENSP00000385632/1-482 ---------- ---------- ---------- ---------- bmy_17862T0/1-344 ---------- ---------- ---------- ---------- ENSBTAP00000015427/1-457 ---------- ---------- ---------- ----------